Experiment set6IT059 for Klebsiella michiganensis M5al

Compare to:

D-Alanine nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -8.9 -5.8 colicin V production protein compare
BWI76_RS20895 -7.3 -5.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00850 -7.2 -11.2 acetylglutamate kinase compare
BWI76_RS18955 -7.1 -4.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00855 -7.0 -8.3 argininosuccinate lyase compare
BWI76_RS04465 -6.9 -6.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS04470 -6.8 -10.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS18930 -6.8 -5.2 histidinol-phosphate transaminase compare
BWI76_RS27385 -6.6 -6.4 orotate phosphoribosyltransferase compare
BWI76_RS25320 -6.6 -10.1 glutamate synthase compare
BWI76_RS08385 -6.6 -3.8 citrate (Si)-synthase compare
BWI76_RS04255 -6.6 -10.1 threonine synthase compare
BWI76_RS07070 -6.5 -6.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21475 -6.5 -7.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00805 -6.5 -5.7 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00990 -6.5 -9.9 ketol-acid reductoisomerase compare
BWI76_RS09755 -6.2 -8.6 phosphoserine transaminase compare
BWI76_RS02995 -6.1 -9.9 aspartate carbamoyltransferase compare
BWI76_RS20965 -6.0 -4.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04250 -6.0 -9.9 homoserine kinase compare
BWI76_RS05015 -5.9 -4.1 transcriptional regulator compare
BWI76_RS00980 -5.9 -12.6 PLP-dependent threonine dehydratase compare
BWI76_RS04675 -5.9 -5.7 3-isopropylmalate dehydrogenase compare
BWI76_RS26085 -5.9 -3.8 3-dehydroquinate synthase compare
BWI76_RS18920 -5.8 -4.9 ATP phosphoribosyltransferase compare
BWI76_RS11965 -5.8 -4.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04670 -5.7 -10.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS11855 -5.7 -7.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00385 -5.6 -8.5 nitrogen assimilation regulatory protein compare
BWI76_RS05835 -5.6 -4.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS23220 -5.6 -8.5 amino-acid N-acetyltransferase compare
BWI76_RS24285 -5.6 -9.4 cystathionine beta-lyase compare
BWI76_RS04645 -5.6 -8.5 3-dehydroquinase compare
BWI76_RS18940 -5.5 -6.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00390 -5.5 -8.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS04665 -5.4 -19.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00785 -5.3 -8.0 cystathionine gamma-synthase compare
BWI76_RS23920 -5.3 -7.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS22805 -5.2 -10.8 GTP diphosphokinase compare
BWI76_RS09910 -5.1 -16.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS00965 -5.1 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS00845 -5.0 -9.4 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS25315 -5.0 -11.2 glutamate synthase large subunit compare
BWI76_RS00400 -5.0 -3.2 glutamine synthetase compare
BWI76_RS04160 -4.9 -5.2 phosphoserine phosphatase compare
BWI76_RS18925 -4.9 -6.3 histidinol dehydrogenase compare
BWI76_RS25115 -4.9 -6.5 argininosuccinate synthase compare
BWI76_RS18935 -4.8 -7.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS05840 -4.8 -5.5 glutamate 5-kinase compare
BWI76_RS03010 -4.8 -8.8 ornithine carbamoyltransferase compare
BWI76_RS21465 -4.8 -6.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04245 -4.8 -11.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00835 -4.7 -14.7 phosphoenolpyruvate carboxylase compare
BWI76_RS04685 -4.7 -8.5 putative leucine operon leader peptide compare
BWI76_RS10990 -4.7 -4.2 dihydroorotase compare
BWI76_RS21265 -4.6 -10.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS04240 -4.6 -2.0 thr operon leader peptide compare
BWI76_RS01615 -4.5 -8.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00975 -4.5 -10.2 dihydroxy-acid dehydratase compare
BWI76_RS01610 -4.4 -9.2 phosphoribosylamine--glycine ligase compare
BWI76_RS01655 -4.4 -4.5 homoserine O-succinyltransferase compare
BWI76_RS23360 -4.4 -5.3 diaminopimelate decarboxylase compare
BWI76_RS18950 -4.4 -4.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS27390 -4.3 -4.0 ribonuclease PH compare
