Experiment set6IT057 for Pseudomonas fluorescens FW300-N2E3

Compare to:

Minimal media pH6

200 most important genes:

  gene name fitness t score description  
AO353_13070 -4.9 -5.9 phosphoserine phosphatase compare
AO353_20665 -4.6 -11.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO353_05115 -4.5 -10.5 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO353_20540 -4.5 -8.5 aromatic amino acid aminotransferase compare
AO353_07230 -4.4 -16.9 anthranilate synthase compare
AO353_20625 -4.4 -4.3 3-isopropylmalate dehydratase compare
AO353_00825 -4.3 -6.5 porin compare
AO353_12090 -4.3 -2.9 imidazole glycerol phosphate synthase subunit HisF compare
AO353_10670 -4.3 -8.6 shikimate dehydrogenase compare
AO353_07220 -4.2 -9.0 anthranilate synthase compare
AO353_20620 -4.2 -7.4 isopropylmalate isomerase compare
AO353_12360 -4.2 -8.9 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO353_20635 -4.1 -14.8 3-isopropylmalate dehydrogenase compare
AO353_07155 -4.1 -7.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
AO353_02070 -4.1 -8.3 prephenate dehydratase compare
AO353_00310 -4.1 -10.4 transaldolase compare
AO353_12515 -4.0 -23.5 glutamate synthase compare
AO353_12520 -4.0 -12.9 glutamate synthase compare
AO353_08685 -4.0 -9.2 N-acetylglutamate synthase compare
AO353_24130 -3.9 -4.7 hypothetical protein compare
AO353_14400 -3.9 -3.8 Fis family transcriptional regulator compare
AO353_02075 -3.8 -12.9 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
AO353_19060 -3.8 -5.2 CysB family transcriptional regulator compare
AO353_08185 -3.8 -11.6 methionine biosynthesis protein MetW compare
AO353_13165 -3.8 -7.1 ATP phosphoribosyltransferase regulatory subunit compare
AO353_14505 -3.8 -14.3 ketol-acid reductoisomerase compare
AO353_08180 -3.8 -14.8 homoserine O-acetyltransferase compare
AO353_08345 -3.7 -9.9 dihydroxy-acid dehydratase compare
AO353_20695 -3.7 -7.5 O-succinylhomoserine sulfhydrylase compare
AO353_05110 -3.6 -13.8 histidinol dehydrogenase compare
AO353_12085 -3.6 -9.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO353_10710 -3.6 -7.3 tryptophan synthase subunit beta compare
AO353_14775 -3.6 -9.6 hypothetical protein compare
AO353_02975 -3.6 -4.9 aspartate kinase compare
AO353_12105 -3.6 -9.0 peptidase S41 compare
AO353_04105 -3.6 -10.2 argininosuccinate synthase compare
AO353_12075 -3.5 -8.8 imidazole glycerol phosphate synthase subunit HisH compare
AO353_08475 -3.5 -10.9 phosphoserine phosphatase compare
AO353_10950 -3.5 -12.5 thiol:disulfide interchange protein compare
AO353_15250 -3.4 -4.1 cytochrome B compare
AO353_03360 -3.4 -10.9 glucose-6-phosphate dehydrogenase compare
AO353_12365 -3.4 -5.2 phosphoribosyl-AMP cyclohydrolase compare
AO353_22800 -3.4 -4.0 sulfite reductase compare
AO353_14495 -3.4 -13.0 acetolactate synthase 3 catalytic subunit compare
AO353_12070 -3.4 -11.0 imidazoleglycerol-phosphate dehydratase compare
AO353_07355 -3.4 -7.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO353_09000 -3.4 -6.8 argininosuccinate lyase compare
