Experiment set6IT077 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Ammonium chloride

200 most important genes:

  gene name fitness t score description  
MMP_RS07345 -5.4 -11.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS03315 -4.8 -2.0 ferrous iron transport protein A compare
MMP_RS05500 -4.8 -10.6 2-isopropylmalate synthase compare
MMP_RS08300 -4.3 -2.6 metal-sulfur cluster assembly factor compare
MMP_RS07730 -4.3 -3.6 pyruvate synthase subunit beta compare
MMP_RS08790 -4.2 -4.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS01020 -4.2 -1.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS04215 -4.1 -13.8 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS01455 -4.1 -9.6 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS03450 -4.1 -3.8 glycine synthesis protein GlyXS (from data) compare
MMP_RS07845 -4.1 -4.6 LL-diaminopimelate aminotransferase compare
MMP_RS04710 -4.0 -3.1 hypothetical protein compare
MMP_RS08720 -3.9 -3.1 4Fe-4S binding protein compare
MMP_RS01175 -3.9 -9.7 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03600 -3.8 -4.2 triose-phosphate isomerase compare
MMP_RS06375 -3.8 -7.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07635 -3.8 -11.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07185 -3.7 -16.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01005 -3.6 -2.1 riboflavin synthase compare
MMP_RS08715 -3.5 -3.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06355 -3.5 -5.4 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07390 -3.5 -4.8 cell division protein FtsZ compare
MMP_RS01385 -3.4 -1.2 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08165 -3.3 -2.9 phosphoglycerate dehydrogenase compare
MMP_RS03035 -3.3 -6.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03435 -3.3 -3.5 ketol-acid reductoisomerase compare
MMP_RS06975 -3.3 -4.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06270 -3.3 -8.0 TIGR00300 family protein compare
MMP_RS03015 -3.3 -14.2 GTP 3' 8-cyclase MoaA compare
MMP_RS05515 -3.3 -12.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06400 -3.2 -2.5 4Fe-4S binding protein compare
MMP_RS04615 -3.2 -7.2 PDGLE domain-containing protein compare
MMP_RS07955 -3.1 -6.7 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS05265 -3.1 -4.1 2-isopropylmalate synthase compare
MMP_RS04605 -3.1 -6.5 cobalt ECF transporter T component CbiQ compare
MMP_RS02240 -3.1 -5.4 methanogenesis marker 7 protein compare
MMP_RS04620 -3.0 -15.8 cobalt transporter CbiM compare
MMP_RS03390 -3.0 -10.6 malate dehydrogenase compare
MMP_RS01500 -3.0 -3.3 CBS domain-containing protein compare
MMP_RS06370 -2.9 -8.7 biotin synthase BioB compare
MMP_RS08745 -2.9 -7.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03700 -2.9 -11.1 sodium:proton antiporter compare
MMP_RS02010 -2.9 -11.8 PHP domain-containing protein compare
MMP_RS07600 -2.9 -4.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07735 -2.9 -1.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS02145 -2.9 -11.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS00040 -2.8 -7.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01755 -2.8 -2.5 DUF2097 domain-containing protein compare
MMP_RS03580 -2.7 -4.6 signal recognition particle-docking protein FtsY compare
MMP_RS07380 -2.7 -3.2 transcription elongation factor Spt5 compare
MMP_RS04500 -2.7 -18.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS01265 -2.7 -2.6 hypothetical protein compare
MMP_RS01545 -2.7 -1.9 CBS domain-containing protein compare
MMP_RS00695 -2.5 -1.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05845 -2.5 -2.9 tRNA-intron lyase compare
MMP_RS05555 -2.5 -2.3 DUF4040 domain-containing protein compare
MMP_RS01830 -2.5 -2.4 tRNA-Val compare
MMP_RS06350 -2.5 -10.2 HesA/MoeB/ThiF family protein compare
MMP_RS08435 -2.5 -3.0 Era-like GTP-binding protein compare
MMP_RS08095 -2.4 -9.2 dethiobiotin synthase compare
MMP_RS06895 -2.4 -1.7 selenocysteine-specific translation elongation factor compare
MMP_RS01795 -2.4 -2.8 methanogenesis marker 6 protein compare
MMP_RS00305 -2.4 -2.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS06120 -2.4 -3.5 UPF0147 family protein compare
