Experiment set6IT065 for Klebsiella michiganensis M5al

Compare to:

Parabanic Acid nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS21075 +1.3 2.4 membrane protein compare
BWI76_RS21245 +1.2 4.2 nitrogen regulatory protein P-II compare
BWI76_RS23140 +1.1 1.8 carboxysome shell protein compare
BWI76_RS15185 +1.1 1.7 N-acetyltransferase compare
BWI76_RS15970 +1.1 4.1 carboxypeptidase M32 compare
BWI76_RS21810 +1.1 1.6 universal stress protein compare
BWI76_RS09560 +1.1 1.5 DoxX family membrane protein compare
BWI76_RS11300 +1.0 1.8 cupin compare
BWI76_RS03045 +1.0 1.7 hypothetical protein compare
BWI76_RS16470 +1.0 2.0 transcriptional repressor NemR compare
BWI76_RS13630 +0.9 3.1 ABC transporter compare
BWI76_RS10875 +0.9 3.8 quercetin 2,3-dioxygenase compare
BWI76_RS23195 +0.9 2.8 ethanolamine utilization protein EutP compare
BWI76_RS15260 +0.9 1.8 hypothetical protein compare
BWI76_RS21675 +0.9 1.5 hypothetical protein compare
BWI76_RS16150 +0.9 2.1 IclR family transcriptional regulator compare
BWI76_RS25000 +0.9 1.3 malonate decarboxylase acyl carrier protein compare
BWI76_RS06340 +0.9 1.1 hypothetical protein compare
BWI76_RS19850 +0.8 1.3 tRNA-Pro compare
BWI76_RS11635 +0.8 1.7 ABC transporter compare
BWI76_RS17920 +0.8 1.3 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS17570 +0.8 1.5 iron-sulfur-binding protein compare
BWI76_RS15190 +0.8 2.3 GGDEF domain-containing protein compare
BWI76_RS24740 +0.8 2.9 GntR family transcriptional regulator compare
BWI76_RS10635 +0.8 1.8 GGDEF domain-containing protein compare
BWI76_RS21570 +0.8 2.4 RnfH family protein compare
BWI76_RS15015 +0.8 1.5 DUF2132 domain-containing protein compare
BWI76_RS11170 +0.8 1.3 hypothetical protein compare
BWI76_RS20720 +0.8 1.6 hypothetical protein compare
BWI76_RS15195 +0.8 1.8 DUF4186 domain-containing protein compare
BWI76_RS14065 +0.8 1.5 hypothetical protein compare
BWI76_RS25375 +0.8 0.7 hypothetical protein compare
BWI76_RS15940 +0.8 1.9 DMSO reductase maturation protein DsmD compare
BWI76_RS04175 +0.7 2.4 energy-dependent translational throttle protein EttA compare
BWI76_RS14870 +0.7 1.8 hypothetical protein compare
BWI76_RS11780 +0.7 1.3 2-deoxyglucose-6-phosphatase compare
BWI76_RS27610 +0.7 2.0 hydroxyacid dehydrogenase compare
BWI76_RS23735 +0.7 2.4 sugar diacid utilization regulator compare
BWI76_RS00640 +0.7 2.1 L-rhamnose mutarotase compare
BWI76_RS17045 +0.7 1.5 hypothetical protein compare
BWI76_RS17400 +0.7 1.1 transporter compare
BWI76_RS08825 +0.7 1.8 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS09290 +0.7 1.0 phage Tail Protein X compare
BWI76_RS16260 +0.7 1.6 two-component sensor histidine kinase compare
BWI76_RS01540 +0.7 1.6 thiamine biosynthesis protein ThiS compare
BWI76_RS12780 +0.7 1.5 hypothetical protein compare
BWI76_RS22210 +0.7 2.3 murein transglycosylase B compare
BWI76_RS16175 +0.7 3.6 p-aminobenzoyl-glutamate transporter compare
BWI76_RS19935 +0.7 1.4 hypothetical protein compare
BWI76_RS11895 +0.7 1.7 AraC family transcriptional regulator compare
BWI76_RS15360 +0.7 1.2 hypothetical protein compare