BWI76_RS20350 -4.3 -6.2 amidophosphoribosyltransferase compare
BWI76_RS11860 -4.3 -8.6 anthranilate synthase component I compare
BWI76_RS17735 -4.3 -7.2 D-amino acid dehydrogenase small subunit conserved
BWI76_RS04680 -4.2 -9.6 2-isopropylmalate synthase compare
BWI76_RS09760 -4.2 -3.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00140 -4.1 -1.6 phosphate transport system regulator PhoU compare
BWI76_RS11850 -4.1 -6.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS23230 -4.1 -4.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS23240 -4.1 -4.8 exonuclease V subunit gamma compare
BWI76_RS23365 -4.1 -9.4 LysR family transcriptional regulator compare
BWI76_RS25645 -4.1 -7.7 shikimate dehydrogenase compare
BWI76_RS11845 -3.9 -4.0 tryptophan synthase subunit beta compare
BWI76_RS02530 -3.7 -3.6 tRNA dimethylallyltransferase compare
BWI76_RS22755 -3.7 -8.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS07065 -3.6 -7.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS09645 -3.6 -1.9 thioredoxin-disulfide reductase compare
BWI76_RS05120 -3.6 -7.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS08525 -3.5 -5.3 colicin transporter compare
BWI76_RS26460 -3.5 -9.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS01210 -3.5 -3.0 tyrosine recombinase XerC compare
BWI76_RS05200 -3.3 -3.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS22765 -3.3 -10.3 sulfite reductase subunit alpha compare
BWI76_RS11840 -3.2 -2.0 tryptophan synthase subunit alpha compare
BWI76_RS16965 -3.1 -5.1 murein lipoprotein compare
BWI76_RS06525 -3.0 -5.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS20435 -3.0 -1.5 chorismate synthase compare
BWI76_RS17720 -3.0 -1.9 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS26455 -2.6 -4.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09655 -2.5 -3.9 leucine-responsive regulatory protein compare
BWI76_RS06605 -2.4 -8.0 ammonium transporter conserved
BWI76_RS22760 -2.3 -5.0 sulfite reductase subunit beta compare
BWI76_RS08535 -2.3 -3.4 translocation protein TolB compare
BWI76_RS15825 -2.2 -2.1 hypothetical protein compare
BWI76_RS02735 -2.2 -4.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS17980 -2.2 -5.1 RNA chaperone ProQ compare
BWI76_RS17975 -2.2 -6.6 tail-specific protease compare
BWI76_RS08530 -2.1 -3.0 protein TolA compare
BWI76_RS00345 -2.0 -4.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS06535 -2.0 -6.5 endopeptidase La compare
BWI76_RS20640 -1.9 -4.8 cysteine synthase A compare
BWI76_RS23885 -1.9 -1.8 2-octaprenylphenol hydroxylase compare
BWI76_RS00985 -1.9 -4.8 transcriptional regulator IlvY compare
BWI76_RS09615 -1.9 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS16360 -1.9 -1.7 electron transport complex subunit RsxB compare
BWI76_RS01350 -1.8 -1.3 NAD(P)H-flavin reductase compare
BWI76_RS09190 -1.8 -4.1 hypothetical protein compare
BWI76_RS25065 -1.8 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS08180 -1.7 -5.8 asparagine synthase B compare
BWI76_RS15975 -1.7 -1.6 hypothetical protein compare
BWI76_RS22690 -1.7 -1.8 adenylyl-sulfate kinase compare
BWI76_RS21070 -1.7 -2.3 outer membrane protein assembly factor BamB compare
BWI76_RS00240 -1.6 -3.1 FMN-binding protein MioC compare
BWI76_RS26055 -1.6 -6.7 siroheme synthase compare
BWI76_RS22695 -1.6 -4.5 sulfate adenylyltransferase compare
BWI76_RS19495 -1.6 -1.4 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS21450 -1.6 -2.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS02410 -1.6 -2.0 EF-P beta-lysylation protein EpmB compare
BWI76_RS23265 -1.6 -4.4 hypothetical protein compare
BWI76_RS09660 -1.5 -1.7 DNA translocase FtsK compare
BWI76_RS15835 -1.5 -0.9 hypothetical protein compare
BWI76_RS21480 -1.5 -4.9 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS23480 -1.5 -8.3 EAL domain-containing protein compare
BWI76_RS24465 -1.4 -8.4 adenylate cyclase compare
BWI76_RS05005 -1.4 -2.7 polynucleotide adenylyltransferase compare
BWI76_RS04305 -1.4 -1.4 molecular chaperone DnaJ compare
BWI76_RS05260 -1.4 -1.7 chaperone compare
BWI76_RS09970 -1.4 -4.0 porin OmpA compare
BWI76_RS13595 -1.4 -3.5 transcriptional regulator compare
