Experiment set6IT059 for Shewanella loihica PV-4
LB with Phosphomycin disodium salt 0.12 mg/ml
Group: stressMedia: LB + Phosphomycin disodium salt (0.12 mg/ml)
Culturing: PV4_ML1, 48 well microplate; Tecan Infinite F200, Aerobic, at 28 (C), shaken=orbital
By: Mark on 1/14/2015
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Growth plate: 1089 E5,E6
Specific Phenotypes
For 4 genes in this experiment
For stress Phosphomycin disodium salt in Shewanella loihica PV-4
For stress Phosphomycin disodium salt across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Glycerolipid and Glycerophospholipid Metabolism in Bacteria | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| cardiolipin biosynthesis II | 3 | 3 | 1 |
| cardiolipin biosynthesis I | 3 | 2 | 1 |
| cardiolipin biosynthesis III | 3 | 2 | 1 |
| phosphatidylglycerol biosynthesis I | 6 | 6 | 1 |
| phosphatidylglycerol biosynthesis II | 6 | 6 | 1 |
| superpathway of phospholipid biosynthesis III (E. coli) | 12 | 10 | 1 |
| superpathway of cardiolipin biosynthesis (bacteria) | 13 | 9 | 1 |
| type I lipoteichoic acid biosynthesis (S. aureus) | 17 | 5 | 1 |
| superpathway of phospholipid biosynthesis II (plants) | 28 | 10 | 1 |