Experiment set6IT075 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Ammonium chloride

200 most important genes:

  gene name fitness t score description  
MMP_RS07345 -4.9 -10.0 glycine synthesis protein GlyXL (from data) compare
MMP_RS03315 -4.8 -2.0 ferrous iron transport protein A compare
MMP_RS05550 -4.8 -1.2 cation:proton antiporter compare
MMP_RS05500 -4.7 -12.5 2-isopropylmalate synthase compare
MMP_RS08165 -4.6 -4.7 phosphoglycerate dehydrogenase compare
MMP_RS01175 -4.6 -9.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03450 -4.5 -3.8 glycine synthesis protein GlyXS (from data) compare
MMP_RS07005 -4.4 -1.1 4Fe-4S binding protein compare
MMP_RS05920 -4.3 -1.1 50S ribosomal protein L37e compare
MMP_RS03435 -4.2 -3.1 ketol-acid reductoisomerase compare
MMP_RS01455 -4.2 -10.9 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS04605 -4.2 -8.8 cobalt ECF transporter T component CbiQ compare
MMP_RS00750 -4.2 -4.5 fumarate hydratase compare
MMP_RS05555 -3.9 -2.3 DUF4040 domain-containing protein compare
MMP_RS01545 -3.9 -1.9 CBS domain-containing protein compare
MMP_RS03015 -3.9 -13.4 GTP 3' 8-cyclase MoaA compare
MMP_RS04615 -3.9 -6.4 PDGLE domain-containing protein compare
MMP_RS03600 -3.9 -3.9 triose-phosphate isomerase compare
MMP_RS05930 -3.8 -3.7 3-isopropylmalate dehydratase large subunit compare
MMP_RS04215 -3.8 -10.4 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS07635 -3.8 -11.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06355 -3.7 -4.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07185 -3.7 -14.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07555 -3.7 -1.3 monovalent cation/H+ antiporter subunit E compare
MMP_RS05515 -3.6 -9.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00300 -3.5 -1.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06375 -3.5 -6.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07845 -3.4 -4.5 LL-diaminopimelate aminotransferase compare
MMP_RS06975 -3.4 -4.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS08300 -3.3 -2.0 metal-sulfur cluster assembly factor compare
MMP_RS00515 -3.3 -1.6 DUF655 domain-containing protein compare
MMP_RS07735 -3.3 -1.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS04620 -3.2 -16.5 cobalt transporter CbiM compare
MMP_RS04890 -3.2 -1.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03035 -3.2 -6.9 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06350 -3.2 -8.2 HesA/MoeB/ThiF family protein compare
MMP_RS02010 -3.1 -14.0 PHP domain-containing protein compare
MMP_RS01005 -3.1 -2.4 riboflavin synthase compare
MMP_RS06370 -3.0 -10.0 biotin synthase BioB compare
MMP_RS03390 -3.0 -8.9 malate dehydrogenase compare
MMP_RS00040 -3.0 -6.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06400 -3.0 -2.6 4Fe-4S binding protein compare
MMP_RS06270 -2.9 -5.9 TIGR00300 family protein compare
MMP_RS01830 -2.9 -3.1 tRNA-Val compare
MMP_RS02240 -2.9 -5.5 methanogenesis marker 7 protein compare
MMP_RS03700 -2.9 -13.0 sodium:proton antiporter compare
MMP_RS07545 -2.8 -2.1 HTH domain-containing protein compare
MMP_RS05425 -2.8 -7.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03025 -2.8 -7.3 molybdenum cofactor guanylyltransferase compare
MMP_RS08720 -2.8 -3.2 4Fe-4S binding protein compare
MMP_RS07730 -2.8 -2.8 pyruvate synthase subunit beta compare
MMP_RS05265 -2.8 -4.2 2-isopropylmalate synthase compare
MMP_RS07630 -2.8 -3.2 ATP-binding cassette domain-containing protein compare
MMP_RS02145 -2.7 -11.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS08745 -2.7 -8.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01265 -2.7 -3.2 hypothetical protein compare
MMP_RS04500 -2.7 -17.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS04775 -2.6 -5.4 adenosylhomocysteinase compare
MMP_RS01755 -2.6 -2.4 DUF2097 domain-containing protein compare
MMP_RS08715 -2.6 -2.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01380 -2.5 -8.0 PHP domain-containing protein compare
MMP_RS07955 -2.5 -7.7 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07600 -2.5 -5.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04790 -2.5 -15.6 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS01220 -2.5 -11.0 hypothetical protein compare
