Experiment set6IT051 for Pseudomonas fluorescens FW300-N2E2

Compare to:

LB with Sodium tungstate dihydrate 0.05 M

200 most important genes:

  gene name fitness t score description  
Pf6N2E2_5704 -4.8 -7.3 Transcriptional regulatory protein PhoP compare
Pf6N2E2_773 -4.3 -6.6 Undecaprenyl-diphosphatase (EC 3.6.1.27) compare
Pf6N2E2_3617 -4.3 -5.1 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) compare
Pf6N2E2_1633 -4.3 -5.0 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) compare
Pf6N2E2_5006 -4.1 -9.3 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) compare
Pf6N2E2_1634 -4.1 -5.5 ABC-type Fe3+-siderophore transport system, permease component compare
Pf6N2E2_5014 -4.0 -1.8 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE compare
Pf6N2E2_3834 -3.9 -7.5 Lipoprotein NlpD compare
Pf6N2E2_1273 -3.9 -5.2 Probable RND efflux membrane fusion protein compare
Pf6N2E2_5346 -3.8 -3.6 rRNA small subunit methyltransferase I compare
Pf6N2E2_3134 -3.6 -1.6 hypothetical protein compare
Pf6N2E2_1625 -3.6 -4.2 Ferric reductase (1.6.99.14) compare
Pf6N2E2_4046 -3.6 -19.1 FIG00953482: hypothetical protein compare
Pf6N2E2_5150 -3.6 -6.3 Glucose-6-phosphate isomerase (EC 5.3.1.9) compare
Pf6N2E2_3243 -3.6 -16.2 FIG067310: hypothetical protein compare
Pf6N2E2_1272 -3.5 -11.7 Acriflavin resistance plasma membrane protein conserved
Pf6N2E2_1636 -3.4 -8.2 Ferrichrome-iron receptor compare
Pf6N2E2_1270 -3.4 -9.4 Heavy metal RND efflux outer membrane protein, CzcC family compare
Pf6N2E2_3941 -3.4 -4.0 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) compare
Pf6N2E2_1271 -3.4 -11.9 Acriflavin resistance plasma membrane protein compare
Pf6N2E2_5705 -3.3 -3.2 Sensor protein PhoQ (EC 2.7.13.3) compare
Pf6N2E2_1087 -3.3 -8.9 Iron siderophore sensor protein compare
Pf6N2E2_3301 -3.3 -12.7 ABC transporter, ATP-binding protein compare
Pf6N2E2_1635 -3.2 -5.3 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components compare
Pf6N2E2_3791 -3.2 -10.6 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) compare
Pf6N2E2_2574 -3.2 -2.2 Flagellar synthesis regulator FleN compare
Pf6N2E2_4585 -3.2 -13.8 Cell division protein FtsX compare
Pf6N2E2_3833 -3.2 -5.9 hypothetical protein compare
Pf6N2E2_2825 -3.1 -3.7 RND efflux system, outer membrane lipoprotein CmeC compare
Pf6N2E2_2278 -3.1 -16.2 Transcription-repair coupling factor compare
Pf6N2E2_2824 -3.0 -10.8 RND efflux system, inner membrane transporter CmeB compare
Pf6N2E2_4045 -3.0 -4.3 FIG00953248: hypothetical protein compare
Pf6N2E2_5771 -3.0 -9.0 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) compare
Pf6N2E2_5069 -2.9 -5.7 putative Cytochrome bd2, subunit II compare
Pf6N2E2_2646 -2.9 -2.8 FIG00953416: hypothetical protein compare
Pf6N2E2_4584 -2.8 -3.6 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) compare
Pf6N2E2_2753 -2.8 -2.7 HtrA protease/chaperone protein compare
Pf6N2E2_5068 -2.8 -11.5 putative Cytochrome bd2, subunit I compare
Pf6N2E2_2340 -2.8 -5.8 Transcriptional regulator, GntR family compare
Pf6N2E2_445 -2.7 -6.0 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) compare
Pf6N2E2_5316 -2.7 -2.6 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation compare
Pf6N2E2_3792 -2.7 -7.0 Glucans biosynthesis protein G precursor compare
Pf6N2E2_5619 -2.7 -5.2 Putative two-component system sensor kinase compare
Pf6N2E2_1626 -2.6 -5.0 Putative ATP-binding component of a transport system compare
Pf6N2E2_1632 -2.6 -4.5 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) compare
Pf6N2E2_2823 -2.6 -5.8 Multidrug efflux RND membrane fusion protein MexC compare
Pf6N2E2_3285 -2.5 -3.8 Rod shape-determining protein MreD compare
