Experiment set6IT058 for Klebsiella michiganensis M5al

Compare to:

D-Serine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS05570 +1.6 3.0 hypothetical protein compare
BWI76_RS06340 +1.4 2.3 hypothetical protein compare
BWI76_RS01205 +1.4 4.6 DUF484 family protein compare
BWI76_RS19770 +1.3 2.9 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS06680 +1.3 2.2 hypothetical protein compare
BWI76_RS18240 +1.2 2.6 L-arabinose ABC transporter permease AraH compare
BWI76_RS08650 +1.0 3.3 molybdate ABC transporter permease compare
BWI76_RS17400 +1.0 1.9 transporter compare
BWI76_RS04900 +1.0 1.9 DUF2950 domain-containing protein compare
BWI76_RS15350 +1.0 1.9 hypothetical protein compare
BWI76_RS17370 +0.9 1.8 nitrate transporter NasD compare
BWI76_RS13250 +0.9 1.8 cytochrome b561 compare
BWI76_RS07510 +0.9 1.6 hypothetical protein compare
BWI76_RS03045 +0.9 1.6 hypothetical protein compare
BWI76_RS08620 +0.9 3.1 galactose-1-phosphate uridylyltransferase compare
BWI76_RS07740 +0.9 1.8 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS15095 +0.9 2.3 isochorismatase compare
BWI76_RS11170 +0.8 1.6 hypothetical protein compare
BWI76_RS22450 +0.8 1.4 selenoprotein W-related protein compare
BWI76_RS05075 +0.8 1.5 type II secretion system protein GspG compare
BWI76_RS22815 +0.8 5.8 hybrid sensor histidine kinase/response regulator compare
BWI76_RS12545 +0.8 2.3 hypothetical protein compare
BWI76_RS15290 +0.8 1.6 transcriptional regulator compare
BWI76_RS15195 +0.8 2.0 DUF4186 domain-containing protein compare
BWI76_RS21375 +0.8 2.0 autonomous glycyl radical cofactor GrcA compare
BWI76_RS23320 +0.8 1.6 hypothetical protein compare
BWI76_RS21200 +0.8 2.0 aldose epimerase compare
BWI76_RS03105 +0.8 1.3 myo-inosose-2 dehydratase compare
BWI76_RS18430 +0.8 1.4 hypothetical protein compare
BWI76_RS09230 +0.8 1.6 hypothetical protein compare
BWI76_RS12185 +0.8 1.8 hypothetical protein compare
BWI76_RS08310 +0.8 2.7 potassium-transporting ATPase subunit C compare
BWI76_RS20360 +0.8 1.3 cell division protein DedD compare
BWI76_RS13785 +0.8 1.2 ABC transporter permease compare
BWI76_RS05070 +0.8 2.2 type II secretion system protein GspH compare
BWI76_RS22850 +0.8 2.2 tRNA pseudouridine synthase TruC compare
BWI76_RS15190 +0.8 3.7 GGDEF domain-containing protein compare
BWI76_RS14825 +0.8 2.5 dienelactone hydrolase family protein compare
BWI76_RS06290 +0.7 2.2 ACP phosphodiesterase compare
BWI76_RS17805 +0.7 1.3 membrane protein compare
BWI76_RS17945 +0.7 1.6 hypothetical protein compare
BWI76_RS26130 +0.7 1.8 ADP compounds hydrolase NudE compare
BWI76_RS24955 +0.7 1.9 hypothetical protein compare
BWI76_RS27605 +0.7 1.9 hypothetical protein compare
BWI76_RS15260 +0.7 1.5 hypothetical protein compare
BWI76_RS09690 +0.7 1.9 dimethyl sulfoxide reductase compare
BWI76_RS07780 +0.7 1.5 hypothetical protein compare
BWI76_RS19465 +0.7 2.3 hypothetical protein compare
BWI76_RS06325 +0.7 1.0 hypothetical protein compare
BWI76_RS27875 +0.7 0.8 membrane protein compare
BWI76_RS14225 +0.7 2.3 anti-ECF sigma factor ChrR compare
