Experiment set6IT075 for Klebsiella michiganensis M5al

Compare to:

Sodium nitrate nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -9.0 -3.6 histidinol-phosphate transaminase compare
BWI76_RS00805 -8.7 -4.0 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS20350 -8.7 -4.8 amidophosphoribosyltransferase compare
BWI76_RS20355 -8.6 -3.4 colicin V production protein compare
BWI76_RS09760 -8.1 -4.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS18950 -8.0 -3.6 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS16235 -8.0 -3.2 membrane protein compare
BWI76_RS11965 -7.9 -3.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04670 -7.8 -5.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS02995 -7.8 -7.4 aspartate carbamoyltransferase compare
BWI76_RS18935 -7.6 -5.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS01610 -7.5 -8.4 phosphoribosylamine--glycine ligase compare
BWI76_RS11855 -7.5 -6.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04465 -7.5 -4.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00990 -7.4 -5.9 ketol-acid reductoisomerase compare
BWI76_RS23365 -7.4 -3.0 LysR family transcriptional regulator compare
BWI76_RS25115 -7.4 -6.0 argininosuccinate synthase compare
BWI76_RS09755 -7.4 -4.4 phosphoserine transaminase compare
BWI76_RS22805 -7.3 -8.7 GTP diphosphokinase compare
BWI76_RS00850 -7.3 -7.3 acetylglutamate kinase compare
BWI76_RS21475 -7.3 -5.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04665 -7.2 -12.9 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00855 -7.1 -7.0 argininosuccinate lyase compare
BWI76_RS20895 -7.0 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00980 -7.0 -9.6 PLP-dependent threonine dehydratase compare
BWI76_RS05835 -7.0 -3.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS00385 -7.0 -9.5 nitrogen assimilation regulatory protein compare
BWI76_RS18920 -6.9 -3.2 ATP phosphoribosyltransferase compare
BWI76_RS18925 -6.7 -4.7 histidinol dehydrogenase compare
BWI76_RS00835 -6.7 -13.7 phosphoenolpyruvate carboxylase compare
BWI76_RS05840 -6.6 -3.9 glutamate 5-kinase compare
BWI76_RS04470 -6.6 -10.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS00785 -6.5 -6.3 cystathionine gamma-synthase compare
BWI76_RS27385 -6.4 -7.1 orotate phosphoribosyltransferase compare
BWI76_RS07070 -6.2 -4.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS08385 -6.1 -2.3 citrate (Si)-synthase compare
BWI76_RS26055 -6.1 -8.5 siroheme synthase compare
BWI76_RS23360 -5.9 -2.7 diaminopimelate decarboxylase compare
BWI76_RS25320 -5.8 -7.4 glutamate synthase compare
BWI76_RS26085 -5.8 -2.3 3-dehydroquinate synthase compare
BWI76_RS05015 -5.7 -2.6 transcriptional regulator compare
BWI76_RS24285 -5.7 -5.6 cystathionine beta-lyase compare
BWI76_RS06525 -5.7 -5.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS18940 -5.6 -3.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04255 -5.5 -8.0 threonine synthase compare
BWI76_RS00975 -5.5 -10.1 dihydroxy-acid dehydratase compare
BWI76_RS11610 -5.4 -2.5 glutamate dehydrogenase compare
BWI76_RS01615 -5.4 -8.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS11860 -5.3 -7.2 anthranilate synthase component I compare
BWI76_RS04245 -5.3 -11.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS22690 -5.3 -2.6 adenylyl-sulfate kinase compare
BWI76_RS11850 -5.2 -8.1 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00965 -5.2 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS02530 -5.1 -2.6 tRNA dimethylallyltransferase compare
BWI76_RS27425 -5.1 -2.0 DNA-directed RNA polymerase subunit omega compare
BWI76_RS21565 -5.1 -1.2 outer membrane protein assembly factor BamE compare
BWI76_RS04305 -5.1 -1.2 molecular chaperone DnaJ compare
BWI76_RS09910 -5.0 -13.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21580 -5.0 -2.0 SsrA-binding protein compare
BWI76_RS17380 -5.0 -3.4 nitrate transporter component conserved
BWI76_RS25315 -5.0 -9.6 glutamate synthase large subunit compare
BWI76_RS23220 -5.0 -6.2 amino-acid N-acetyltransferase compare
BWI76_RS11840 -4.9 -2.6 tryptophan synthase subunit alpha compare
BWI76_RS09645 -4.9 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS25285 -4.9 -1.1 HPr family phosphocarrier protein compare