Pf6N2E2_2754 -2.5 -2.7 Sigma factor RpoE negative regulatory protein RseB precursor compare
Pf6N2E2_4556 -2.5 -4.0 FIG00953078: hypothetical protein compare
Pf6N2E2_3282 -2.5 -1.7 FIG005080: Possible exported protein compare
Pf6N2E2_4204 -2.4 -2.2 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB compare
Pf6N2E2_2010 -2.4 -2.3 hypothetical protein compare
Pf6N2E2_144 -2.3 -13.5 Uncharacterized protein YtfM precursor compare
Pf6N2E2_4187 -2.3 -4.9 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) compare
Pf6N2E2_504 -2.3 -3.0 DNA-binding response regulator compare
Pf6N2E2_1116 -2.3 -1.9 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) compare
Pf6N2E2_3303 -2.3 -5.3 Sensor histidine kinase PrrB (RegB) (EC 2.7.3.-) compare
Pf6N2E2_3661 -2.3 -4.3 hypothetical protein compare
Pf6N2E2_3271 -2.2 -2.8 Phosphocarrier protein, nitrogen regulation associated compare
Pf6N2E2_4153 -2.2 -1.5 Sensory box histidine kinase compare
Pf6N2E2_5621 -2.2 -4.0 DNA-binding response regulator compare
Pf6N2E2_2507 -2.2 -5.6 Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-) compare
Pf6N2E2_5677 -2.1 -1.6 Carbon storage regulator compare
Pf6N2E2_3252 -2.1 -6.2 Histidinol dehydrogenase (EC 1.1.1.23) compare
Pf6N2E2_1056 -2.1 -1.2 Quinone oxidoreductase (EC 1.6.5.5) compare
Pf6N2E2_3060 -2.1 -3.4 Outer membrane protein H precursor compare
Pf6N2E2_5097 -2.1 -4.6 FIG00953595: hypothetical protein compare
Pf6N2E2_2755 -2.1 -1.6 Sigma factor RpoE negative regulatory protein RseA compare
Pf6N2E2_3251 -2.0 -8.3 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Pf6N2E2_3658 -2.0 -6.6 Lipid A core - O-antigen ligase and related enzymes compare
Pf6N2E2_4044 -1.9 -3.5 Holliday junction resolvasome, helicase subunit compare
Pf6N2E2_292 -1.9 -7.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Pf6N2E2_5001 -1.9 -2.2 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) compare
Pf6N2E2_5342 -1.9 -3.0 21 kDa hemolysin precursor compare
Pf6N2E2_3257 -1.9 -2.8 Uncharacterized ABC transporter, auxiliary component YrbC compare
Pf6N2E2_3782 -1.9 -2.7 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) compare
Pf6N2E2_2320 -1.8 -3.2 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein compare
Pf6N2E2_756 -1.8 -4.0 hypothetical protein compare
Pf6N2E2_5339 -1.8 -5.4 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit compare
Pf6N2E2_2261 -1.8 -5.4 VacJ-like lipoprotein precursor compare
Pf6N2E2_2508 -1.7 -3.5 hypothetical protein compare
Pf6N2E2_145 -1.7 -5.4 putative exported protein compare
Pf6N2E2_3942 -1.7 -7.6 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated compare
Pf6N2E2_3829 -1.7 -4.6 Protein export cytoplasm chaperone protein (SecB, maintains protein to be exported in unfolded state) compare
Pf6N2E2_451 -1.7 -2.7 transcriptional regulator MvaT, P16 subunit, putative compare
Pf6N2E2_3665 -1.6 -1.0 serine/threonine protein kinase compare
Pf6N2E2_5337 -1.6 -4.0 Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2) compare
Pf6N2E2_5956 -1.6 -5.1 FIG004453: protein YceG like compare
Pf6N2E2_3253 -1.6 -5.0 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Pf6N2E2_3659 -1.6 -4.6 Protein fixF compare
Pf6N2E2_5103 -1.6 -1.7 Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA compare
Pf6N2E2_1385 -1.6 -2.6 FIG00956261: hypothetical protein compare
Pf6N2E2_2045 -1.5 -2.9 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) compare
Pf6N2E2_4451 -1.5 -5.3 FIG139438: lipoprotein B compare
Pf6N2E2_4453 -1.5 -10.9 Polyphosphate kinase (EC 2.7.4.1) compare
Pf6N2E2_5425 -1.5 -1.6 hypothetical protein compare
Pf6N2E2_1248 -1.5 -2.2 MutT/nudix family protein compare