AO353_07210 -3.3 -7.1 indole-3-glycerol-phosphate synthase compare
AO353_07215 -3.3 -9.7 anthranilate phosphoribosyltransferase compare
AO353_03415 -3.3 -7.6 glucokinase compare
AO353_14500 -3.3 -8.6 acetolactate synthase 3 regulatory subunit compare
AO353_08015 -3.2 -9.3 5,10-methylenetetrahydrofolate reductase compare
AO353_03615 -3.1 -4.7 cold-shock protein compare
AO353_16940 -3.1 -6.9 deoxycytidine triphosphate deaminase compare
AO353_06540 -3.1 -4.2 hypothetical protein compare
AO353_12500 -3.1 -2.1 shikimate kinase compare
AO353_03250 -3.1 -4.1 gluconokinase compare
AO353_10035 -3.1 -9.9 LysR family transcriptional regulator compare
AO353_02685 -3.1 -6.1 phosphoribosylglycinamide formyltransferase compare
AO353_07525 -3.0 -16.2 biotin synthase compare
AO353_04155 -3.0 -13.9 ornithine carbamoyltransferase compare
AO353_10025 -3.0 -16.5 pyruvate carboxylase subunit B compare
AO353_08780 -3.0 -9.3 5-formyltetrahydrofolate cyclo-ligase compare
AO353_07515 -3.0 -2.9 transporter compare
AO353_09240 -2.9 -4.4 acetylglutamate kinase compare
AO353_10030 -2.9 -12.9 pyruvate carboxylase subunit A compare
AO353_15445 -2.9 -4.7 disulfide bond formation protein B compare
AO353_08510 -2.8 -6.3 3-phosphoglycerate dehydrogenase compare
AO353_15925 -2.8 -11.6 2-isopropylmalate synthase compare
AO353_02250 -2.8 -5.3 chorismate synthase compare
AO353_09285 -2.7 -12.0 reactive intermediate/imine deaminase compare
AO353_07505 -2.7 -11.2 dethiobiotin synthetase compare
AO353_08045 -2.7 -15.2 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO353_09720 -2.6 -2.9 hypothetical protein compare
AO353_05105 -2.6 -10.2 histidinol-phosphate aminotransferase compare
AO353_03020 -2.6 -9.6 arginine N-succinyltransferase compare
AO353_14370 -2.6 -8.5 glucose-6-phosphate isomerase compare
AO353_06495 -2.6 -6.7 gamma-glutamyl phosphate reductase compare
AO353_20175 -2.5 -5.4 ATP-dependent Clp protease proteolytic subunit compare
AO353_12115 -2.5 -2.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
AO353_19360 -2.5 -3.4 peroxiredoxin compare
AO353_14115 -2.4 -7.7 gamma-glutamyl kinase compare
AO353_27650 -2.3 -6.4 cell division protein FtsK compare
AO353_07510 -2.3 -11.3 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO353_02710 -2.3 -13.9 (p)ppGpp synthetase compare
AO353_05075 -2.3 -11.8 adenylylsulfate kinase compare
AO353_05080 -2.3 -11.7 sulfate adenylyltransferase compare
AO353_07520 -2.2 -12.9 8-amino-7-oxononanoate synthase compare
AO353_13225 -2.2 -4.8 50S ribosomal protein L9 compare
AO353_03420 -2.2 -4.9 phosphogluconate dehydratase compare
AO353_13100 -2.1 -2.3 GTPase RsgA compare
AO353_14150 -2.1 -2.8 peptidylprolyl isomerase compare
AO353_03590 -2.1 -4.8 crossover junction endodeoxyribonuclease RuvC compare
AO353_11165 -2.1 -11.2 hypothetical protein compare
AO353_00490 -2.1 -2.5 PasA protein compare
AO353_06155 -2.1 -8.2 copper-transporting ATPase compare
AO353_13640 -2.0 -5.6 histidine kinase compare
AO353_08165 -2.0 -3.6 pyrroline-5-carboxylate reductase compare
AO353_15905 -1.9 -8.3 outer membrane protein assembly factor BamB compare
AO353_11850 -1.9 -4.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO353_14420 -1.9 -5.5 molecular chaperone DnaK compare
AO353_12145 -1.9 -4.9 nitrogen regulation protein NR(I) compare
AO353_13605 -1.9 -9.7 oxidoreductase compare
AO353_16890 -1.9 -8.1 virulence factor family protein compare
AO353_21625 -1.8 -3.6 Fe/S biogenesis protein NfuA compare
AO353_01375 -1.8 -6.9 phosphate acyltransferase compare
AO353_12345 -1.8 -2.6 twin-arginine protein translocation system subunit TatC compare
AO353_12690 -1.8 -1.7 acyl carrier protein compare
AO353_08115 -1.8 -7.4 energy transducer TonB compare
AO353_10705 -1.8 -4.2 tryptophan synthase subunit alpha compare
AO353_16895 -1.8 -12.9 hypothetical protein compare
AO353_04175 -1.8 -6.1 glycerol uptake facilitator GlpF compare
AO353_06040 -1.7 -4.3 exodeoxyribonuclease V subunit alpha compare
AO353_03425 -1.7 -8.7 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_08885 -1.7 -12.0 polyphosphate kinase compare
AO353_00660 -1.7 -3.5 transcriptional regulator compare
AO353_17035 -1.7 -4.5 hypothetical protein compare
AO353_02720 -1.7 -5.5 cysteine synthase compare
AO353_00430 -1.6 -4.1 glyceraldehyde-3-phosphate dehydrogenase compare
AO353_08350 -1.6 -6.5 hypothetical protein compare
AO353_00750 -1.6 -4.9 GntR family transcriptional regulator compare
AO353_18890 -1.6 -4.6 cytochrome C compare
AO353_03775 -1.6 -7.9 pyruvate kinase compare
AO353_03580 -1.6 -3.8 ATP-dependent DNA helicase RuvB compare
AO353_09890 -1.6 -4.8 phosphate ABC transporter ATP-binding protein compare
AO353_00635 -1.6 -3.8 hypothetical protein compare
AO353_06050 -1.6 -7.2 exodeoxyribonuclease V subunit gamma compare
AO353_03630 -1.5 -10.0 porin compare
AO353_20170 -1.5 -5.8 trigger factor compare
AO353_04520 -1.5 -5.1 elongation factor 4 compare
AO353_13140 -1.5 -6.4 tRNA dimethylallyltransferase compare
AO353_06850 -1.5 -4.7 MFS transporter compare
AO353_14740 -1.5 -4.1 GTP-binding protein compare
AO353_28425 -1.5 -4.1 TetR family transcriptional regulator compare
AO353_12650 -1.5 -1.7 hypothetical protein compare
AO353_16450 -1.5 -9.0 protein-PII uridylyltransferase compare
AO353_06045 -1.5 -6.8 exodeoxyribonuclease V subunit beta compare
AO353_12420 -1.4 -3.9 predicted FeS cluster maintenance protein (from data) compare
AO353_11530 -1.4 -6.7 diguanylate cyclase compare
AO353_05690 -1.4 -4.0 SsrA-binding protein compare
AO353_03245 -1.4 -7.6 permease DsdX compare
AO353_02595 -1.4 -3.4 cobalamin synthase compare
AO353_09045 -1.4 -1.9 hypothetical protein compare
AO353_02440 -1.4 -9.2 peptidase S41 compare
AO353_03710 -1.4 -3.2 formyltetrahydrofolate deformylase compare
AO353_04355 -1.3 -2.0 homoserine dehydrogenase compare
AO353_10040 -1.3 -6.6 transcriptional regulator compare
AO353_14395 -1.3 -4.4 poly(A) polymerase compare
AO353_13610 -1.3 -4.2 precorrin isomerase compare
AO353_02810 -1.3 -6.9 histidine kinase compare
AO353_05150 -1.3 -5.0 ABC transporter ATP-binding protein compare
AO353_08505 -1.3 -8.1 FAD-linked oxidase compare
AO353_10945 -1.3 -3.0 cytochrome C compare
AO353_03795 -1.3 -3.8 fumarate hydratase compare
AO353_04240 -1.2 -2.1 chemotaxis protein CheW compare
AO353_10435 -1.2 -7.4 chromosome partitioning protein compare
AO353_06415 -1.2 -3.4 hypothetical protein compare
AO353_00650 -1.2 -2.6 cytochrome biogenesis protein compare
AO353_24425 -1.2 -2.8 amino acid ABC transporter permease compare
AO353_29340 -1.1 -2.3 transporter compare
AO353_06320 -1.1 -4.0 AsnC family transcriptional regulator compare
AO353_22700 -1.1 -2.2 LexA family transcriptional regulator compare
AO353_01410 -1.1 -2.6 ribonuclease E compare
AO353_15185 -1.1 -4.1 ATPase compare
AO353_14405 -1.1 -6.9 ATPase compare
AO353_04565 -1.1 -4.8 nucleoid-associated protein compare
AO353_23220 -1.1 -2.6 hypothetical protein compare
AO353_16440 -1.1 -2.6 ArsC family transcriptional regulator compare
AO353_02270 -1.1 -4.0 isochorismatase compare
AO353_09060 -1.1 -2.1 hypothetical protein compare
AO353_03235 -1.1 -5.8 glutamate-pyruvate aminotransferase compare
AO353_00515 -1.1 -2.9 hypothetical protein compare
AO353_24440 -1.1 -2.6 reactive intermediate/imine deaminase compare
AO353_03015 -1.1 -3.2 arginine N-succinyltransferase compare
AO353_03025 -1.0 -3.1 acetylornithine aminotransferase compare
AO353_21615 -1.0 -7.0 methionine synthase compare
AO353_01780 -1.0 -6.5 heat-shock protein Hsp90 compare
AO353_12315 -1.0 -7.4 glucosyltransferase MdoH compare
AO353_00810 -1.0 -3.1 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) compare
AO353_04190 -1.0 -1.9 glycerol-3-phosphate dehydrogenase compare
AO353_02060 -1.0 -3.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
AO353_16880 -1.0 -7.3 potassium transporter Kup compare
AO353_27160 -1.0 -3.4 Pathogenicity locus compare
AO353_13620 -1.0 -6.7 precorrin-3B C17-methyltransferase compare
AO353_03385 -1.0 -5.5 sugar ABC transporter permease compare
AO353_09905 -1.0 -6.3 phosphate-binding protein compare
AO353_20630 -1.0 -4.8 SAM-dependent methyltransferase compare
AO353_05145 -1.0 -4.0 ABC transporter permease compare
AO353_06160 -1.0 -3.9 transcriptional regulator compare
AO353_03670 -1.0 -3.2 ornithine acetyltransferase compare
AO353_21635 -1.0 -3.5 cobalamin biosynthesis protein CobE compare
AO353_10445 -1.0 -1.2 tRNA uridine 5-carboxymethylaminomethyl modification protein compare
AO353_04365 -0.9 -2.9 recombinase XerD compare
AO353_25340 -0.9 -3.5 triphosphoribosyl-dephospho-CoA synthase MdcB compare
AO353_02620 -0.9 -4.1 threonine-phosphate decarboxylase compare
AO353_09260 -0.9 -4.7 ribonuclease PH compare
AO353_00590 -0.9 -3.9 cytochrome C oxidase Cbb3 compare
AO353_00330 -0.9 -5.8 hypothetical protein compare
AO353_05010 -0.9 -1.1 HopJ type III effector protein compare
AO353_02600 -0.9 -1.8 alpha-ribazole phosphatase compare


Specific Phenotypes

For 2 genes in this experiment