MMP_RS02135 -2.5 -6.3 DUF5612 domain-containing protein compare
MMP_RS01795 -2.5 -2.7 methanogenesis marker 6 protein compare
MMP_RS02900 -2.5 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01385 -2.5 -1.2 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06475 -2.4 -6.0 FAD-dependent oxidoreductase compare
MMP_RS08650 -2.4 -4.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06630 -2.3 -1.6 UPF0058 family protein compare
MMP_RS06925 -2.3 -4.0 ribonuclease VapC4 compare
MMP_RS03445 -2.3 -1.7 methanogenesis marker 17 protein compare
MMP_RS00305 -2.3 -3.0 phosphoribosyl-ATP diphosphatase compare
MMP_RS01225 -2.2 -7.1 DUF5379 domain-containing protein compare
MMP_RS05925 -2.2 -6.2 small nuclear ribonucleoprotein compare
MMP_RS08330 -2.2 -6.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS06285 -2.2 -3.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02195 -2.2 -5.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS05845 -2.2 -2.4 tRNA-intron lyase compare
MMP_RS01500 -2.2 -3.2 CBS domain-containing protein compare
MMP_RS08635 -2.2 -3.0 UbiA family prenyltransferase compare
MMP_RS04780 -2.1 -5.1 ribonuclease P compare
MMP_RS00695 -2.1 -1.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06895 -2.1 -2.6 selenocysteine-specific translation elongation factor compare
MMP_RS06020 -2.1 -5.7 archaeoflavoprotein AfpA compare
MMP_RS07605 -2.0 -3.7 diadenylate cyclase compare
MMP_RS03580 -2.0 -6.5 signal recognition particle-docking protein FtsY compare
MMP_RS04685 -2.0 -3.0 DUF126 domain-containing protein compare
MMP_RS06625 -2.0 -3.2 DNA primase compare
MMP_RS08095 -2.0 -6.4 dethiobiotin synthase compare
MMP_RS04710 -2.0 -2.5 hypothetical protein compare
MMP_RS05815 -2.0 -2.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02280 -2.0 -1.5 DUF211 domain-containing protein compare
MMP_RS07390 -2.0 -4.2 cell division protein FtsZ compare
MMP_RS01700 -2.0 -1.6 dihydroxy-acid dehydratase compare
MMP_RS06295 -2.0 -8.0 methanogenesis marker 14 protein compare
MMP_RS01800 -1.9 -4.4 TIGR00303 family protein compare
MMP_RS01610 -1.9 -5.3 hypothetical protein compare
MMP_RS00900 -1.9 -2.6 50S ribosomal protein L39e compare
MMP_RS07755 -1.9 -2.1 DUF555 domain-containing protein compare
MMP_RS08435 -1.9 -2.9 Era-like GTP-binding protein compare
MMP_RS07380 -1.9 -3.3 transcription elongation factor Spt5 compare
MMP_RS01020 -1.8 -1.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01725 -1.8 -6.0 class I SAM-dependent methyltransferase family protein compare
MMP_RS03475 -1.8 -1.0 hypothetical protein compare
MMP_RS02345 -1.8 -4.0 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08210 -1.8 -3.1 phosphatidylglycerophosphatase A compare
MMP_RS09020 -1.8 -2.6 hypothetical protein compare
MMP_RS08320 -1.8 -6.1 molybdopterin molybdotransferase MoeA compare
MMP_RS08100 -1.7 -7.3 8-amino-7-oxononanoate synthase compare
MMP_RS08790 -1.7 -3.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS08105 -1.7 -7.1 6-carboxyhexanoate--CoA ligase compare
MMP_RS03960 -1.7 -1.6 hypothetical protein compare
MMP_RS07420 -1.7 -5.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00685 -1.7 -4.4 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07750 -1.7 -5.4 DUF357 domain-containing protein compare
MMP_RS00130 -1.6 -1.9 nickel-responsive transcriptional regulator NikR compare
MMP_RS07355 -1.6 -1.5 transcription factor S compare
MMP_RS03250 -1.6 -3.7 MJ1244 family protein compare
MMP_RS06885 -1.6 -2.3 50S ribosome-binding GTPase compare
MMP_RS07365 -1.6 -9.4 2-phosphoglycerate kinase compare
MMP_RS05285 -1.6 -7.3 MMPL family transporter compare
MMP_RS05280 -1.6 -8.9 COG1361 S-layer family protein compare
MMP_RS06230 -1.5 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS05345 -1.5 -7.1 hypothetical protein compare
MMP_RS08460 -1.5 -3.4 proteasome-activating nucleotidase compare
MMP_RS06340 -1.5 -6.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02355 -1.5 -4.4 30S ribosomal protein S27ae compare
MMP_RS04585 -1.5 -8.3 AIR synthase related protein compare
MMP_RS03140 -1.5 -8.9 hypothetical protein compare