BWI76_RS02225 +0.7 1.1 phosphonate C-P lyase system protein PhnG compare
BWI76_RS07785 +0.7 1.3 transcriptional regulator compare
BWI76_RS07740 +0.7 1.2 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS00710 +0.6 1.3 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS09625 +0.6 1.1 hypothetical protein compare
BWI76_RS12045 +0.6 1.6 hypothetical protein compare
BWI76_RS25635 +0.6 1.5 gamma carbonic anhydrase family protein compare
BWI76_RS26005 +0.6 1.6 glutamine amidotransferase compare
BWI76_RS16630 +0.6 2.1 MBL fold metallo-hydrolase compare
BWI76_RS06680 +0.6 0.9 hypothetical protein compare
BWI76_RS17330 +0.6 1.9 nitrate reductase subunit beta compare
BWI76_RS11285 +0.6 1.4 transcriptional regulator compare
BWI76_RS18455 +0.6 1.0 tRNA-Ser compare
BWI76_RS16980 +0.6 2.4 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS22450 +0.6 1.2 selenoprotein W-related protein compare
BWI76_RS15205 +0.6 1.7 succinate-semialdehyde dehydrogenase compare
BWI76_RS14525 +0.6 2.3 AraC family transcriptional regulator compare
BWI76_RS10400 +0.6 1.4 hypothetical protein compare
BWI76_RS15365 +0.6 2.3 hypothetical protein compare
BWI76_RS01325 +0.6 1.6 twin-arginine translocase subunit TatB compare
BWI76_RS02680 +0.6 1.3 EamA family transporter compare
BWI76_RS26095 +0.6 1.0 shikimate kinase compare
BWI76_RS05070 +0.6 1.2 type II secretion system protein GspH compare
BWI76_RS10755 +0.6 1.0 pyrimidine utilization flavin reductase protein F compare
BWI76_RS06545 +0.6 1.8 peptidylprolyl isomerase compare
BWI76_RS12865 +0.6 2.3 acetylornithine deacetylase compare
BWI76_RS09165 +0.6 1.9 phosphatase YbjI compare
BWI76_RS17795 +0.6 1.8 ribonuclease D compare
BWI76_RS15985 +0.6 2.8 LysR family transcriptional regulator compare
BWI76_RS26065 +0.6 1.6 phosphoglycolate phosphatase compare
BWI76_RS13980 +0.6 1.2 hypothetical protein compare
BWI76_RS02580 +0.6 0.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS27900 +0.6 1.9 DNA damage-inducible protein D compare
BWI76_RS20715 +0.6 1.3 RpoE-regulated lipoprotein compare
BWI76_RS10475 +0.6 2.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS26150 +0.6 1.9 molecular chaperone Hsp33 compare
BWI76_RS10730 +0.6 0.7 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS18360 +0.6 0.9 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS15035 +0.6 1.2 metal ABC transporter permease compare
BWI76_RS24825 +0.6 0.7 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS26890 +0.6 0.9 hypothetical protein compare
BWI76_RS13110 +0.6 1.7 phenylacetic acid degradation protein compare
BWI76_RS11440 +0.6 0.8 hypothetical protein compare
BWI76_RS08800 +0.5 2.4 phosphoethanolamine transferase EptA compare
BWI76_RS06735 +0.5 1.2 50S ribosomal protein L31 compare
BWI76_RS15280 +0.5 1.9 sugar transporter compare
BWI76_RS26045 +0.5 1.5 nitrite reductase small subunit compare
BWI76_RS18385 +0.5 0.9 hypothetical protein compare
BWI76_RS06950 +0.5 1.8 ABC transporter ATP-binding protein compare
BWI76_RS14285 +0.5 2.1 IS3 family transposase compare