MMP_RS01665 -2.4 -4.9 DUF2111 domain-containing protein compare
MMP_RS04090 -2.4 -3.1 hypothetical protein compare
MMP_RS00750 -2.3 -3.7 fumarate hydratase compare
MMP_RS06285 -2.3 -3.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07630 -2.3 -1.9 ATP-binding cassette domain-containing protein compare
MMP_RS07555 -2.3 -1.2 monovalent cation/H+ antiporter subunit E compare
MMP_RS05925 -2.3 -5.4 small nuclear ribonucleoprotein compare
MMP_RS03445 -2.3 -1.7 methanogenesis marker 17 protein compare
MMP_RS00685 -2.2 -5.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS09020 -2.2 -2.7 hypothetical protein compare
MMP_RS05425 -2.2 -5.9 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS06625 -2.2 -2.9 DNA primase compare
MMP_RS00300 -2.2 -1.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05920 -2.2 -1.0 50S ribosomal protein L37e compare
MMP_RS08210 -2.2 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS08330 -2.1 -5.8 NADH-quinone oxidoreductase subunit H compare
MMP_RS01225 -2.1 -7.4 DUF5379 domain-containing protein compare
MMP_RS06295 -2.1 -9.0 methanogenesis marker 14 protein compare
MMP_RS06940 -2.0 -3.4 polyprenyl diphosphate synthase compare
MMP_RS06475 -2.0 -5.0 FAD-dependent oxidoreductase compare
MMP_RS04790 -2.0 -10.0 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS06885 -2.0 -3.2 50S ribosome-binding GTPase compare
MMP_RS05930 -2.0 -2.3 3-isopropylmalate dehydratase large subunit compare
MMP_RS00060 -2.0 -3.6 3-dehydroquinate synthase II compare
MMP_RS02345 -1.9 -4.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07545 -1.9 -1.9 HTH domain-containing protein compare
MMP_RS03250 -1.9 -4.1 MJ1244 family protein compare
MMP_RS02135 -1.9 -5.8 DUF5612 domain-containing protein compare
MMP_RS06630 -1.9 -1.5 UPF0058 family protein compare
MMP_RS03025 -1.9 -6.3 molybdenum cofactor guanylyltransferase compare
MMP_RS02235 -1.9 -8.8 CBS domain-containing protein compare
MMP_RS08635 -1.8 -2.7 UbiA family prenyltransferase compare
MMP_RS03960 -1.8 -1.7 hypothetical protein compare
MMP_RS08100 -1.8 -8.3 8-amino-7-oxononanoate synthase compare
MMP_RS00110 -1.8 -4.1 hypothetical protein compare
MMP_RS01610 -1.8 -4.1 hypothetical protein compare
MMP_RS01725 -1.8 -5.1 class I SAM-dependent methyltransferase family protein compare
MMP_RS01800 -1.8 -5.0 TIGR00303 family protein compare
MMP_RS07420 -1.8 -5.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08105 -1.8 -9.6 6-carboxyhexanoate--CoA ligase compare
MMP_RS08650 -1.8 -4.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06020 -1.7 -5.8 archaeoflavoprotein AfpA compare
MMP_RS04890 -1.7 -1.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01220 -1.7 -7.7 hypothetical protein compare
MMP_RS02195 -1.7 -5.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02355 -1.7 -3.9 30S ribosomal protein S27ae compare
MMP_RS02900 -1.7 -0.9 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07365 -1.7 -10.3 2-phosphoglycerate kinase compare
MMP_RS04900 -1.7 -13.6 hypothetical protein compare
MMP_RS07710 -1.7 -8.7 cell division protein FtsZ compare
MMP_RS07755 -1.6 -1.8 DUF555 domain-containing protein compare
MMP_RS06230 -1.6 -3.5 helix-turn-helix domain-containing protein compare
MMP_RS06340 -1.6 -8.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07200 -1.6 -7.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS02280 -1.6 -1.3 DUF211 domain-containing protein compare
MMP_RS06725 -1.6 -10.1 hypothetical protein compare
MMP_RS07750 -1.6 -3.7 DUF357 domain-containing protein compare
MMP_RS08440 -1.6 -2.9 cell division protein SepF compare
MMP_RS05345 -1.6 -6.8 hypothetical protein compare
MMP_RS00515 -1.6 -1.3 DUF655 domain-containing protein compare
MMP_RS03475 -1.5 -0.9 hypothetical protein compare
MMP_RS08195 -1.5 -7.7 hypothetical protein compare
MMP_RS01380 -1.5 -5.7 PHP domain-containing protein compare
MMP_RS04585 -1.5 -8.4 AIR synthase related protein compare
MMP_RS01700 -1.5 -1.1 dihydroxy-acid dehydratase compare
MMP_RS07645 -1.5 -6.5 aldehyde dehydrogenase family protein compare
MMP_RS07005 -1.5 -0.9 4Fe-4S binding protein compare
MMP_RS05550 -1.5 -1.0 cation:proton antiporter compare
MMP_RS04775 -1.5 -3.6 adenosylhomocysteinase compare
