Experiment set6IT051 for Pseudomonas fluorescens FW300-N2C3

Compare to:

Adenine hydrochloride hydrate nitrogen source

200 most important genes:

  gene name fitness t score description  
AO356_14440 -6.3 -4.4 indole-3-glycerol-phosphate synthase compare
AO356_21440 -6.0 -8.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_09520 -5.9 -4.1 phosphoribosyl-AMP cyclohydrolase compare
AO356_09815 -5.7 -6.8 imidazoleglycerol-phosphate dehydratase compare
AO356_09810 -5.7 -4.0 imidazole glycerol phosphate synthase subunit HisH compare
AO356_09525 -5.4 -6.4 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_13405 -5.3 -11.3 methionine biosynthesis protein MetW compare
AO356_21405 -5.3 -6.3 3-isopropylmalate dehydratase compare
AO356_08635 -5.2 -11.2 ATP phosphoribosyltransferase regulatory subunit compare
AO356_13410 -5.2 -13.1 homoserine O-acetyltransferase compare
AO356_12525 -5.1 -10.9 acetylglutamate kinase compare
AO356_12520 -5.1 -3.5 orotate phosphoribosyltransferase compare
AO356_14420 -5.1 -16.3 anthranilate synthase compare
AO356_16175 -5.1 -9.1 acetolactate synthase 3 regulatory subunit compare
AO356_13605 -5.0 -6.9 5,10-methylenetetrahydrofolate reductase compare
AO356_09730 -5.0 -7.6 nitrogen regulation protein NR(I) compare
AO356_06965 -5.0 -10.0 histidinol dehydrogenase compare
AO356_18325 -4.9 -14.8 argininosuccinate synthase compare
AO356_09800 -4.7 -5.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_10915 -4.7 -11.1 tryptophan synthase subunit beta compare
AO356_09375 -4.7 -23.0 glutamate synthase compare
AO356_13085 -4.6 -12.8 N-acetylglutamate synthase compare
AO356_18275 -4.5 -15.2 ornithine carbamoyltransferase compare
AO356_21415 -4.5 -9.3 3-isopropylmalate dehydrogenase compare
AO356_14435 -4.5 -8.1 anthranilate phosphoribosyltransferase compare
AO356_06970 -4.5 -7.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_10910 -4.5 -10.6 tryptophan synthase subunit alpha compare
AO356_16180 -4.5 -16.6 ketol-acid reductoisomerase compare
AO356_16170 -4.4 -14.4 acetolactate synthase 3 catalytic subunit compare
AO356_14430 -4.4 -7.1 anthranilate synthase compare
AO356_03355 -4.4 -6.6 hypothetical protein compare
AO356_19795 -4.4 -4.2 glycerol-3-phosphate dehydrogenase compare
AO356_09370 -4.3 -12.2 glutamate synthase compare
AO356_13250 -4.3 -12.1 dihydroxy-acid dehydratase compare
AO356_21400 -4.0 -5.5 isopropylmalate isomerase compare
AO356_08735 -3.9 -13.3 phosphoserine phosphatase compare
AO356_21470 -3.9 -7.6 O-succinylhomoserine sulfhydrylase compare
AO356_09725 -3.9 -7.7 histidine kinase compare
AO356_10340 -3.8 -13.8 phosphoserine phosphatase compare
AO356_16075 -3.7 -6.2 Fis family transcriptional regulator compare
AO356_16050 -3.7 -3.6 glucose-6-phosphate isomerase compare
AO356_06550 -3.7 -9.1 2-isopropylmalate synthase compare
AO356_12780 -3.7 -9.7 argininosuccinate lyase compare
AO356_15165 -3.5 -4.1 protein cII compare
AO356_10300 -3.4 -4.3 3-phosphoglycerate dehydrogenase compare
AO356_09795 -3.4 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
