Experiment set6IT050 for Pseudomonas fluorescens FW300-N2C3

Compare to:

Adenosine nitrogen source

200 most important genes:

  gene name fitness t score description  
AO356_21405 -6.9 -4.8 3-isopropylmalate dehydratase compare
AO356_21440 -6.6 -4.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
AO356_14440 -6.2 -4.3 indole-3-glycerol-phosphate synthase compare
AO356_13410 -5.9 -9.9 homoserine O-acetyltransferase compare
AO356_18325 -5.9 -9.9 argininosuccinate synthase compare
AO356_08635 -5.9 -9.0 ATP phosphoribosyltransferase regulatory subunit compare
AO356_09520 -5.9 -4.1 phosphoribosyl-AMP cyclohydrolase compare
AO356_13085 -5.7 -9.5 N-acetylglutamate synthase compare
AO356_09525 -5.7 -5.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
AO356_13405 -5.6 -10.8 methionine biosynthesis protein MetW compare
AO356_09815 -5.5 -7.5 imidazoleglycerol-phosphate dehydratase compare
AO356_12525 -5.4 -9.1 acetylglutamate kinase compare
AO356_09810 -5.2 -6.2 imidazole glycerol phosphate synthase subunit HisH compare
AO356_06965 -5.2 -8.0 histidinol dehydrogenase compare
AO356_09800 -5.1 -4.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
AO356_12990 -5.0 -6.9 5-formyltetrahydrofolate cyclo-ligase compare
AO356_13605 -5.0 -5.9 5,10-methylenetetrahydrofolate reductase compare
AO356_09375 -5.0 -25.4 glutamate synthase compare
AO356_21415 -4.9 -10.7 3-isopropylmalate dehydrogenase compare
AO356_21470 -4.9 -9.6 O-succinylhomoserine sulfhydrylase compare
AO356_10910 -4.8 -9.3 tryptophan synthase subunit alpha compare
AO356_14420 -4.8 -16.8 anthranilate synthase compare
AO356_10915 -4.7 -10.8 tryptophan synthase subunit beta compare
AO356_06970 -4.7 -6.7 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
AO356_13250 -4.6 -12.1 dihydroxy-acid dehydratase compare
AO356_16180 -4.5 -17.1 ketol-acid reductoisomerase compare
AO356_14435 -4.5 -8.1 anthranilate phosphoribosyltransferase compare
AO356_16170 -4.5 -12.7 acetolactate synthase 3 catalytic subunit compare
AO356_03810 -4.5 -6.8 anti-anti-sigma factor compare
AO356_18275 -4.4 -14.7 ornithine carbamoyltransferase compare
AO356_14430 -4.4 -10.2 anthranilate synthase compare
AO356_21400 -4.4 -5.3 isopropylmalate isomerase compare
AO356_16175 -4.4 -10.5 acetolactate synthase 3 regulatory subunit compare
AO356_06550 -4.3 -9.7 2-isopropylmalate synthase compare
AO356_02175 -4.3 -10.0 transaldolase compare
AO356_10340 -4.3 -16.2 phosphoserine phosphatase compare
AO356_19795 -4.2 -4.1 glycerol-3-phosphate dehydrogenase compare
AO356_09370 -4.2 -11.7 glutamate synthase compare
AO356_19180 -4.1 -8.7 cobalamin synthase compare
AO356_10300 -4.1 -6.9 3-phosphoglycerate dehydrogenase compare
AO356_12520 -4.1 -4.0 orotate phosphoribosyltransferase compare
AO356_08300 -4.0 -6.6 cobalt-precorrin-6X reductase compare
AO356_16050 -4.0 -2.7 glucose-6-phosphate isomerase compare
AO356_00545 -4.0 -13.9 methionine synthase compare
AO356_07915 -3.7 -2.6 exodeoxyribonuclease V subunit beta compare
AO356_19160 -3.7 -9.8 cobyric acid synthase compare
AO356_08275 -3.7 -5.5 precorrin isomerase compare
