Experiment set6IT050 for Sphingomonas koreensis DSMZ 15582

Compare to:

D-Cellobiose carbon source; no added vitamins

Genes with specific phenotypes:

  gene name fitness t score description  
Ga0059261_1166 -2.9 -17.8 Beta-glucosidase (EC 3.2.1.21) (from data) compare
Ga0059261_4049 -2.0 -5.8 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs compare
Ga0059261_1932 -1.7 -9.2 Peptidase family M23 compare
Ga0059261_3880 -1.7 -7.3 Glycosyltransferase compare
Ga0059261_3472 -1.6 -5.7 Sporulation related domain compare
Ga0059261_1453 -1.6 -6.7 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs compare
Ga0059261_2222 -1.6 -5.2 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Ga0059261_3770 -1.6 -6.8 Beta-lactamase class A compare
Ga0059261_3930 -1.4 -7.0 Putative protein-S-isoprenylcysteine methyltransferase compare
Ga0059261_3878 -1.4 -6.5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Ga0059261_3182 -1.3 -6.6 Opacity protein and related surface antigens compare
Ga0059261_3950 -1.3 -8.0 Type II secretion system (T2SS), protein L compare
Ga0059261_3952 -1.3 -6.4 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Ga0059261_3953 -1.2 -7.4 Type II secretory pathway, component PulF compare
Ga0059261_3099 -1.1 -6.0 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) compare
Ga0059261_2662 -1.1 -6.6 Transcriptional regulators compare
Ga0059261_0837 -1.0 -5.8 3-hydroxyacyl-CoA dehydrogenase compare
Ga0059261_3265 +1.1 8.8 Glycerol-3-phosphate dehydrogenase compare
Ga0059261_1505 +1.2 5.3 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) compare
Ga0059261_2044 +1.2 6.0 peptide chain release factor 3 compare
Ga0059261_3881 +1.4 5.5 Osmosensitive K+ channel histidine kinase compare
Ga0059261_3207 +1.5 6.9 Disulfide bond chaperones of the HSP33 family compare
Ga0059261_3163 +1.5 11.7 hypothetical protein compare
Ga0059261_1414 +1.5 8.1 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF compare
Ga0059261_1458 +1.6 11.0 Cystathionine beta-lyases/cystathionine gamma-synthases compare
Ga0059261_0257 +1.6 8.4 hypothetical protein compare
Ga0059261_3403 +1.8 13.6 Uncharacterized protein conserved in bacteria compare
Ga0059261_2695 +1.9 14.1 Methyltransferase domain compare
Ga0059261_3807 +2.0 10.6 Uncharacterized conserved protein compare


Specific phenotypes for nutrient D-Cellobiose across organisms