AO356_19465 -3.4 -5.8 5-hydroxyisourate hydrolase [EC: 3.5.2.17] (from data) conserved
AO356_00555 -3.4 -13.0 sulfite reductase compare
AO356_07910 -3.4 -2.3 exodeoxyribonuclease V subunit alpha compare
AO356_00560 -3.3 -3.8 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_10000 -3.3 -6.7 hypothetical protein compare
AO356_05160 -3.2 -8.6 glucose-6-phosphate dehydrogenase compare
AO356_22200 -3.2 -10.4 sirohydrochlorin ferrochelatase compare
AO356_08870 -3.1 -11.0 polymerase compare
AO356_11315 -3.1 -2.1 shikimate dehydrogenase compare
AO356_06960 -3.0 -8.1 histidinol-phosphate aminotransferase compare
AO356_03345 -3.0 -12.9 hypothetical protein compare
AO356_03365 -3.0 -5.8 UDP-N-acetylglucosamine 2-epimerase compare
AO356_02175 -3.0 -8.2 transaldolase compare
AO356_07005 -3.0 -2.9 ABC transporter ATP-binding protein compare
AO356_06050 -3.0 -15.3 protein-PII uridylyltransferase compare
AO356_03350 -2.9 -9.0 glycosyl transferase compare
AO356_18025 -2.9 -3.8 ATP-dependent DNA helicase RuvB compare
AO356_07915 -2.8 -4.2 exodeoxyribonuclease V subunit beta compare
AO356_10005 -2.8 -9.9 branched-chain amino acid permease (azaleucine resistance) compare
AO356_08385 -2.8 -4.2 urease subunit beta compare
AO356_03420 -2.7 -10.8 UDP-N-acetyl-D-glucosamine dehydrogenase compare
AO356_09995 -2.7 -9.3 LysR family transcriptional regulator compare
AO356_03360 -2.7 -4.7 hypothetical protein compare
AO356_03415 -2.7 -11.4 oxidoreductase compare
AO356_15815 -2.6 -3.1 gamma-glutamyl kinase compare
AO356_08465 -2.6 -3.8 protein hupE compare
AO356_03400 -2.6 -8.5 aminotransferase DegT compare
AO356_20155 -2.5 -7.1 phosphate acyltransferase compare
AO356_00355 -2.5 -9.3 chemotaxis protein CheY compare
AO356_12020 -2.5 -13.5 pyruvate carboxylase subunit A compare
AO356_12025 -2.4 -12.9 pyruvate carboxylase subunit B compare
AO356_18020 -2.3 -4.9 ATP-dependent DNA helicase RuvA compare
AO356_19455 -2.3 -5.3 OHCU decarboxylase conserved
AO356_21330 -2.2 -9.3 aromatic amino acid aminotransferase compare
AO356_03405 -2.2 -5.0 serine acetyltransferase compare
AO356_19045 -2.2 -11.9 chemotaxis protein CheY compare
AO356_08025 -2.2 -10.2 adenosine deaminase conserved
AO356_03380 -2.2 -6.8 glycosyl amidation-associated protein WbuZ compare
AO356_18730 -2.1 -9.4 arginine N-succinyltransferase compare
AO356_20830 -2.0 -4.4 phosphoadenosine phosphosulfate reductase compare
AO356_19460 -2.0 -8.2 allantoinase (EC 3.5.2.5) (from data) conserved
AO356_07540 -2.0 -2.6 SsrA-binding protein compare
AO356_05670 -2.0 -4.1 recombinase RecA compare
AO356_17520 -1.9 -2.9 phosphoribosylformylglycinamidine synthase compare
AO356_07480 -1.9 -2.9 carbamoyl phosphate synthase large subunit compare
AO356_08365 -1.8 -5.1 Urease maturation and nickel insertion protein UreD (from data) conserved
AO356_14540 -1.8 -2.1 biotin--protein ligase compare
AO356_08370 -1.8 -2.6 urease subunit gamma compare
AO356_12015 -1.8 -8.6 LysR family transcriptional regulator compare
AO356_21465 -1.8 -6.0 amidophosphoribosyltransferase compare