AO356_08735 -3.6 -12.9 phosphoserine phosphatase compare
AO356_14295 -3.5 -2.4 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
AO356_19165 -3.5 -5.7 adenosylcobinamide kinase compare
AO356_12780 -3.5 -6.6 argininosuccinate lyase compare
AO356_20475 -3.4 -4.0 hypothetical protein compare
AO356_05160 -3.4 -9.2 glucose-6-phosphate dehydrogenase compare
AO356_09795 -3.4 -2.3 imidazole glycerol phosphate synthase subunit HisF compare
AO356_03485 -3.3 -13.9 N-ethylammeline chlorohydrolase conserved
AO356_07910 -3.3 -2.2 exodeoxyribonuclease V subunit alpha compare
AO356_00505 -3.3 -12.5 cobalamin biosynthesis protein CobN conserved
AO356_19170 -3.1 -6.4 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
AO356_11315 -3.0 -2.0 shikimate dehydrogenase compare
AO356_00555 -3.0 -12.6 sulfite reductase compare
AO356_08290 -2.9 -3.3 precorrin-6Y C5,15-methyltransferase compare
AO356_19150 -2.9 -8.5 cobalamin biosynthesis protein CobD conserved
AO356_22200 -2.9 -9.5 sirohydrochlorin ferrochelatase compare
AO356_19140 -2.9 -14.7 cobyrinic acid a,c-diamide synthase conserved
AO356_07480 -2.8 -4.2 carbamoyl phosphate synthase large subunit compare
AO356_19175 -2.8 -5.5 alpha-ribazole phosphatase compare
AO356_00500 -2.7 -2.6 magnesium chelatase compare
AO356_11055 -2.6 -5.7 long-chain acyl-CoA thioester hydrolase compare
AO356_01750 -2.6 -5.1 ATP-dependent Clp protease proteolytic subunit compare
AO356_08270 -2.6 -10.4 precorrin-2 C20-methyltransferase conserved
AO356_16070 -2.6 -7.8 poly(A) polymerase compare
AO356_08280 -2.6 -5.1 oxidoreductase compare
AO356_19420 -2.5 -3.3 septum formation inhibitor compare
AO356_00530 -2.5 -5.3 precorrin-4 C11-methyltransferase compare
AO356_20830 -2.4 -4.8 phosphoadenosine phosphosulfate reductase compare
AO356_01745 -2.4 -6.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
AO356_08265 -2.3 -7.2 precorrin-3B C17-methyltransferase conserved
AO356_10000 -2.3 -5.3 hypothetical protein compare
AO356_12025 -2.3 -12.4 pyruvate carboxylase subunit B compare
AO356_08905 -2.2 -3.4 glycosyl transferase compare
AO356_12020 -2.2 -12.4 pyruvate carboxylase subunit A compare
AO356_08235 -2.2 -9.9 histidine kinase compare
AO356_19135 -2.2 -4.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
AO356_08895 -2.2 -2.6 GlcNAc-PI de-N-acetylase compare
AO356_19155 -2.2 -9.7 threonine-phosphate decarboxylase conserved
AO356_07005 -2.2 -2.3 ABC transporter ATP-binding protein compare
AO356_19460 -2.1 -10.1 allantoinase (EC 3.5.2.5) (from data) conserved
AO356_21275 -2.1 -3.3 peptidase compare
AO356_09730 -2.1 -7.2 nitrogen regulation protein NR(I) compare
AO356_17890 -2.0 -3.3 H-NS histone compare
AO356_00560 -2.0 -3.0 required for sulfate utilization, putative electron transport protein for sulfite reductase (from data) compare
AO356_15165 -1.9 -2.2 protein cII compare
AO356_14135 -1.9 -13.4 biotin synthase compare
AO356_27180 -1.9 -3.9 hypothetical protein compare
AO356_06385 -1.9 -4.5 recombinase XerD compare
AO356_12380 -1.9 -7.5 ATP-dependent DNA helicase RecG compare
AO356_15325 -1.8 -3.0 hypothetical protein compare
