Experiment set6IT051 for Pseudomonas fluorescens FW300-N2E2
LB with Sodium tungstate dihydrate 0.05 M
Group: stressMedia: LB + Sodium tungstate dihydrate (0.05 M), pH=7
Culturing: pseudo6_N2E2_ML5, 24 deep-well microplate; Multitron, Aerobic, at 30 (C), shaken=500 rpm
By: Hans_Hualan on 2/2/2016
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 22 genes in this experiment
For stress Sodium tungstate dihydrate in Pseudomonas fluorescens FW300-N2E2
For stress Sodium tungstate dihydrate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Fatty acid biosynthesis
- Caffeine metabolism
- Tyrosine metabolism
- Phenylalanine metabolism
- Phenylalanine, tyrosine and tryptophan biosynthesis
- Nitrogen metabolism
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-phenylalanine degradation I (aerobic) | 1 | 1 | 1 |
| L-tyrosine biosynthesis IV | 1 | 1 | 1 |
| ferrichrome biosynthesis | 2 | 1 | 1 |
| fatty acid biosynthesis initiation (type II) | 3 | 3 | 1 |
| L-phenylalanine degradation V | 3 | 2 | 1 |
| fatty acid biosynthesis initiation (mitochondria) | 4 | 2 | 1 |
| fatty acid biosynthesis initiation (plant mitochondria) | 4 | 1 | 1 |
| superpathway of fatty acid biosynthesis initiation | 5 | 4 | 1 |
| ferrichrome A biosynthesis | 5 | 3 | 1 |
| mycobactin biosynthesis | 11 | 2 | 2 |
| pederin biosynthesis | 14 | 2 | 2 |
| bryostatin biosynthesis | 19 | 2 | 2 |
| pyoverdine I biosynthesis | 11 | 7 | 1 |
| superpathway of fatty acid biosynthesis I (E. coli) | 16 | 15 | 1 |
| mupirocin biosynthesis | 26 | 2 | 1 |
| corallopyronin A biosynthesis | 30 | 2 | 1 |
| superpathway of fatty acid biosynthesis II (plant) | 43 | 38 | 1 |
| superpathway of fatty acids biosynthesis (E. coli) | 53 | 49 | 1 |