BWI76_RS00400 -4.9 -1.9 glutamine synthetase compare
BWI76_RS15435 -4.9 -1.1 hypothetical protein compare
BWI76_RS23920 -4.8 -5.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21265 -4.8 -9.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS13560 -4.8 -1.1 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS09615 -4.8 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS25645 -4.7 -6.7 shikimate dehydrogenase compare
BWI76_RS00845 -4.6 -7.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11845 -4.6 -1.3 tryptophan synthase subunit beta compare
BWI76_RS23240 -4.6 -3.2 exonuclease V subunit gamma compare
BWI76_RS06680 -4.5 -1.0 hypothetical protein compare
BWI76_RS00390 -4.5 -5.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS04240 -4.5 -1.3 thr operon leader peptide compare
BWI76_RS23070 -4.5 -4.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS04685 -4.4 -7.8 putative leucine operon leader peptide compare
BWI76_RS22760 -4.4 -7.1 sulfite reductase subunit beta compare
BWI76_RS18580 -4.4 -1.4 hypothetical protein compare
BWI76_RS06340 -4.4 -1.0 hypothetical protein compare
BWI76_RS01655 -4.4 -5.8 homoserine O-succinyltransferase compare
BWI76_RS19690 -4.3 -1.2 LysR family transcriptional regulator compare
BWI76_RS16955 -4.2 -1.0 hypothetical protein compare
BWI76_RS22755 -4.2 -3.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00025 -4.2 -1.0 hypothetical protein compare
BWI76_RS00140 -4.2 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS08765 -4.2 -2.6 8-amino-7-oxononanoate synthase compare
BWI76_RS07065 -4.2 -4.0 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22765 -4.1 -8.2 sulfite reductase subunit alpha compare
BWI76_RS20640 -4.1 -4.7 cysteine synthase A compare
BWI76_RS05200 -4.1 -2.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS00720 -4.1 -3.1 DNA-binding response regulator compare
BWI76_RS08925 -3.9 -3.3 DNA-binding protein YbiB conserved
BWI76_RS03010 -3.8 -5.2 ornithine carbamoyltransferase compare
BWI76_RS04645 -3.8 -3.8 3-dehydroquinase compare
BWI76_RS12885 -3.7 -2.4 hypothetical protein compare
BWI76_RS26890 -3.7 -1.2 hypothetical protein compare
BWI76_RS09660 -3.7 -1.9 DNA translocase FtsK compare
BWI76_RS16895 -3.6 -1.1 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS20720 -3.6 -1.2 hypothetical protein compare
BWI76_RS08395 -3.6 -1.6 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS07725 -3.6 -1.2 iron-enterobactin transporter permease compare
BWI76_RS21465 -3.6 -2.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS13755 -3.5 -1.1 hypothetical protein compare
BWI76_RS17375 -3.5 -1.5 nitrate ABC transporter, permease protein compare
BWI76_RS16120 -3.5 -3.1 4-carboxymuconolactone decarboxylase compare
BWI76_RS04160 -3.5 -4.2 phosphoserine phosphatase compare
BWI76_RS17365 -3.4 -7.6 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) conserved
BWI76_RS25920 -3.4 -1.8 peptidylprolyl isomerase compare
BWI76_RS27430 -3.3 -1.1 (p)ppGpp synthetase compare
BWI76_RS04250 -3.3 -4.6 homoserine kinase compare
BWI76_RS04680 -3.2 -6.4 2-isopropylmalate synthase compare
BWI76_RS17385 -3.2 -5.3 nitrate regulatory protein conserved
BWI76_RS14450 -3.2 -2.9 hypothetical protein compare
BWI76_RS14390 -3.2 -1.5 hypothetical protein compare
BWI76_RS15565 -3.2 -3.5 hypothetical protein compare
BWI76_RS24600 -3.1 -2.9 dihydroxyacetone kinase compare
BWI76_RS08720 -3.1 -1.8 imidazolonepropionase compare
BWI76_RS08180 -3.0 -5.7 asparagine synthase B compare
BWI76_RS11440 -3.0 -1.0 hypothetical protein compare
BWI76_RS01275 -3.0 -6.4 LysR family transcriptional regulator compare
BWI76_RS18955 -3.0 -2.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS25335 -2.9 -1.6 stringent starvation protein A compare
BWI76_RS11770 -2.9 -2.2 hypothetical protein compare
BWI76_RS11900 -2.9 -1.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS20380 -2.9 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS27875 -2.9 -0.9 membrane protein compare
BWI76_RS17300 -2.8 -0.9 tRNA-Tyr compare
BWI76_RS20435 -2.8 -0.9 chorismate synthase compare
BWI76_RS20965 -2.8 -1.7 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS16195 -2.8 -1.2 hypothetical protein compare
BWI76_RS01385 -2.7 -2.3 potassium transporter compare