BWI76_RS05655 +0.7 3.0 hypothetical protein compare
BWI76_RS16745 +0.7 3.7 alpha-acetolactate decarboxylase compare
BWI76_RS02810 +0.7 2.3 sugar ABC transporter permease YjfF compare
BWI76_RS24080 +0.7 1.2 DUF179 domain-containing protein compare
BWI76_RS18060 +0.7 3.5 hypothetical protein compare
BWI76_RS21570 +0.7 2.1 RnfH family protein compare
BWI76_RS00450 +0.7 1.9 formate dehydrogenase accessory protein FdhE compare
BWI76_RS20085 +0.7 2.8 GNAT family N-acetyltransferase compare
BWI76_RS04440 +0.6 2.6 citrate lyase ACP compare
BWI76_RS12870 +0.6 2.0 putative phytanoyl-CoA dioxygenase compare
BWI76_RS06060 +0.6 3.3 DNA-binding response regulator compare
BWI76_RS04850 +0.6 3.7 N-acetylmuramoyl-L-alanine amidase conserved
BWI76_RS15950 +0.6 1.7 dethiobiotin synthase compare
BWI76_RS05520 +0.6 2.7 hypothetical protein compare
BWI76_RS11300 +0.6 1.0 cupin compare
BWI76_RS24740 +0.6 2.1 GntR family transcriptional regulator compare
BWI76_RS00760 +0.6 3.1 cell division protein FtsN compare
BWI76_RS27610 +0.6 1.7 hydroxyacid dehydrogenase compare
BWI76_RS00590 +0.6 0.9 hypothetical protein compare
BWI76_RS11820 +0.6 0.9 short-chain dehydrogenase/reductase SDR compare
BWI76_RS13685 +0.6 1.7 IclR family transcriptional regulator compare
BWI76_RS11445 +0.6 2.9 hypothetical protein compare
BWI76_RS18600 +0.6 2.1 HupC/HyaC/HydC family protein compare
BWI76_RS12235 +0.6 0.7 hypothetical protein compare
BWI76_RS26630 +0.6 2.6 pimeloyl-[acyl-carrier protein] methyl ester esterase compare
BWI76_RS14480 +0.6 3.2 hypothetical protein compare
BWI76_RS23905 +0.6 5.0 Z-ring-associated protein compare
BWI76_RS19845 +0.6 2.2 phosphatase compare
BWI76_RS07845 +0.6 1.9 LacI family transcriptional regulator compare
BWI76_RS11255 +0.6 1.5 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS26290 +0.6 2.2 glycerol-3-phosphate ABC transporter ATP-binding protein compare
BWI76_RS14935 +0.6 0.9 NIPSNAP family containing protein compare
BWI76_RS19390 +0.6 2.4 LysR family transcriptional regulator compare
BWI76_RS13575 +0.6 2.4 sugar binding transcriptional regulator, LacI family protein compare
BWI76_RS15960 +0.6 1.5 LysR family transcriptional regulator compare
BWI76_RS04050 +0.6 1.4 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS01335 +0.6 1.5 DNase TatD compare
BWI76_RS03310 +0.6 1.7 AraC family transcriptional regulator compare
BWI76_RS13880 +0.6 1.5 lysine transporter LysE compare
BWI76_RS27200 +0.6 1.7 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS15205 +0.6 1.0 succinate-semialdehyde dehydrogenase compare
BWI76_RS13630 +0.6 1.0 ABC transporter compare
BWI76_RS05525 +0.6 2.4 glycerophosphodiester phosphodiesterase compare
BWI76_RS10975 +0.6 2.0 N-methyltryptophan oxidase compare
BWI76_RS20390 +0.6 1.0 erythronate-4-phosphate dehydrogenase compare
BWI76_RS14680 +0.6 1.5 SefF compare
BWI76_RS12170 +0.6 2.1 hypothetical protein compare
BWI76_RS23015 +0.6 1.1 cobalt transporter ATP-binding subunit compare
BWI76_RS24035 +0.6 1.8 hypothetical protein compare