AO356_08390 -1.8 -10.3 Urease (EC 3.5.1.5) (from data) conserved
AO356_10585 -1.8 -10.1 hypothetical protein compare
AO356_03375 -1.8 -3.0 ExsB family protein compare
AO356_08905 -1.7 -2.1 glycosyl transferase compare
AO356_19450 -1.7 -5.4 allantoicase compare
AO356_08455 -1.7 -3.6 urease accessory protein UreF compare
AO356_17985 -1.7 -6.1 cold-shock protein compare
AO356_18805 -1.6 -2.4 magnesium transporter compare
AO356_01745 -1.6 -5.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_10330 -1.6 -11.3 threonine dehydratase compare
AO356_00545 -1.6 -8.4 methionine synthase compare
AO356_20175 -1.6 -2.8 3-oxoacyl-ACP synthase compare
AO356_29855 -1.5 -2.0 hypothetical protein compare
AO356_17950 -1.5 -8.6 histidine kinase compare
AO356_12380 -1.5 -7.0 ATP-dependent DNA helicase RecG compare
AO356_07845 -1.5 -9.0 MFS transporter compare
AO356_11990 -1.4 -10.0 DNA helicase II compare
AO356_06385 -1.4 -3.7 recombinase XerD compare
AO356_08450 -1.4 -5.2 urease accessory protein UreE conserved
AO356_11465 -1.4 -6.9 DNA polymerase I compare
AO356_11585 -1.4 -4.5 lipid A biosynthesis lauroyl acyltransferase compare
AO356_08235 -1.4 -7.4 histidine kinase compare
AO356_22795 -1.4 -2.8 UTP--glucose-1-phosphate uridylyltransferase compare
AO356_10015 -1.4 -8.9 protein BsmA compare
AO356_13445 -1.4 -1.6 dihydroorotase compare
AO356_19090 -1.4 -3.1 phosphoribosylaminoimidazole synthetase compare
AO356_08875 -1.4 -2.9 toluene tolerance protein compare
AO356_03385 -1.4 -4.0 imidazole glycerol phosphate synthase subunit HisH compare
AO356_07850 -1.3 -9.8 hypothetical protein compare
AO356_14135 -1.3 -9.2 biotin synthase compare
AO356_01740 -1.3 -3.1 DNA-binding protein compare
AO356_08645 -1.3 -5.1 hypothetical protein compare
AO356_08610 -1.3 -5.3 exoribonuclease R compare
AO356_21410 -1.3 -3.0 SAM-dependent methyltransferase compare
AO356_27180 -1.3 -3.6 hypothetical protein compare
AO356_11025 -1.3 -4.4 transcriptional regulator PhoU compare
AO356_12725 -1.2 -2.8 recombinase XerC compare
AO356_08460 -1.2 -6.2 urease accessory protein UreG conserved
AO356_01245 -1.2 -6.6 glycogen branching protein compare
AO356_08585 -1.2 -3.0 50S ribosomal protein L9 compare
AO356_01750 -1.2 -3.4 ATP-dependent Clp protease proteolytic subunit compare
AO356_16070 -1.1 -4.3 poly(A) polymerase compare
AO356_08660 -1.1 -6.0 tRNA dimethylallyltransferase compare
AO356_06575 -1.1 -2.3 outer membrane protein assembly factor BamB compare
AO356_03070 -1.1 -7.5 histidine kinase compare
AO356_16690 -1.1 -4.7 peptidylprolyl isomerase compare
AO356_12900 -1.1 -3.3 exopolyphosphatase compare
AO356_17335 -1.1 -4.2 molybdenum cofactor biosynthesis protein MoaC compare
AO356_19050 -1.1 -2.9 cysteine synthase compare
AO356_03810 -1.1 -2.8 anti-anti-sigma factor compare
AO356_20215 -1.1 -5.2 radical SAM protein compare
AO356_05055 -1.1 -4.0 permease DsdX compare
AO356_00605 -1.0 -3.6 TetR family transcriptional regulator compare
AO356_02315 -1.0 -3.4 DNA topoisomerase I compare
AO356_01555 -1.0 -5.5 acyl-CoA dehydrogenase compare