AO356_08295 -1.8 -4.0 cobalt-precorrin-6A synthase compare
AO356_17950 -1.8 -9.4 histidine kinase compare
AO356_10585 -1.8 -10.2 hypothetical protein compare
AO356_03435 -1.8 -4.4 integration host factor subunit beta compare
AO356_09185 -1.7 -2.1 hypothetical protein compare
AO356_19455 -1.7 -4.3 OHCU decarboxylase compare
AO356_18025 -1.7 -3.3 ATP-dependent DNA helicase RuvB compare
AO356_19450 -1.7 -5.0 allantoicase compare
AO356_13445 -1.7 -1.9 dihydroorotase compare
AO356_06960 -1.6 -6.9 histidinol-phosphate aminotransferase compare
AO356_01555 -1.6 -7.1 acyl-CoA dehydrogenase compare
AO356_16095 -1.6 -7.8 molecular chaperone DnaK compare
AO356_14155 -1.5 -5.9 dethiobiotin synthetase compare
AO356_00525 -1.5 -2.6 cobalamin biosynthesis protein CobE compare
AO356_15815 -1.5 -1.9 gamma-glutamyl kinase compare
AO356_19465 -1.5 -2.1 5-hydroxyisourate hydrolase [EC: 3.5.2.17] (from data) compare
AO356_16075 -1.5 -4.3 Fis family transcriptional regulator compare
AO356_10005 -1.5 -7.7 branched-chain amino acid permease (azaleucine resistance) compare
AO356_19050 -1.5 -2.8 cysteine synthase compare
AO356_20155 -1.5 -6.3 phosphate acyltransferase compare
AO356_14150 -1.4 -8.3 malonyl-[acyl-carrier protein] O-methyltransferase BioC compare
AO356_18020 -1.4 -3.8 ATP-dependent DNA helicase RuvA compare
AO356_05670 -1.4 -2.2 recombinase RecA compare
AO356_12725 -1.4 -4.9 recombinase XerC compare
AO356_12375 -1.4 -8.4 histidine kinase compare
AO356_00940 -1.4 -6.7 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) conserved
AO356_03070 -1.4 -9.4 histidine kinase compare
AO356_29315 -1.3 -3.1 acyl-CoA dehydrogenase compare
AO356_18730 -1.3 -7.5 arginine N-succinyltransferase compare
AO356_11465 -1.3 -6.6 DNA polymerase I compare
AO356_14140 -1.3 -8.9 8-amino-7-oxononanoate synthase compare
AO356_07370 -1.3 -2.8 nicotinate-nucleotide pyrophosphorylase compare
AO356_03800 -1.3 -1.9 histidine kinase compare
AO356_14145 -1.2 -5.4 transporter compare
AO356_12900 -1.2 -3.9 exopolyphosphatase compare
AO356_06050 -1.2 -8.6 protein-PII uridylyltransferase compare
AO356_07390 -1.2 -2.2 polyribonucleotide nucleotidyltransferase compare
AO356_13570 -1.2 -8.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
AO356_12015 -1.2 -6.1 LysR family transcriptional regulator compare
AO356_05215 -1.2 -4.6 glucokinase compare
AO356_20470 -1.2 -2.3 hypothetical protein compare
AO356_06065 -1.2 -2.9 ArsC family transcriptional regulator compare
AO356_18145 -1.1 -5.3 quinolinate synthase A compare
AO356_21330 -1.1 -6.5 aromatic amino acid aminotransferase compare
AO356_05185 -1.1 -6.3 sugar ABC transporter permease compare
AO356_20835 -1.1 -3.8 phosphoserine phosphatase compare
AO356_30345 -1.1 -4.2 IclR family transcriptional regulator compare
AO356_10075 -1.1 -3.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
AO356_21410 -1.1 -3.9 SAM-dependent methyltransferase compare
AO356_05190 -1.0 -8.5 sugar ABC transporter permease compare
AO356_08610 -1.0 -4.5 exoribonuclease R compare
AO356_00520 -1.0 -1.0 cobalt transporter compare
AO356_02315 -1.0 -3.0 DNA topoisomerase I compare