BWI76_RS02820 +0.6 4.1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase conserved
BWI76_RS15940 +0.6 1.6 DMSO reductase maturation protein DsmD compare
BWI76_RS21460 +0.6 1.0 translation inhibitor protein RaiA compare
BWI76_RS16740 +0.5 2.1 transcriptional regulator compare
BWI76_RS08280 +0.5 1.6 acyl-CoA esterase compare
BWI76_RS06120 +0.5 1.2 membrane protein compare
BWI76_RS15660 +0.5 0.7 hypothetical protein compare
BWI76_RS08545 +0.5 2.2 cell division protein CpoB compare
BWI76_RS08825 +0.5 1.8 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS21075 +0.5 0.5 membrane protein compare
BWI76_RS23825 +0.5 2.2 hypothetical protein compare
BWI76_RS26755 +0.5 3.1 peptidase M16 compare
BWI76_RS09860 +0.5 1.4 hypothetical protein compare
BWI76_RS07955 +0.5 0.9 nucleoside diphosphate kinase regulator compare
BWI76_RS19935 +0.5 1.1 hypothetical protein compare
BWI76_RS18335 +0.5 2.9 DNA-binding response regulator compare
BWI76_RS00880 +0.5 2.3 membrane protein compare
BWI76_RS19775 +0.5 1.2 phage resistance protein compare
BWI76_RS09640 +0.5 1.6 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS03610 +0.5 2.0 hypothetical protein compare
BWI76_RS14325 +0.5 1.4 maturase compare
BWI76_RS15450 +0.5 1.8 hypothetical protein compare
BWI76_RS18390 +0.5 1.9 hypothetical protein compare
BWI76_RS14895 +0.5 1.8 3-oxoacyl-ACP reductase compare
BWI76_RS11895 +0.5 1.4 AraC family transcriptional regulator compare
BWI76_RS18845 +0.5 2.5 nitrogen fixation protein NifX compare
BWI76_RS12345 +0.5 1.5 nitrite transporter compare
BWI76_RS04960 +0.5 2.2 carbonate dehydratase compare
BWI76_RS11865 +0.5 2.2 phosphatase compare
BWI76_RS00345 +0.5 0.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS17900 +0.5 3.5 PTS mannose transporter subunit IID compare
BWI76_RS17735 +0.5 1.8 D-amino acid dehydrogenase small subunit compare
BWI76_RS13950 +0.5 1.2 hypothetical protein compare
BWI76_RS13770 +0.5 1.4 alkylhydroperoxidase domain protein compare
BWI76_RS13710 +0.5 1.6 benzoate 1,2-dioxygenase small subunit compare
BWI76_RS20890 +0.5 1.3 neutral zinc metallopeptidase compare
BWI76_RS17470 +0.5 0.9 MerR family transcriptional regulator compare
BWI76_RS26410 +0.5 0.8 membrane protein compare
BWI76_RS09630 +0.5 2.0 leucyl/phenylalanyl-tRNA--protein transferase compare
BWI76_RS12715 +0.5 1.6 universal stress protein F compare
BWI76_RS05435 +0.5 3.3 murein transglycosylase D compare
BWI76_RS15845 +0.5 0.7 hypothetical protein compare
BWI76_RS14870 +0.5 1.4 hypothetical protein compare
BWI76_RS26010 +0.5 2.5 cell filamentation protein Fic compare
BWI76_RS04895 +0.5 1.3 hypothetical protein compare
BWI76_RS26665 +0.5 1.4 DNA-binding response regulator compare
BWI76_RS20080 +0.5 2.9 isochorismate synthase MenF compare
BWI76_RS07460 +0.5 1.6 hypothetical protein compare
BWI76_RS10765 +0.5 1.8 pyrimidine utilization protein D compare
BWI76_RS10475 +0.5 1.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS11200 +0.5 1.2 transpeptidase compare
BWI76_RS04770 +0.5 2.8 D-alanine--D-alanine ligase compare
BWI76_RS05945 +0.5 1.5 amino acid ABC transporter permease compare