MMP_RS02800 -1.4 -6.8 nucleotidyltransferase domain-containing protein compare
MMP_RS01325 -1.4 -2.4 dihydroneopterin aldolase family protein compare
MMP_RS02885 -1.4 -9.0 molybdopterin biosynthesis protein compare
MMP_RS03640 -1.4 -4.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07710 -1.4 -7.0 cell division protein FtsZ compare
MMP_RS06120 -1.4 -2.0 UPF0147 family protein compare
MMP_RS00895 -1.4 -4.8 hypothetical protein compare
MMP_RS07645 -1.4 -6.4 aldehyde dehydrogenase family protein compare
MMP_RS05540 -1.4 -2.6 hypothetical protein compare
MMP_RS07200 -1.4 -5.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07860 -1.4 -1.2 hypothetical protein compare
MMP_RS03145 -1.4 -6.8 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS08195 -1.4 -7.2 hypothetical protein compare
MMP_RS06725 -1.3 -6.9 hypothetical protein compare
MMP_RS06840 -1.3 -1.2 DNA-directed RNA polymerase subunit N compare
MMP_RS01955 -1.3 -3.2 hypothetical protein compare
MMP_RS04720 -1.3 -2.7 DedA family protein compare
MMP_RS00810 -1.3 -5.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04090 -1.3 -2.7 hypothetical protein compare
MMP_RS02930 -1.3 -3.5 class I SAM-dependent methyltransferase compare
MMP_RS03400 -1.3 -2.6 archease compare
MMP_RS07540 -1.2 -4.2 CBS domain-containing protein compare
MMP_RS01720 -1.2 -1.4 replication factor C large subunit compare
MMP_RS07090 -1.2 -5.6 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01665 -1.2 -3.4 DUF2111 domain-containing protein compare
MMP_RS07705 -1.2 -6.7 transcriptional regulator compare
MMP_RS01885 -1.2 -6.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06105 -1.2 -7.2 hydrogenase maturation peptidase HycI compare
MMP_RS05430 -1.2 -4.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS05245 -1.2 -6.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06865 -1.2 -1.1 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS00985 -1.2 -4.0 CDC48 family AAA ATPase compare
MMP_RS03095 -1.2 -6.7 diphthine synthase compare
MMP_RS01880 -1.2 -4.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01840 -1.2 -6.0 TIGR00289 family protein compare
MMP_RS04785 -1.1 -7.2 hypothetical protein compare
MMP_RS04955 -1.1 -4.2 DNA topoisomerase I compare
MMP_RS04875 -1.1 -4.9 energy-converting hydrogenase B subunit P compare
MMP_RS08760 -1.1 -1.1 hypothetical protein compare
MMP_RS00110 -1.1 -2.7 hypothetical protein compare
MMP_RS03520 -1.1 -1.2 YwbE family protein compare
MMP_RS08820 -1.1 -3.2 hypothetical protein compare
MMP_RS03485 -1.1 -3.2 TIGR00267 family protein compare
MMP_RS04485 -1.1 -7.8 putative beta-lysine N-acetyltransferase compare
MMP_RS02875 -1.1 -5.6 chorismate pyruvate-lyase family protein compare
MMP_RS03440 -1.1 -1.4 MoaD/ThiS family protein compare
MMP_RS07195 -1.1 -5.8 M20 family metallo-hydrolase compare
MMP_RS07575 -1.1 -2.6 RNA ligase partner protein compare
MMP_RS05460 -1.0 -6.3 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS08440 -1.0 -2.1 cell division protein SepF compare
MMP_RS04900 -1.0 -8.6 hypothetical protein compare
MMP_RS01975 -1.0 -7.9 hypothetical protein compare
MMP_RS06395 -1.0 -3.7 ThiF family adenylyltransferase compare
MMP_RS01335 -1.0 -2.3 prefoldin subunit beta compare
MMP_RS01875 -1.0 -5.5 N-acetyltransferase compare
MMP_RS07075 -1.0 -2.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS06940 -1.0 -2.6 polyprenyl diphosphate synthase compare
MMP_RS05250 -1.0 -1.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00320 -1.0 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS01905 -1.0 -6.3 glycosyltransferase compare
MMP_RS06215 -1.0 -2.6 30S ribosomal protein S6e compare
MMP_RS00720 -1.0 -4.6 metal-dependent hydrolase compare
MMP_RS00730 -1.0 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06130 -1.0 -1.9 peptidylprolyl isomerase compare
MMP_RS00520 -1.0 -1.3 RNA polymerase Rpb4 family protein compare
MMP_RS00915 -1.0 -4.0 DUF116 domain-containing protein compare
MMP_RS05440 -1.0 -7.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS07580 -1.0 -2.3 DUF356 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Ammonium chloride across organisms