Pf6N2E2_5155 -1.5 -2.7 Poly(A) polymerase (EC 2.7.7.19) compare
Pf6N2E2_2506 -1.4 -8.9 nucleotide sugar epimerase/dehydratase WbpM compare
Pf6N2E2_4992 -1.4 -9.4 DNA-3-methyladenine glycosylase II (EC 3.2.2.21) compare
Pf6N2E2_3461 -1.4 -1.6 Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) compare
Pf6N2E2_156 -1.4 -1.9 Carbon storage regulator compare
Pf6N2E2_2317 -1.4 -3.5 Putative analog of CcoH, COG3198 compare
Pf6N2E2_3839 -1.4 -3.4 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Pf6N2E2_3842 -1.4 -2.7 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) compare
Pf6N2E2_3521 -1.4 -5.8 Sensor histidine kinase/response regulator compare
Pf6N2E2_3635 -1.4 -3.2 FIG00953138: hypothetical protein compare
Pf6N2E2_819 -1.3 -2.2 Response regulator compare
Pf6N2E2_5245 -1.3 -4.1 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf6N2E2_2318 -1.3 -4.9 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) compare
Pf6N2E2_2312 -1.3 -2.4 Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) compare
Pf6N2E2_5338 -1.3 -5.4 Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2) compare
Pf6N2E2_3260 -1.3 -3.7 Uncharacterized ABC transporter, ATP-binding protein YrbF compare
Pf6N2E2_1860 -1.3 -2.7 Ferredoxin, 2Fe-2S compare
Pf6N2E2_3258 -1.3 -3.3 Uncharacterized ABC transporter, periplasmic component YrbD compare
Pf6N2E2_4611 -1.3 -3.2 Ferric siderophore transport system, periplasmic binding protein TonB compare
Pf6N2E2_5723 -1.3 -6.8 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) compare
Pf6N2E2_5128 -1.3 -1.6 COG1496: Uncharacterized conserved protein compare
Pf6N2E2_5944 -1.3 -3.7 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) compare
Pf6N2E2_2311 -1.3 -5.3 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) compare
Pf6N2E2_4991 -1.3 -4.3 DedA protein compare
Pf6N2E2_3021 -1.3 -1.1 hypothetical protein compare
Pf6N2E2_2938 -1.2 -3.4 Outer membrane lipoprotein compare
Pf6N2E2_4710 -1.2 -2.0 hypothetical protein compare
Pf6N2E2_1298 -1.2 -2.5 Xanthine transporter,putative compare
Pf6N2E2_5884 -1.2 -5.5 Sensor histidine kinase compare
Pf6N2E2_1984 -1.2 -2.2 probable exported protein STY4558 compare
Pf6N2E2_2127 -1.2 -3.2 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) compare
Pf6N2E2_4418 -1.2 -0.9 Diaminopimelate epimerase (EC 5.1.1.7) compare
Pf6N2E2_75 -1.2 -2.7 Colicin V production protein compare
Pf6N2E2_2201 -1.2 -3.0 Transmembrane regulator protein PrtR compare
Pf6N2E2_1673 -1.2 -1.9 Transcriptional regulator, TetR family compare
Pf6N2E2_1501 -1.2 -2.1 Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17) compare
Pf6N2E2_4751 -1.2 -2.6 response regulator compare
Pf6N2E2_3656 -1.1 -4.4 Probable transcription regulator Mig-14 compare
Pf6N2E2_2384 -1.1 -3.2 CmpX compare
Pf6N2E2_291 -1.1 -3.2 ATP-dependent Clp protease adaptor protein ClpS compare
Pf6N2E2_5508 -1.1 -1.3 Formyltetrahydrofolate deformylase (EC 3.5.1.10) compare
Pf6N2E2_5622 -1.1 -1.9 Translation initiation factor 2 (IF-2; GTPase) compare
Pf6N2E2_2124 -1.1 -1.0 Mg(2+) transport ATPase protein C compare
Pf6N2E2_4433 -1.1 -4.9 Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) compare
Pf6N2E2_2111 -1.1 -2.4 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) compare
Pf6N2E2_464 -1.1 -2.1 Sensory histidine kinase QseC compare
Pf6N2E2_1488 -1.1 -3.6 hypothetical protein compare
Pf6N2E2_5821 -1.1 -5.4 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase compare
Pf6N2E2_3397 -1.1 -1.9 Phage protein compare
Pf6N2E2_5453 -1.1 -3.4 hypothetical protein compare
Pf6N2E2_5172 -1.0 -1.7 FOG: TPR repeat compare
Pf6N2E2_4969 -1.0 -1.0 hypothetical protein compare
