Experiment set6IT070 for Pseudomonas fluorescens FW300-N2E3
4C survival; 192 hrs
Group: survivalMedia: LB
Culturing: pseudo3_N2E3_ML2, tube, Aerobic, at 30 (C), shaken=200 rpm
Growth: about 7.9 generations
By: Jayashree on 10/28/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 22 genes in this experiment
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Oxidative phosphorylation
- Ascorbate and aldarate metabolism
- Ubiquinone and menaquinone biosynthesis
- Photosynthesis
- Nucleotide sugars metabolism
- Glycosaminoglycan degradation
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| arsenite to oxygen electron transfer | 2 | 1 | 1 |
| aerobic respiration III (alternative oxidase pathway) | 3 | 3 | 1 |
| arsenite to oxygen electron transfer (via azurin) | 3 | 1 | 1 |
| aerobic respiration I (cytochrome c) | 4 | 3 | 1 |
| aerobic respiration II (cytochrome c) (yeast) | 4 | 3 | 1 |
| Fe(II) oxidation | 6 | 3 | 1 |