BWI76_RS16455 +0.5 0.8 superoxide dismutase compare
BWI76_RS04980 +0.5 1.8 hypothetical protein compare
BWI76_RS15660 +0.5 0.6 hypothetical protein compare
BWI76_RS07510 +0.5 1.4 hypothetical protein compare
BWI76_RS18830 +0.5 1.4 protein NifY compare
BWI76_RS11605 +0.5 1.5 DNA topoisomerase III compare
BWI76_RS11775 +0.5 0.9 2-deoxy-D-gluconate 3-dehydrogenase compare
BWI76_RS23050 +0.5 1.5 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS13055 +0.5 1.9 NmrA family protein compare
BWI76_RS20390 +0.5 1.7 erythronate-4-phosphate dehydrogenase compare
BWI76_RS21490 +0.5 3.5 GGDEF domain-containing protein compare
BWI76_RS26660 +0.5 2.2 transcription elongation factor GreB compare
BWI76_RS14805 +0.5 1.7 hypothetical protein compare
BWI76_RS18090 +0.5 1.5 phosphoribosylglycinamide formyltransferase 2 compare
BWI76_RS05810 +0.5 0.7 hypothetical protein compare
BWI76_RS06505 +0.5 1.8 hypothetical protein compare
BWI76_RS05655 +0.5 1.6 hypothetical protein compare
BWI76_RS03925 +0.5 2.7 N-acetyltransferase GCN5 compare
BWI76_RS11180 +0.5 2.4 hypothetical protein compare
BWI76_RS09360 +0.5 1.1 hypothetical protein compare
BWI76_RS14975 +0.5 1.2 glyoxalase-like domain protein compare
BWI76_RS25850 +0.5 2.3 prepilin peptidase compare
BWI76_RS12985 +0.5 1.1 transcriptional regulator compare
BWI76_RS16445 +0.5 2.2 auxiliary transporter membrane fusion protein compare
BWI76_RS13070 +0.5 1.6 hypothetical protein compare
BWI76_RS24655 +0.5 1.8 autoinducer 2 ABC transporter permease LsrC compare
BWI76_RS10820 +0.5 1.7 iron uptake system protein EfeO compare
BWI76_RS25245 +0.5 1.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS17300 +0.5 0.5 tRNA-Tyr compare
BWI76_RS11640 +0.5 2.4 ABC transporter membrane protein compare
BWI76_RS13685 +0.5 1.3 IclR family transcriptional regulator compare
BWI76_RS15960 +0.5 1.4 LysR family transcriptional regulator compare
BWI76_RS11200 +0.5 1.7 transpeptidase compare
BWI76_RS23860 +0.5 1.3 protein disulfide oxidoreductase compare
BWI76_RS16595 +0.5 1.9 hypothetical protein compare
BWI76_RS12185 +0.5 1.5 hypothetical protein compare
BWI76_RS18175 +0.5 1.7 hydrolase compare
BWI76_RS14090 +0.5 1.8 polyketide cyclase compare
BWI76_RS17780 +0.5 2.1 septum formation inhibitor compare
BWI76_RS26835 +0.5 1.9 hypothetical protein compare
BWI76_RS14030 +0.5 1.6 ABC transporter permease compare
BWI76_RS21850 +0.5 1.9 AraC family transcriptional regulator compare
BWI76_RS22375 +0.5 1.6 pectin acetylesterase compare
BWI76_RS27850 +0.5 1.7 DNA-binding transcriptional regulator DsdC compare
BWI76_RS25465 +0.5 1.7 transcriptional regulator compare
BWI76_RS07225 +0.5 2.0 putative oxidoreductase compare
BWI76_RS06540 +0.5 1.6 DNA-binding protein HU-beta compare
BWI76_RS13815 +0.5 2.1 ABC transporter compare
BWI76_RS01785 +0.5 2.1 nucleotidyltransferase compare
BWI76_RS12055 +0.5 1.6 DNA single-strand annealing protein RecT-like protein compare
BWI76_RS22650 +0.5 1.8 lipoprotein NlpD compare
BWI76_RS16740 +0.5 1.9 transcriptional regulator compare
BWI76_RS06945 +0.5 1.2 multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 compare