BWI76_RS09135 +0.5 1.0 oxidoreductase compare
BWI76_RS03430 +0.5 2.3 short-chain dehydrogenase compare
BWI76_RS05965 +0.5 1.1 hypothetical protein compare
BWI76_RS02580 +0.5 0.7 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS08985 +0.5 1.4 threonine/homoserine exporter RhtA compare
BWI76_RS22855 +0.5 2.0 hypothetical protein compare
BWI76_RS11575 +0.5 2.5 nicotinamidase/pyrazinamidase compare
BWI76_RS19275 +0.5 1.3 DNA-binding response regulator compare
BWI76_RS00710 +0.4 0.9 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS04175 +0.4 1.0 energy-dependent translational throttle protein EttA compare
BWI76_RS22205 +0.4 1.1 cation ABC transporter ATP-binding protein compare
BWI76_RS03825 +0.4 1.4 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS14540 +0.4 2.3 yersiniabactin biosynthetic protein YbtU compare
BWI76_RS18460 +0.4 2.3 DgsA anti-repressor MtfA compare
BWI76_RS07810 +0.4 2.7 sugar ABC transporter periplasmic sugar-binding protein compare
BWI76_RS26365 +0.4 2.1 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS19835 +0.4 1.8 nucleoid-associated protein YejK compare
BWI76_RS11235 +0.4 0.7 hypothetical protein compare
BWI76_RS14925 +0.4 1.5 ABC transporter substrate-binding protein compare
BWI76_RS10575 +0.4 0.6 polar amino acid ABC transporter permease compare
BWI76_RS06520 +0.4 2.3 trigger factor compare
BWI76_RS08510 +0.4 1.6 cyd operon protein YbgE compare
BWI76_RS20005 +0.4 1.7 membrane protein compare
BWI76_RS20730 +0.4 0.9 hypothetical protein compare
BWI76_RS09300 +0.4 2.8 phage lysozyme compare
BWI76_RS25270 +0.4 2.0 ribosome hibernation promoting factor compare
BWI76_RS19520 +0.4 2.2 acetyltransferase GCN5 compare
BWI76_RS12815 +0.4 1.7 transcriptional regulator FeaR compare
BWI76_RS16990 +0.4 1.0 ABC transporter ATP-binding protein compare
BWI76_RS17515 +0.4 2.0 dihydropyrimidinase compare
BWI76_RS26260 +0.4 2.1 hypothetical protein compare
BWI76_RS06440 +0.4 1.6 AP endonuclease compare
BWI76_RS17775 +0.4 1.3 hypothetical protein compare
BWI76_RS16450 +0.4 1.7 fusaric acid resistance protein compare
BWI76_RS03615 +0.4 2.0 putative transcriptional regulatory protein compare
BWI76_RS03800 +0.4 1.4 hypothetical protein compare
BWI76_RS26805 +0.4 1.2 cellulose biosynthesis protein BcsF compare
BWI76_RS26625 +0.4 1.9 gluconate transporter periplasmic gluconate-binding protein compare
BWI76_RS10260 +0.4 1.5 creatinase compare
BWI76_RS02625 +0.4 1.2 PTS ascorbate transporter subunit IIB compare
BWI76_RS14940 +0.4 1.3 hypothetical protein compare
BWI76_RS18040 +0.4 2.6 fimbrial assembly protein compare
BWI76_RS26350 +0.4 1.9 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS19755 +0.4 2.9 fructuronate reductase compare
BWI76_RS13640 +0.4 1.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS24265 +0.4 1.8 dienelactone hydrolase compare
BWI76_RS22235 +0.4 1.3 transcriptional regulator GutM compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source D-Serine in Klebsiella michiganensis M5al

For nitrogen source D-Serine across organisms