Experiment set6IT072 for Pseudomonas fluorescens FW300-N2E3

Compare to:

4C survival; 672 hrs

Genes with specific phenotypes:

  gene name fitness t score description  
AO353_18785 -2.6 -6.6 flagellar biosynthesis sigma factor compare
AO353_24040 -2.4 -7.3 iron ABC transporter permease compare
AO353_23325 -2.4 -5.5 hypothetical protein compare
AO353_18660 -2.4 -6.6 AAA family ATPase compare
AO353_18730 -2.3 -5.9 flagellar motor switch protein FliM compare
AO353_11170 -2.1 -9.1 hypothetical protein compare
AO353_18680 -2.1 -5.1 flagellar M-ring protein FliF compare
AO353_05840 -2.0 -10.0 dolichyl-phosphate-mannose-protein mannosyltransferase compare
AO353_10070 -2.0 -7.7 cell wall assembly protein compare
AO353_18650 -2.0 -6.3 flagellar export chaperone FliS compare
AO353_02845 -2.0 -11.2 flagellar biosynthesis protein FlgE compare
AO353_08080 -2.0 -5.9 chemotaxis protein compare
AO353_02480 -1.9 -6.5 peptidylprolyl isomerase compare
AO353_16365 -1.9 -11.9 multidrug transporter AcrB compare
AO353_18625 -1.8 -8.8 flagellar biosynthesis protein FlgL compare
AO353_18675 -1.8 -5.1 flagellar hook-basal body protein FliE compare
AO353_18615 -1.8 -7.6 flagellar biosynthesis protein FlgJ compare
AO353_24030 -1.8 -7.6 ABC transporter ATP-binding protein compare
AO353_24035 -1.8 -7.1 iron ABC transporter permease compare
AO353_17025 -1.7 -9.8 beta-agarase compare
AO353_13005 -1.7 -8.9 channel protein TolC compare
AO353_18685 -1.7 -6.4 flagellar motor switch protein FliG compare
AO353_08540 -1.7 -7.1 alpha/beta hydrolase compare
AO353_18750 -1.7 -5.6 flagellar biosynthetic protein FliQ compare
AO353_24025 -1.7 -6.4 ABC transporter ATP-binding protein compare
AO353_05440 -1.6 -6.4 glycine/betaine ABC transporter ATP-binding protein compare
AO353_18755 -1.6 -5.1 flagellar biosynthetic protein FliR compare
AO353_27895 -1.6 -5.0 isochorismatase compare
AO353_18635 -1.6 -7.7 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
AO353_18760 -1.6 -5.8 flagellar biosynthetic protein FlhB compare
AO353_05430 -1.5 -7.7 glycine/betaine ABC transporter substrate-binding protein compare
AO353_18695 -1.5 -6.3 flagellar protein export ATPase FliI compare
AO353_07780 -1.5 -7.4 Carnitine ABC transporter, substrate-binding component CaiX (from data) compare
AO353_18720 -1.5 -6.8 flagellar hook-length control protein compare
AO353_18825 -1.5 -6.6 chemotaxis protein CheW compare
AO353_12095 -1.5 -5.8 amino acid ABC transporter substrate-binding protein compare
AO353_18620 -1.5 -10.2 flagellar biosynthesis protein FlgK compare
AO353_16415 -1.4 -7.4 beta-(1-3)-glucosyl transferase compare
AO353_05435 -1.4 -5.3 choline ABC transporter permease compare
AO353_02875 -1.4 -5.6 flagellar biosynthesis protein FlgA compare
AO353_01305 -1.4 -5.6 hypothetical protein compare
AO353_08085 -1.4 -8.2 histidine kinase compare
AO353_18645 -1.4 -8.0 flagellar cap protein FliD compare
AO353_18815 -1.4 -5.1 flagellar motor protein MotD compare
AO353_10825 -1.4 -8.4 hypothetical protein compare
AO353_24050 -1.4 -5.8 ferric anguibactin-binding protein compare
AO353_23915 -1.3 -7.4 chemotaxis protein CheY compare
AO353_02865 -1.3 -5.9 chemotaxis protein compare
AO353_27915 -1.3 -5.0 arginine N-succinyltransferase compare
AO353_24055 -1.2 -7.2 ligand-gated channel protein compare
AO353_13090 -1.1 -5.1 flagellar motor stator protein MotA compare
AO353_21470 +1.0 8.5 cation:proton antiporter compare
AO353_16325 +1.0 6.1 hypothetical protein compare
AO353_06345 +1.1 10.1 histidine kinase compare
AO353_21460 +1.1 7.6 cation:proton antiporter compare
AO353_27885 +1.1 5.8 precorrin 6A synthase compare
AO353_12850 +1.3 11.5 diguanylate cyclase compare
AO353_04460 +1.3 7.6 N-acetylglucosamine-specific PTS system, I, HPr, and IIA components (nagF) (from data) compare
AO353_04465 +1.4 10.8 N-acetylglucosamine-specific PTS system, IIBC components (nagE) (from data) compare
AO353_23925 +1.4 5.2 histidine kinase compare
AO353_00895 +1.5 9.0 2-methylcitrate synthase compare
AO353_19040 +1.6 8.4 thioredoxin compare
AO353_12845 +1.6 10.7 peptide methionine sulfoxide reductase compare
AO353_01075 +1.7 8.8 hypothetical protein compare
AO353_14025 +1.7 14.8 diguanylate phosphodiesterase compare
AO353_23980 +1.8 7.7 sugar ABC transporter substrate-binding protein compare
AO353_09025 +1.8 6.9 nucleoside diphosphate kinase regulator compare
AO353_23975 +2.0 16.7 diguanylate cyclase compare
AO353_08025 +2.1 13.8 amino acid ABC transporter substrate-binding protein compare
AO353_07885 +2.1 5.8 diguanylate cyclase compare
AO353_27930 +2.1 8.5 LysR family transcriptional regulator compare
AO353_02120 +2.2 19.0 hypothetical protein compare
AO353_16185 +2.2 19.3 diguanylate cyclase compare
AO353_03115 +2.2 5.0 TetR family transcriptional regulator compare
AO353_20380 +2.2 16.8 acyl-CoA dehydrogenase compare
AO353_16170 +2.4 19.8 histidine kinase compare
AO353_02470 +2.4 8.6 Cro/Cl family transcriptional regulator compare
AO353_00500 +2.5 9.7 TonB box-like protein compare
AO353_16180 +2.5 19.8 diguanylate cyclase compare
AO353_27940 +2.6 14.3 succinyl-CoA--3-ketoacid-CoA transferase compare
AO353_02580 +2.7 24.3 Long-chain fatty acid transport protein compare
AO353_05780 +2.7 21.3 AMP-dependent synthetase compare
AO353_00700 +3.4 13.6 Cro/Cl family transcriptional regulator compare
AO353_27935 +3.5 11.5 succinyl-CoA--3-ketoacid-CoA transferase compare
AO353_25685 +4.3 28.0 acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) (from data) compare