Pf6N2E2_5733 -1.0 -3.7 NLP/P60 family protein compare
Pf6N2E2_3664 -1.0 -5.2 Carbamoyltransferase in large core OS assembly cluster compare
Pf6N2E2_6047 -1.0 -1.6 hypothetical protein compare
Pf6N2E2_2310 -1.0 -5.6 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) compare
Pf6N2E2_2509 -1.0 -1.3 UDP-glucose 4-epimerase (EC 5.1.3.2) compare
Pf6N2E2_4996 -1.0 -1.5 LSU m3Psi1915 methyltransferase RlmH compare
Pf6N2E2_3655 -1.0 -6.6 Hypothetical protein FIG015671 in large core OS assembly cluster compare
Pf6N2E2_5073 -1.0 -2.3 Large-conductance mechanosensitive channel compare
Pf6N2E2_3611 -1.0 -0.8 HflC protein compare
Pf6N2E2_2253 -1.0 -2.6 hypothetical protein compare
Pf6N2E2_434 -1.0 -1.4 hypothetical protein compare
Pf6N2E2_4352 -1.0 -2.0 ATP-dependent DNA helicase RecG (EC 3.6.1.-) compare
Pf6N2E2_4432 -1.0 -4.0 Uroporphyrinogen-III synthase (EC 4.2.1.75) compare
Pf6N2E2_92 -1.0 -2.6 hypothetical protein compare
Pf6N2E2_3835 -1.0 -2.3 Carboxyl-terminal protease (EC 3.4.21.102) compare
Pf6N2E2_919 -1.0 -1.5 FIG00954373: hypothetical protein compare
Pf6N2E2_5271 -1.0 -2.9 FIG00953380: hypothetical protein compare
Pf6N2E2_2296 -0.9 -1.7 FIG00954767: hypothetical protein compare
Pf6N2E2_3696 -0.9 -1.0 hypothetical protein compare
Pf6N2E2_2794 -0.9 -1.2 putative membrane protein compare
Pf6N2E2_5725 -0.9 -3.7 nucleoprotein/polynucleotide-associated enzyme compare
Pf6N2E2_2594 -0.9 -4.1 Flagellar hook-basal body complex protein FliE compare
Pf6N2E2_5435 -0.9 -2.7 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf6N2E2_2274 -0.9 -2.8 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) compare
Pf6N2E2_4580 -0.9 -4.5 FIG015287: Zinc protease compare
Pf6N2E2_812 -0.9 -3.1 Glycosyltransferase compare
Pf6N2E2_2510 -0.9 -2.4 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) / Alpha-1,3-N-acetylgalactosamine transferase PglA (EC 2.4.1.-); Putative glycosyltransferase compare
Pf6N2E2_5178 -0.9 -1.6 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) compare
Pf6N2E2_2546 -0.9 -2.4 Carbon storage regulator compare
Pf6N2E2_3666 -0.9 -1.8 InaA protein compare
Pf6N2E2_5242 -0.9 -1.6 Malate:quinone oxidoreductase (EC 1.1.5.4) compare
Pf6N2E2_6164 -0.9 -0.9 tRNA-Val-TAC compare
Pf6N2E2_1617 -0.9 -0.9 COG2199: FOG: GGDEF domain compare
Pf6N2E2_2586 -0.9 -1.4 Hpt domain protein compare
Pf6N2E2_3841 -0.9 -3.2 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) compare
Pf6N2E2_3663 -0.9 -3.9 Glycosyl transferase compare
Pf6N2E2_4661 -0.9 -2.5 KluA regulatory protein compare
Pf6N2E2_1085 -0.9 -1.2 Fe2+/Zn2+ uptake regulation proteins compare
Pf6N2E2_4562 -0.9 -2.3 L-cystine uptake protein TcyP compare
Pf6N2E2_1598 -0.9 -1.3 Nitrate reductase cytochrome c550-type subunit compare
Pf6N2E2_138 -0.9 -1.9 Alpha/beta hydrolase fold (EC 3.8.1.5) compare
Pf6N2E2_1211 -0.8 -1.3 Lactoylglutathione lyase compare
Pf6N2E2_1124 -0.8 -1.6 Ferric siderophore transport system, periplasmic binding protein TonB compare
Pf6N2E2_395 -0.8 -2.3 Glutathione S-transferase (EC 2.5.1.18) compare
Pf6N2E2_958 -0.8 -0.9 hypothetical protein compare
Pf6N2E2_4120 -0.8 -5.1 Trk system potassium uptake protein TrkA compare
Pf6N2E2_4506 -0.8 -2.3 Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB compare
Pf6N2E2_1834 -0.8 -1.2 Enoyl-CoA hydratase (EC 4.2.1.17) compare
Pf6N2E2_1193 -0.8 -2.3 Outer membrane porin, OprD family compare
Pf6N2E2_572 -0.8 -1.5 hypothetical protein compare
Pf6N2E2_4159 -0.8 -1.3 Cytochrome c4 compare


Specific Phenotypes

For 22 genes in this experiment

For stress Sodium tungstate dihydrate in Pseudomonas fluorescens FW300-N2E2

For stress Sodium tungstate dihydrate across organisms