BWI76_RS04715 -2.7 -1.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS25280 -2.7 -1.5 RNase adaptor protein RapZ compare
BWI76_RS02735 -2.7 -4.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS17370 -2.7 -1.1 nitrate transporter NasD compare
BWI76_RS22300 -2.7 -1.7 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS06535 -2.6 -4.5 endopeptidase La compare
BWI76_RS07785 -2.6 -1.4 transcriptional regulator compare
BWI76_RS08275 -2.6 -1.1 LexA regulated protein compare
BWI76_RS14075 -2.6 -1.1 TetR family transcriptional regulator compare
BWI76_RS04605 -2.5 -1.1 thiamine ABC transporter ATP-binding protein compare
BWI76_RS13590 -2.5 -2.1 hypothetical protein compare
BWI76_RS24580 -2.5 -3.5 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS08525 -2.5 -2.9 colicin transporter compare
BWI76_RS10665 -2.5 -1.7 PTS system fructose-like transporter subunit EIIB compare
BWI76_RS09655 -2.5 -3.0 leucine-responsive regulatory protein compare
BWI76_RS01800 -2.4 -2.1 glucose-6-phosphate isomerase compare
BWI76_RS23230 -2.4 -4.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS11980 -2.4 -1.0 DeoR family transcriptional regulator compare
BWI76_RS13245 -2.4 -1.8 DNA-damage-inducible protein I compare
BWI76_RS12090 -2.3 -2.4 HNH endonuclease compare
BWI76_RS23055 -2.3 -1.4 cobalamin biosynthesis protein CbiG compare
BWI76_RS17570 -2.3 -1.9 iron-sulfur-binding protein compare
BWI76_RS15195 -2.2 -1.2 DUF4186 domain-containing protein compare
BWI76_RS18770 -2.2 -0.9 DNA gyrase inhibitor compare
BWI76_RS01200 -2.2 -1.7 diaminopimelate epimerase compare
BWI76_RS10835 -2.2 -1.1 hypothetical protein compare
BWI76_RS04270 -2.2 -3.1 transaldolase compare
BWI76_RS23915 -2.1 -1.7 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS10530 -2.1 -1.5 GntR family transcriptional regulator with compare
BWI76_RS20650 -2.1 -2.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS06120 -2.1 -1.6 membrane protein compare
BWI76_RS22645 -2.1 -3.3 RNA polymerase sigma factor RpoS compare
BWI76_RS15835 -2.0 -1.6 hypothetical protein compare
BWI76_RS24595 -2.0 -3.3 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS12870 -2.0 -1.6 putative phytanoyl-CoA dioxygenase compare
BWI76_RS06605 -2.0 -4.6 ammonium transporter conserved
BWI76_RS09610 -2.0 -2.2 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS12485 -2.0 -2.0 TyrR family transcriptional regulator compare
BWI76_RS21690 -2.0 -1.5 hypothetical protein compare
BWI76_RS27390 -1.9 -2.2 ribonuclease PH compare
BWI76_RS03665 -1.9 -1.3 ABC transporter ATP-binding protein compare
BWI76_RS20440 -1.9 -2.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS01210 -1.9 -1.9 tyrosine recombinase XerC compare
BWI76_RS17075 -1.9 -3.9 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS26095 -1.9 -0.9 shikimate kinase compare
BWI76_RS08640 -1.9 -1.3 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS21380 -1.8 -2.5 uracil-DNA glycosylase compare
BWI76_RS14415 -1.8 -1.3 transcriptional regulator, TetR family protein compare
BWI76_RS00985 -1.8 -3.0 transcriptional regulator IlvY compare
BWI76_RS12195 -1.8 -1.4 hypothetical protein compare
BWI76_RS15810 -1.8 -4.8 hypothetical protein compare
BWI76_RS11105 -1.8 -1.7 aminodeoxychorismate lyase compare
BWI76_RS13600 -1.7 -0.8 hypothetical protein compare
BWI76_RS12495 -1.7 -1.2 2-Cys peroxiredoxin compare
BWI76_RS00960 -1.7 -2.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS27225 -1.7 -2.2 rhodanese-like domain-containing protein compare
BWI76_RS06490 -1.7 -3.3 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS04675 -1.7 -1.9 3-isopropylmalate dehydrogenase compare
BWI76_RS11580 -1.7 -1.4 L-asparaginase 1 compare
BWI76_RS13435 -1.7 -1.0 hypothetical protein compare
BWI76_RS08755 -1.6 -2.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
BWI76_RS13585 -1.6 -2.0 4-oxalocrotonate tautomerase compare
BWI76_RS18855 -1.6 -1.8 cysteine desulfurase NifS compare
BWI76_RS21450 -1.6 -1.1 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09465 -1.6 -3.1 polyamine ABC transporter ATP-binding protein compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source Sodium nitrate in Klebsiella michiganensis M5al

For nitrogen source Sodium nitrate across organisms