BWI76_RS04715 -1.4 -1.9 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS25070 -1.4 -1.5 hypothetical protein compare
BWI76_RS04510 -1.3 -2.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS21140 -1.3 -1.8 molecular chaperone HscA compare
BWI76_RS12390 -1.3 -2.6 antibiotic biosynthesis monooxygenase compare
BWI76_RS02990 -1.3 -4.1 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS04270 -1.3 -3.4 transaldolase compare
BWI76_RS19585 -1.3 -3.0 gentisate 1,2-dioxygenase compare
BWI76_RS17400 -1.3 -1.3 transporter compare
BWI76_RS01630 -1.2 -1.1 16S ribosomal RNA compare
BWI76_RS15810 -1.2 -3.8 hypothetical protein compare
BWI76_RS14415 -1.2 -1.8 transcriptional regulator, TetR family protein compare
BWI76_RS15830 -1.2 -2.1 hypothetical protein compare
BWI76_RS14915 -1.2 -2.1 hypothetical protein compare
BWI76_RS01885 -1.2 -1.3 CsbD family protein compare
BWI76_RS09195 -1.2 -1.4 N-acetyltransferase compare
BWI76_RS25425 -1.1 -1.9 arginine repressor compare
BWI76_RS27440 -1.1 -3.0 DNA helicase RecG compare
BWI76_RS08210 -1.1 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS14005 -1.1 -1.8 TetR family transcriptional regulator compare
BWI76_RS23270 -1.1 -7.0 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS06595 -1.1 -1.9 hypothetical protein compare
BWI76_RS06015 -1.1 -1.5 hypothetical protein compare
BWI76_RS02700 -1.1 -5.9 D-serine/D-alanine/glycine transporter compare
BWI76_RS11700 -1.1 -1.4 hypothetical protein compare
BWI76_RS05975 -1.1 -2.5 ABC transporter ATP-binding protein compare
BWI76_RS19730 -1.1 -3.4 1-phosphofructokinase compare
BWI76_RS20880 -1.1 -2.0 esterase compare
BWI76_RS20440 -1.1 -1.6 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS09610 -1.0 -2.5 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS06495 -1.0 -4.7 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS19040 -1.0 -3.9 hypothetical protein compare
BWI76_RS20380 -1.0 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS20695 -1.0 -2.2 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS17300 -1.0 -1.1 tRNA-Tyr compare
BWI76_RS22950 -1.0 -2.0 membrane protein compare
BWI76_RS08520 -1.0 -1.9 colicin transporter TolQ compare
BWI76_RS14305 -1.0 -2.7 metallophosphoesterase compare
BWI76_RS19035 -1.0 -4.1 dTDP-rhamnosyl transferase compare
BWI76_RS18455 -1.0 -1.1 tRNA-Ser compare
BWI76_RS09650 -1.0 -3.3 hypothetical protein compare
BWI76_RS04705 -1.0 -3.9 DNA-binding transcriptional regulator FruR compare
BWI76_RS22700 -1.0 -3.9 sulfate adenylyltransferase subunit 2 compare
BWI76_RS21350 -1.0 -1.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS15840 -1.0 -2.1 prophage protein compare
BWI76_RS26440 -1.0 -1.3 hypothetical protein compare
BWI76_RS21100 -1.0 -2.6 nucleoside-diphosphate kinase compare
BWI76_RS26000 -1.0 -2.8 aspartate aminotransferase family protein compare
BWI76_RS00430 -1.0 -3.7 GNAT family N-acetyltransferase compare
BWI76_RS15660 -1.0 -0.8 hypothetical protein compare
BWI76_RS05450 -1.0 -1.2 ribonuclease HI compare
BWI76_RS19865 -1.0 -2.0 ecotin compare
BWI76_RS26175 -1.0 -3.3 DeoR/GlpR family transcriptional regulator compare
BWI76_RS00025 -0.9 -0.8 hypothetical protein compare
BWI76_RS12495 -0.9 -1.5 2-Cys peroxiredoxin compare
BWI76_RS25060 -0.9 -2.0 lipoprotein NlpI compare
BWI76_RS01220 -0.9 -3.6 DNA-dependent helicase II compare
BWI76_RS26075 -0.9 -1.9 DNA adenine methylase compare
BWI76_RS13445 -0.9 -1.5 alpha/beta hydrolase compare
BWI76_RS20490 -0.9 -1.8 hypothetical protein compare
BWI76_RS15990 -0.9 -3.1 serine protease compare
BWI76_RS04875 -0.9 -2.3 transcriptional regulator PdhR compare
BWI76_RS19010 -0.9 -1.9 polysaccharide pyruvyl transferase yvff compare
BWI76_RS13245 -0.9 -1.9 DNA-damage-inducible protein I compare
BWI76_RS26390 -0.9 -2.8 cell division protein FtsX compare
BWI76_RS16805 -0.9 -1.4 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS00960 -0.9 -3.9 acetolactate synthase 2 catalytic subunit compare
BWI76_RS24600 -0.9 -3.0 dihydroxyacetone kinase compare


Specific Phenotypes

For 3 genes in this experiment

For nitrogen source D-Alanine in Klebsiella michiganensis M5al

For nitrogen source D-Alanine across organisms