AO356_07920 -1.0 -3.1 exodeoxyribonuclease V subunit gamma compare
AO356_11675 -1.0 -5.2 chromosome partitioning protein compare
AO356_24335 -1.0 -1.7 type VI secretion protein compare
AO356_26475 -1.0 -2.6 lactoylglutathione lyase compare
AO356_18775 -1.0 -2.7 aspartate kinase compare
AO356_08640 -1.0 -3.6 membrane protease HflC compare
AO356_17830 -1.0 -3.8 pyruvate kinase compare
AO356_11845 -1.0 -7.6 glycosyltransferase compare
AO356_12730 -1.0 -1.8 hypothetical protein compare
AO356_30345 -1.0 -4.3 IclR family transcriptional regulator compare
AO356_25225 -1.0 -1.5 peptidylprolyl isomerase compare
AO356_06990 -1.0 -3.7 toluene tolerance protein compare
AO356_06690 -1.0 -2.4 queuine tRNA-ribosyltransferase compare
AO356_11820 -1.0 -6.0 sugar ABC transporter ATP-binding protein compare
AO356_02560 -1.0 -4.5 Xanthine dehydrogenase (EC 1.17.1.4) (from data) compare
AO356_03180 -0.9 -3.8 CysB family transcriptional regulator compare
AO356_03800 -0.9 -1.6 histidine kinase compare
AO356_11825 -0.9 -4.3 ABC transporter compare
AO356_04550 -0.9 -2.7 response regulator SirA compare
AO356_13685 -0.9 -3.0 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_03435 -0.9 -2.9 integration host factor subunit beta compare
AO356_01990 -0.9 -3.4 phage tail protein compare
AO356_12005 -0.9 -6.7 transcriptional regulator compare
AO356_16485 -0.9 -5.1 hypothetical protein compare
AO356_07000 -0.9 -2.3 ABC transporter permease compare
AO356_11850 -0.9 -6.9 glycosyltransferase compare
AO356_16505 -0.9 -1.8 molybdopterin-synthase adenylyltransferase compare
AO356_02190 -0.9 -4.4 hypothetical protein compare
AO356_02570 -0.9 -4.4 molybdenum cofactor sulfurylase compare
AO356_03130 -0.9 -4.0 hypothetical protein compare
AO356_14020 -0.9 -2.1 hypothetical protein compare
AO356_07385 -0.8 -1.2 tRNA-Thr compare
AO356_20785 -0.8 -1.1 hypothetical protein compare
AO356_00880 -0.8 -1.6 integration host factor subunit alpha compare
AO356_19835 -0.8 -1.8 histidine kinase compare
AO356_03135 -0.8 -4.5 LysR family transcriptional regulator compare
AO356_03095 -0.8 -4.0 protease HtpX compare
AO356_10695 -0.8 -5.0 diguanylate cyclase compare
AO356_21125 -0.8 -2.5 cyclic peptide transporter compare
AO356_12485 -0.8 -2.9 DNA-directed RNA polymerase subunit omega compare
AO356_02565 -0.8 -6.9 Xanthine dehydrogenase (EC 1.17.1.4) (from data) compare
AO356_09015 -0.8 -6.2 transcriptional regulator compare
AO356_14295 -0.8 -0.9 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO356_14050 -0.8 -1.3 glutathione S-transferase compare
AO356_01970 -0.8 -4.4 phage capsid protein compare
AO356_13700 -0.8 -2.7 hypothetical protein compare
AO356_02310 -0.8 -2.8 PasA protein compare
AO356_12990 -0.7 -3.5 5-formyltetrahydrofolate cyclo-ligase compare
AO356_17890 -0.7 -1.7 H-NS histone compare


Specific Phenotypes

For 13 genes in this experiment

For nitrogen source Adenine hydrochloride hydrate in Pseudomonas fluorescens FW300-N2C3

For nitrogen source Adenine hydrochloride hydrate across organisms