MMP_RS00730 -1.5 -5.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06840 -1.4 -1.2 DNA-directed RNA polymerase subunit N compare
MMP_RS02875 -1.4 -6.9 chorismate pyruvate-lyase family protein compare
MMP_RS03140 -1.4 -8.7 hypothetical protein compare
MMP_RS05815 -1.4 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01325 -1.4 -2.8 dihydroneopterin aldolase family protein compare
MMP_RS06395 -1.4 -4.9 ThiF family adenylyltransferase compare
MMP_RS06900 -1.4 -2.6 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00725 -1.4 -4.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08320 -1.4 -5.3 molybdopterin molybdotransferase MoeA compare
MMP_RS07605 -1.4 -3.4 diadenylate cyclase compare
MMP_RS02245 -1.3 -5.0 hypothetical protein compare
MMP_RS07540 -1.3 -3.6 CBS domain-containing protein compare
MMP_RS07090 -1.3 -6.2 tRNA (adenine-N1)-methyltransferase compare
MMP_RS05540 -1.3 -2.8 hypothetical protein compare
MMP_RS05430 -1.3 -4.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS07695 -1.3 -8.2 DUF3236 domain-containing protein compare
MMP_RS04955 -1.3 -4.8 DNA topoisomerase I compare
MMP_RS04850 -1.3 -10.3 UPF0254 family protein compare
MMP_RS05460 -1.3 -7.7 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS07705 -1.3 -6.9 transcriptional regulator compare
MMP_RS02800 -1.3 -4.3 nucleotidyltransferase domain-containing protein compare
MMP_RS05250 -1.2 -1.9 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04780 -1.2 -2.2 ribonuclease P compare
MMP_RS07525 -1.2 -6.1 4Fe-4S binding protein compare
MMP_RS07355 -1.2 -1.3 transcription factor S compare
MMP_RS01440 -1.2 -6.1 NAAT family transporter compare
MMP_RS00810 -1.2 -6.2 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00315 -1.2 -6.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03080 -1.2 -3.3 universal stress protein compare
MMP_RS04485 -1.1 -8.5 putative beta-lysine N-acetyltransferase compare
MMP_RS08460 -1.1 -2.3 proteasome-activating nucleotidase compare
MMP_RS03485 -1.1 -3.8 TIGR00267 family protein compare
MMP_RS00735 -1.1 -2.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04685 -1.1 -2.0 DUF126 domain-containing protein compare
MMP_RS03640 -1.1 -3.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06730 -1.1 -1.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS06925 -1.1 -2.5 ribonuclease VapC4 compare
MMP_RS03145 -1.1 -5.5 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00985 -1.1 -3.4 CDC48 family AAA ATPase compare
MMP_RS00915 -1.1 -4.6 DUF116 domain-containing protein compare
MMP_RS02930 -1.1 -2.4 class I SAM-dependent methyltransferase compare
MMP_RS07575 -1.1 -2.3 RNA ligase partner protein compare
MMP_RS00720 -1.1 -6.1 metal-dependent hydrolase compare
MMP_RS02340 -1.0 -1.7 DNA-directed RNA polymerase subunit E'' compare
MMP_RS06105 -1.0 -5.7 hydrogenase maturation peptidase HycI compare
MMP_RS01600 -1.0 -2.0 50S ribosomal protein L15e compare
MMP_RS01975 -1.0 -8.3 hypothetical protein compare
MMP_RS06670 -1.0 -4.4 glucose-6-phosphate isomerase compare
MMP_RS01880 -1.0 -4.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05245 -1.0 -6.3 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07075 -1.0 -2.8 phosphomannomutase/phosphoglucomutase compare
MMP_RS08000 -1.0 -7.0 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMP_RS01875 -1.0 -6.1 N-acetyltransferase compare
MMP_RS01885 -1.0 -5.0 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00900 -1.0 -2.2 50S ribosomal protein L39e compare
MMP_RS07700 -0.9 -6.5 DUF1188 domain-containing protein compare
MMP_RS05280 -0.9 -5.9 COG1361 S-layer family protein compare
MMP_RS05640 -0.9 -3.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05850 -0.9 -2.2 Ldh family oxidoreductase compare
MMP_RS03400 -0.9 -1.8 archease compare
MMP_RS03095 -0.9 -4.9 diphthine synthase compare
MMP_RS04870 -0.9 -4.3 TIGR02253 family HAD-type hydrolase compare
MMP_RS04785 -0.9 -6.1 hypothetical protein compare
MMP_RS01195 -0.9 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07410 -0.9 -5.7 4-demethylwyosine synthase TYW1 compare
MMP_RS05285 -0.9 -4.6 MMPL family transporter compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms