Experiment set6IT057 for Klebsiella michiganensis M5al

Compare to:

L-Tryptophan nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -7.8 -4.3 tyrosine recombinase XerC compare
BWI76_RS18925 -7.8 -4.8 histidinol dehydrogenase compare
BWI76_RS00855 -7.5 -5.2 argininosuccinate lyase compare
BWI76_RS04255 -7.2 -7.1 threonine synthase compare
BWI76_RS18920 -7.2 -4.5 ATP phosphoribosyltransferase compare
BWI76_RS05835 -7.0 -4.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS25115 -6.3 -8.2 argininosuccinate synthase compare
BWI76_RS04250 -6.0 -7.3 homoserine kinase compare
BWI76_RS23360 -6.0 -3.6 diaminopimelate decarboxylase compare
BWI76_RS00385 -6.0 -10.0 nitrogen assimilation regulatory protein compare
BWI76_RS18950 -5.9 -5.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00850 -5.8 -8.7 acetylglutamate kinase compare
BWI76_RS05015 -5.8 -3.7 transcriptional regulator compare
BWI76_RS04465 -5.4 -6.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00845 -5.4 -10.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04160 -5.2 -4.5 phosphoserine phosphatase compare
BWI76_RS09645 -5.1 -1.6 thioredoxin-disulfide reductase compare
BWI76_RS23920 -5.1 -4.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04305 -5.1 -1.6 molecular chaperone DnaJ compare
BWI76_RS18940 -5.1 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS02530 -5.1 -3.5 tRNA dimethylallyltransferase compare
BWI76_RS11435 -5.0 -2.7 hypothetical protein compare
BWI76_RS00390 -5.0 -5.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS20965 -5.0 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00965 -5.0 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS01615 -4.9 -7.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09760 -4.9 -5.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS07070 -4.9 -4.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS27385 -4.9 -7.8 orotate phosphoribosyltransferase compare
BWI76_RS00400 -4.9 -2.6 glutamine synthetase compare
BWI76_RS08385 -4.8 -4.4 citrate (Si)-synthase compare
BWI76_RS02995 -4.8 -7.2 aspartate carbamoyltransferase compare
BWI76_RS23220 -4.7 -7.5 amino-acid N-acetyltransferase compare
BWI76_RS20355 -4.7 -2.4 colicin V production protein compare
BWI76_RS09755 -4.5 -4.7 phosphoserine transaminase compare
BWI76_RS20895 -4.5 -6.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05840 -4.4 -4.4 glutamate 5-kinase compare
BWI76_RS03010 -4.3 -9.4 ornithine carbamoyltransferase compare
BWI76_RS01925 -4.3 -8.9 aromatic amino acid aminotransferase compare
BWI76_RS23230 -4.3 -3.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS05200 -4.2 -2.9 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS26085 -4.2 -2.9 3-dehydroquinate synthase compare
BWI76_RS11965 -4.1 -3.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00990 -4.1 -8.4 ketol-acid reductoisomerase compare
BWI76_RS15660 -4.1 -1.3 hypothetical protein compare
BWI76_RS18930 -4.0 -5.6 histidinol-phosphate transaminase compare
BWI76_RS09660 -4.0 -2.8 DNA translocase FtsK compare
BWI76_RS10990 -4.0 -3.8 dihydroorotase compare
BWI76_RS06015 -4.0 -1.8 hypothetical protein compare
BWI76_RS25065 -3.9 -3.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00975 -3.9 -11.8 dihydroxy-acid dehydratase compare
BWI76_RS21265 -3.8 -10.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS22755 -3.8 -5.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18935 -3.8 -3.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04675 -3.7 -4.5 3-isopropylmalate dehydrogenase compare
BWI76_RS09910 -3.7 -14.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS16235 -3.6 -3.2 membrane protein compare
BWI76_RS22690 -3.6 -4.5 adenylyl-sulfate kinase compare
BWI76_RS22805 -3.5 -7.7 GTP diphosphokinase compare
BWI76_RS04645 -3.5 -3.3 3-dehydroquinase compare
BWI76_RS21465 -3.4 -3.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04245 -3.4 -11.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS08535 -3.4 -3.2 translocation protein TolB compare
BWI76_RS20350 -3.4 -5.1 amidophosphoribosyltransferase compare
BWI76_RS00345 -3.4 -5.4 protein disulfide oxidoreductase DsbA compare
BWI76_RS04470 -3.3 -6.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS08180 -3.3 -5.7 asparagine synthase B compare
BWI76_RS27390 -3.3 -5.2 ribonuclease PH compare
BWI76_RS06530 -3.3 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS04240 -3.2 -2.8 thr operon leader peptide compare
BWI76_RS01610 -3.2 -5.8 phosphoribosylamine--glycine ligase compare
BWI76_RS04670 -3.2 -7.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS05990 -3.2 -4.8 branched-chain amino acid ABC transporter permease compare
BWI76_RS21370 -3.1 -2.2 ATP-dependent RNA helicase SrmB compare
BWI76_RS27430 -3.1 -1.4 (p)ppGpp synthetase compare
BWI76_RS15825 -3.1 -1.9 hypothetical protein compare
BWI76_RS07065 -3.1 -3.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00805 -3.0 -4.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05980 -2.9 -7.1 ABC transporter ATP-binding protein compare
BWI76_RS01350 -2.9 -1.3 NAD(P)H-flavin reductase compare
BWI76_RS20435 -2.9 -1.2 chorismate synthase compare
BWI76_RS21140 -2.8 -3.0 molecular chaperone HscA compare
BWI76_RS09970 -2.8 -4.7 porin OmpA compare
BWI76_RS06535 -2.8 -5.5 endopeptidase La compare
BWI76_RS23240 -2.8 -4.2 exonuclease V subunit gamma compare
BWI76_RS13820 -2.8 -2.8 hypothetical protein compare
BWI76_RS22765 -2.8 -6.2 sulfite reductase subunit alpha compare
BWI76_RS04665 -2.7 -13.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS05995 -2.7 -6.1 branched-chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS18630 -2.7 -6.1 nitrogen assimilation transcriptional regulator compare
BWI76_RS04680 -2.6 -7.9 2-isopropylmalate synthase compare
BWI76_RS00835 -2.6 -7.3 phosphoenolpyruvate carboxylase compare
BWI76_RS05450 -2.6 -1.9 ribonuclease HI compare
BWI76_RS05985 -2.6 -3.8 branched-chain amino acid ABC transporter permease compare
BWI76_RS24285 -2.5 -4.5 cystathionine beta-lyase compare
BWI76_RS00980 -2.5 -6.9 PLP-dependent threonine dehydratase compare
BWI76_RS17345 -2.5 -3.2 nitrate/nitrite two-component system sensor histidine kinase NarX compare
BWI76_RS08525 -2.4 -3.1 colicin transporter compare
BWI76_RS22760 -2.4 -7.5 sulfite reductase subunit beta compare
BWI76_RS26570 -2.4 -3.0 anion permease compare
BWI76_RS07475 -2.4 -1.3 DNA-binding transcriptional regulator RamA compare
BWI76_RS25335 -2.4 -2.9 stringent starvation protein A compare
BWI76_RS20900 -2.4 -1.8 outer membrane protein assembly factor BamC compare
BWI76_RS02580 -2.2 -1.6 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS04685 -2.2 -5.7 putative leucine operon leader peptide compare
BWI76_RS24900 -2.2 -2.0 DeoR family transcriptional regulator compare
BWI76_RS06525 -2.2 -3.7 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01655 -2.1 -6.6 homoserine O-succinyltransferase compare
BWI76_RS25960 -2.1 -5.5 NUDIX hydrolase compare
BWI76_RS21475 -2.1 -5.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS25645 -2.1 -5.0 shikimate dehydrogenase compare
BWI76_RS11300 -2.1 -1.3 cupin compare
BWI76_RS00785 -2.0 -3.6 cystathionine gamma-synthase compare
BWI76_RS14050 -2.0 -2.1 AP endonuclease, family 2 compare
BWI76_RS20640 -2.0 -4.7 cysteine synthase A compare
BWI76_RS23320 -1.9 -1.3 hypothetical protein compare
BWI76_RS15665 -1.9 -3.0 hypothetical protein compare
BWI76_RS16965 -1.9 -4.7 murein lipoprotein compare
BWI76_RS19845 -1.9 -3.5 phosphatase compare
BWI76_RS23480 -1.8 -5.8 EAL domain-containing protein compare
BWI76_RS17980 -1.8 -4.8 RNA chaperone ProQ compare
BWI76_RS26390 -1.8 -3.8 cell division protein FtsX compare
BWI76_RS25300 -1.8 -2.3 hybrid sensor histidine kinase/response regulator compare
BWI76_RS18580 -1.7 -1.9 hypothetical protein compare
BWI76_RS15835 -1.7 -1.0 hypothetical protein compare
BWI76_RS13480 -1.7 -1.6 XRE family transcriptional regulator compare
BWI76_RS22135 -1.7 -2.1 transport-associated protein compare
BWI76_RS06770 -1.7 -6.4 Hha toxicity attenuator compare
BWI76_RS12885 -1.7 -3.3 hypothetical protein compare
BWI76_RS06800 -1.7 -1.3 DUF2496 domain-containing protein compare
BWI76_RS25600 -1.7 -1.1 tRNA-Thr compare
BWI76_RS09960 -1.7 -2.3 Lon protease compare
BWI76_RS26395 -1.7 -5.1 cell division protein FtsE compare
BWI76_RS24500 -1.6 -2.5 urease subunit gamma compare
BWI76_RS17720 -1.6 -1.2 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS26055 -1.6 -4.7 siroheme synthase compare
BWI76_RS10040 -1.6 -1.9 heat-shock protein HspQ compare
BWI76_RS26455 -1.6 -3.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS01200 -1.6 -1.7 diaminopimelate epimerase compare
BWI76_RS06000 -1.6 -8.2 ethanolamine ammonia-lyase small subunit compare
BWI76_RS02410 -1.6 -1.6 EF-P beta-lysylation protein EpmB compare
BWI76_RS18715 -1.6 -4.6 hypothetical protein compare
BWI76_RS15050 -1.6 -3.7 sugar transporter compare
BWI76_RS21235 -1.6 -1.2 hypothetical protein compare
BWI76_RS20380 -1.5 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS05120 -1.5 -5.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS06005 -1.5 -5.0 ethanolamine ammonia lyase large subunit compare
BWI76_RS09690 -1.5 -1.4 dimethyl sulfoxide reductase compare
BWI76_RS21070 -1.5 -2.0 outer membrane protein assembly factor BamB compare
BWI76_RS17955 -1.5 -1.9 hypothetical protein compare
BWI76_RS21480 -1.4 -5.7 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS05975 -1.4 -2.1 ABC transporter ATP-binding protein compare
BWI76_RS09130 -1.4 -2.6 biofilm formation regulatory protein BssR compare
BWI76_RS03535 -1.4 -8.3 Tryptophanase (EC 4.1.99.1) (from data) compare
BWI76_RS09455 -1.4 -2.5 YbjN domain-containing protein compare
BWI76_RS27440 -1.4 -2.0 DNA helicase RecG compare
BWI76_RS25280 -1.4 -1.5 RNase adaptor protein RapZ compare
BWI76_RS15680 -1.4 -2.5 hypothetical protein compare
BWI76_RS01995 -1.4 -1.2 AraC family transcriptional regulator compare
BWI76_RS25505 -1.3 -4.0 RNase E specificity factor CsrD compare
BWI76_RS08245 -1.3 -2.6 MFS transporter compare
BWI76_RS13980 -1.3 -1.2 hypothetical protein compare
BWI76_RS21505 -1.3 -1.0 hypothetical protein compare
BWI76_RS18755 -1.3 -1.1 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS08925 -1.3 -2.2 DNA-binding protein YbiB compare
BWI76_RS25060 -1.3 -2.7 lipoprotein NlpI compare
BWI76_RS12495 -1.3 -1.5 2-Cys peroxiredoxin compare
BWI76_RS15810 -1.3 -2.8 hypothetical protein compare
BWI76_RS09255 -1.3 -1.5 hypothetical protein compare
BWI76_RS25205 -1.3 -2.0 hypothetical protein compare
BWI76_RS06010 -1.3 -4.4 ethanolamine permease compare
BWI76_RS26980 -1.3 -2.0 cold-shock protein compare
BWI76_RS17970 -1.3 -1.2 zinc metalloprotease HtpX compare
BWI76_RS14390 -1.2 -1.4 hypothetical protein compare
BWI76_RS09390 -1.2 -1.9 phage tail protein compare
BWI76_RS04955 -1.2 -1.0 hypoxanthine phosphoribosyltransferase compare
BWI76_RS01185 -1.2 -1.6 adenylate cyclase compare
BWI76_RS21980 -1.2 -1.4 hypothetical protein compare
BWI76_RS01800 -1.2 -1.9 glucose-6-phosphate isomerase compare
BWI76_RS24485 -1.2 -1.6 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS04270 -1.2 -2.5 transaldolase compare
BWI76_RS19325 -1.2 -1.3 mandelate racemase compare
BWI76_RS26460 -1.2 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS08380 -1.2 -0.9 endonuclease VIII compare
BWI76_RS21795 -1.2 -2.5 EAL domain-containing protein compare
BWI76_RS03665 -1.2 -1.0 ABC transporter ATP-binding protein compare
BWI76_RS08530 -1.2 -1.1 protein TolA compare
BWI76_RS14005 -1.2 -1.5 TetR family transcriptional regulator compare
BWI76_RS20205 -1.1 -2.9 aminotransferase AlaT compare
BWI76_RS16315 -1.1 -1.0 SirA-like protein compare
BWI76_RS03540 -1.1 -2.4 tryptophanase leader peptide compare
BWI76_RS06765 -1.1 -1.5 transcriptional regulator compare
BWI76_RS20430 -1.1 -1.2 penicillin-insensitive murein endopeptidase compare
BWI76_RS17735 -1.1 -2.2 D-amino acid dehydrogenase small subunit compare
BWI76_RS06325 -1.1 -2.0 hypothetical protein compare
BWI76_RS24845 -1.1 -2.9 PfkB domain-containing protein compare
BWI76_RS19695 -1.1 -1.6 membrane protein compare
BWI76_RS16500 -1.1 -1.7 superoxide dismutase [Fe] compare
BWI76_RS24330 -1.1 -1.2 TIGR00156 family protein compare
BWI76_RS09870 -1.1 -3.9 aromatic amino acid aminotransferase compare


Specific Phenotypes

For 10 genes in this experiment

For nitrogen source L-Tryptophan in Klebsiella michiganensis M5al

For nitrogen source L-Tryptophan across organisms