AO356_13425 -1.0 -2.7 hypothetical protein compare
AO356_03095 -1.0 -4.8 protease HtpX compare
AO356_27230 -1.0 -3.7 hypothetical protein compare
AO356_05180 -1.0 -4.2 sugar ABC transporter ATP-binding protein compare
AO356_11030 -0.9 -6.7 phosphate ABC transporter ATP-binding protein compare
AO356_10330 -0.9 -7.6 threonine dehydratase compare
AO356_11680 -0.9 -1.7 chromosome partitioning protein ParB compare
AO356_11675 -0.9 -5.3 chromosome partitioning protein compare
AO356_25995 -0.9 -2.3 acetylglucosaminylphosphatidylinositol deacetylase compare
AO356_12005 -0.9 -6.6 transcriptional regulator compare
AO356_09725 -0.9 -3.8 histidine kinase compare
AO356_22825 -0.9 -2.4 transcriptional regulator compare
AO356_07920 -0.9 -2.9 exodeoxyribonuclease V subunit gamma compare
AO356_08385 -0.9 -2.2 urease subunit beta compare
AO356_15545 -0.9 -3.2 GNAT family acetyltransferase compare
AO356_05225 -0.9 -3.7 glyceraldehyde-3-phosphate dehydrogenase compare
AO356_08585 -0.9 -2.6 50S ribosomal protein L9 compare
AO356_27250 -0.9 -3.6 hypothetical protein compare
AO356_05205 -0.9 -5.3 histidine kinase compare
AO356_27215 -0.8 -2.7 hypothetical protein compare
AO356_01810 -0.8 -5.1 MFS transporter compare
AO356_06995 -0.8 -3.3 outer membrane lipid asymmetry maintenance protein MlaD compare
AO356_02635 -0.8 -2.9 pathogenicity island 1 effector protein compare
AO356_08400 -0.8 -2.2 chaperone modulatory protein CbpM compare
AO356_03270 -0.8 -2.3 terminase compare
AO356_24250 -0.8 -3.8 ABC transporter ATP-binding protein compare
AO356_04815 -0.8 -2.1 hypothetical protein compare
AO356_25865 -0.8 -1.5 peroxidase compare
AO356_05210 -0.8 -2.6 chemotaxis protein CheY compare
AO356_13595 -0.8 -5.1 amino acid ABC transporter substrate-binding protein compare
AO356_00605 -0.8 -3.1 TetR family transcriptional regulator compare
AO356_17985 -0.8 -3.4 cold-shock protein compare
AO356_16875 -0.8 -5.7 GntR family transcriptional regulator compare
AO356_11025 -0.8 -2.6 transcriptional regulator PhoU compare
AO356_16670 -0.8 -5.8 adenylylsulfate kinase compare
AO356_05195 -0.8 -4.8 sugar ABC transporter substrate-binding protein compare
AO356_14870 -0.8 -3.9 dTDP-4-dehydrorhamnose reductase compare
AO356_17830 -0.8 -3.4 pyruvate kinase compare
AO356_10695 -0.7 -4.6 diguanylate cyclase compare
AO356_24990 -0.7 -1.8 4-oxalocrotonate tautomerase compare
AO356_02210 -0.7 -1.6 copper-binding protein compare
AO356_27150 -0.7 -2.5 threonine synthase compare
AO356_29965 -0.7 -2.1 2-polyprenyl-6-methoxyphenol hydroxylase compare
AO356_07845 -0.7 -5.0 MFS transporter compare
AO356_19520 -0.7 -2.4 isochorismatase compare
AO356_21125 -0.7 -2.8 cyclic peptide transporter compare
AO356_01970 -0.7 -3.5 phage capsid protein compare
AO356_28675 -0.7 -1.6 glycosyl hydrolase compare
AO356_22905 -0.7 -2.7 transcriptional regulator compare
AO356_26350 -0.7 -1.9 acetyl-CoA acetyltransferase compare


Specific Phenotypes

For 11 genes in this experiment

For nitrogen source Adenosine in Pseudomonas fluorescens FW300-N2C3

For nitrogen source Adenosine across organisms