BWI76_RS17375 +0.5 0.6 nitrate ABC transporter, permease protein compare
BWI76_RS19515 +0.5 2.0 D-lactate dehydrogenase (cytochrome c-553) (EC 1.1.2.5) (from data) compare
BWI76_RS21580 +0.5 0.9 SsrA-binding protein compare
BWI76_RS25440 +0.5 2.4 putative barnase inhibitor compare
BWI76_RS04225 +0.5 2.8 cell envelope integrity protein CreD compare
BWI76_RS09680 +0.5 2.1 dimethyl sulfoxide reductase subunit A compare
BWI76_RS23285 +0.5 1.6 hypothetical protein compare
BWI76_RS14480 +0.5 2.1 hypothetical protein compare
BWI76_RS10640 +0.5 1.5 AraC family transcriptional regulator compare
BWI76_RS22085 +0.5 1.2 L-valine transporter subunit YgaH compare
BWI76_RS26410 +0.5 1.1 membrane protein compare
BWI76_RS06930 +0.5 1.8 iron export ABC transporter permease subunit FetB compare
BWI76_RS05040 +0.4 2.1 type II secretion system protein N compare
BWI76_RS22485 +0.4 1.4 hypothetical protein compare
BWI76_RS17420 +0.4 1.2 hypothetical protein compare
BWI76_RS13240 +0.4 0.7 hypothetical protein compare
BWI76_RS26650 +0.4 2.6 iron transporter compare
BWI76_RS06205 +0.4 2.2 recombination-associated protein RdgC compare
BWI76_RS14605 +0.4 1.8 ABC transporter permease compare
BWI76_RS04440 +0.4 2.2 citrate lyase ACP compare
BWI76_RS16110 +0.4 2.3 L-tartrate/succinate antiporter compare
BWI76_RS03610 +0.4 1.2 hypothetical protein compare
BWI76_RS11645 +0.4 1.9 ABC transporter substrate-binding protein compare
BWI76_RS27180 +0.4 2.3 hypothetical protein compare
BWI76_RS16520 +0.4 1.6 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS22620 +0.4 1.5 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS13645 +0.4 0.9 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS09565 +0.4 2.4 hybrid-cluster NAD(P)-dependent oxidoreductase compare
BWI76_RS05430 +0.4 2.2 UbiE/COQ5 family methyltransferase compare
BWI76_RS23985 +0.4 2.1 erythrose-4-phosphate dehydrogenase compare
BWI76_RS08320 +0.4 2.5 potassium-transporting ATPase subunit KdpA compare
BWI76_RS14845 +0.4 2.6 hypothetical protein compare
BWI76_RS14265 +0.4 1.7 LysR family transcriptional regulator compare
BWI76_RS13130 +0.4 1.2 phenylacetic acid degradation protein PaaD compare
BWI76_RS21715 +0.4 1.1 transcriptional regulator compare
BWI76_RS14225 +0.4 1.8 anti-ECF sigma factor ChrR compare
BWI76_RS04275 +0.4 2.0 molybdopterin adenylyltransferase compare
BWI76_RS00475 +0.4 2.0 sulfurtransferase FdhD compare
BWI76_RS12595 +0.4 1.5 hypothetical protein compare
BWI76_RS14840 +0.4 1.3 hypothetical protein compare
BWI76_RS22110 +0.4 1.7 putative helix-turn-helix AraC-type transcriptional regulator compare
BWI76_RS09475 +0.4 1.5 putrescine ABC transporter permease PotI compare
BWI76_RS19380 +0.4 2.2 hydroxyethylthiazole kinase compare
BWI76_RS19805 +0.4 1.8 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS03100 +0.4 2.1 protein iolH compare
BWI76_RS07645 +0.4 1.1 short-chain dehydrogenase/reductase compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source Parabanic Acid in Klebsiella michiganensis M5al

For nitrogen source Parabanic Acid across organisms