Experiment set6IT046 for Dechlorosoma suillum PS

Compare to:

Sodium propionate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -8.4 -9.9 phosphotransferase system HPr (HPr) family protein compare
Dsui_1576 -5.3 -3.0 dihydrolipoamide dehydrogenase compare
Dsui_1577 -5.2 -3.0 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0742 -5.2 -9.5 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0423 -5.1 -7.8 putative permease compare
Dsui_2816 -5.0 -3.4 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0519 -4.8 -23.5 Methylmalonyl-CoA mutase (EC 5.4.99.2) (from data) conserved
Dsui_2717 -4.7 -5.6 RNA polymerase-binding protein DksA compare
Dsui_2881 -4.5 -10.2 8-amino-7-oxononanoate synthase compare
Dsui_0516 -4.4 -12.0 Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) (from data) conserved
Dsui_2883 -4.3 -7.5 biotin biosynthesis protein BioC compare
Dsui_3139 -4.3 -2.9 outer membrane assembly lipoprotein YfgL compare
Dsui_2882 -4.1 -10.2 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_0517 -4.1 -8.3 Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data) conserved
Dsui_2880 -4.1 -16.3 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_1402 -4.1 -5.0 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_0518 -3.9 -9.5 methylmalonyl-CoA-mutase-associated GTPase MeaB (from data) conserved
Dsui_2884 -3.8 -9.1 dethiobiotin synthase compare
Dsui_1529 -3.8 -5.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1297 -3.7 -6.1 biotin synthetase compare
Dsui_1578 -3.5 -3.4 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1970 -3.4 -7.7 metalloendopeptidase-like membrane protein compare
Dsui_0025 -3.4 -2.3 hypothetical protein compare
Dsui_2651 -3.4 -1.9 ankyrin repeat-containing protein compare
Dsui_1599 -3.2 -19.3 putative enzyme of heme biosynthesis compare
Dsui_1600 -3.2 -15.2 putative enzyme of heme biosynthesis compare
Dsui_3524 -3.0 -10.7 signal transduction histidine kinase compare
Dsui_0870 -3.0 -14.1 putative membrane protein compare
Dsui_3523 -2.9 -9.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1446 -2.9 -3.0 succinyl-CoA synthetase, alpha subunit compare
Dsui_1445 -2.9 -2.8 succinyl-CoA synthetase, beta subunit compare
Dsui_0033 -2.8 -1.9 Zn-dependent protease with chaperone function compare
Dsui_2189 -2.8 -3.3 acyl-CoA synthetase (NDP forming) compare
Dsui_0023 -2.8 -1.9 acetylornithine/succinylornithine aminotransferase compare
Dsui_0174 -2.8 -1.9 hypothetical protein compare
Dsui_3298 -2.8 -16.3 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1819 -2.6 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_2893 -2.6 -1.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1978 -2.6 -2.1 putative lipoprotein compare
Dsui_1674 -2.6 -1.8 EAL domain-containing protein compare
Dsui_2870 -2.5 -5.8 putative permease compare
Dsui_1852 -2.5 -1.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1893 -2.4 -1.4 putative membrane protein compare
Dsui_1580 -2.4 -6.4 PAS domain S-box compare
Dsui_2772 -2.4 -1.6 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_3099 -2.4 -1.6 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_1408 -2.4 -0.8 NifZ domain-containing protein compare
Dsui_1825 -2.3 -1.6 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_1403 -2.3 -2.7 putative NTP binding protein (contains STAS domain) compare
Dsui_0003 -2.3 -5.4 putative Zn-dependent protease compare
Dsui_2178 -2.3 -2.1 hypothetical protein compare
Dsui_2306 -2.3 -5.4 transcriptional regulator compare
Dsui_2518 -2.2 -1.5 hypothetical protein compare
Dsui_0417 -2.2 -1.5 gamma-glutamyltransferase compare
Dsui_0401 -2.2 -1.4 nucleoside-diphosphate-sugar epimerase compare
Dsui_1619 -2.2 -1.5 putative membrane-associated, metal-dependent hydrolase compare
Dsui_1404 -2.2 -1.5 ABC-type multidrug transport system, ATPase component compare
Dsui_1045 -2.2 -2.1 hypothetical protein compare
Dsui_1242 -2.2 -1.5 hypothetical protein compare
Dsui_0297 -2.2 -1.5 sugar fermentation stimulation protein compare
Dsui_3229 -2.2 -1.8 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_3448 -2.2 -1.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3465 -2.1 -1.5 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_2330 -2.1 -1.4 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3431 -2.1 -1.4 Protein of unknown function (DUF3240) compare
Dsui_2443 -2.1 -2.0 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_2027 -2.1 -1.4 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_0520 -2.1 -12.6 transcriptional regulator compare
Dsui_1857 -2.1 -1.3 putative permease, DMT superfamily compare
Dsui_1620 -2.1 -1.4 PAP2 (acid phosphatase) superfamily protein compare
Dsui_0966 -2.1 -2.0 methyl-accepting chemotaxis protein compare
Dsui_0469 -2.0 -4.6 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_1356 -2.0 -0.9 hypothetical protein compare
Dsui_0487 -2.0 -1.4 hemerythrin HHE cation binding domain-containing protein compare
Dsui_3063 -2.0 -2.4 transcription elongation factor GreA compare
Dsui_1396 -2.0 -1.4 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_0116 -2.0 -1.4 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_3424 -2.0 -6.0 ATP:cob(I)alamin adenosyltransferase compare
Dsui_3478 -2.0 -1.0 hypothetical protein compare
Dsui_3105 -2.0 -13.5 CBS domain-containing protein compare
Dsui_1094 -2.0 -2.9 shikimate kinase compare
Dsui_0512 -2.0 -1.4 Methylmalonyl-CoA epimerase (EC 5.1.99.1) (from data) compare
Dsui_3393 -2.0 -6.7 Kef-type K+ transport system, membrane component compare
Dsui_0105 -2.0 -1.9 NAD-dependent aldehyde dehydrogenase compare
Dsui_1398 -2.0 -8.9 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_0568 -2.0 -3.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2457 -2.0 -9.8 GTP-binding protein LepA compare
Dsui_3231 -1.9 -1.3 hypothetical protein compare
Dsui_3270 -1.9 -2.2 2'-5' RNA ligase compare
Dsui_2342 -1.9 -1.3 multidrug resistance efflux pump compare
Dsui_2348 -1.9 -2.4 hypothetical protein compare
Dsui_1669 -1.9 -1.3 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0787 -1.9 -13.9 putative membrane protein compare
Dsui_3240 -1.9 -9.8 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3426 -1.9 -1.3 transcriptional regulator compare
Dsui_0209 -1.9 -1.3 hypothetical protein compare
Dsui_1401 -1.9 -5.5 surface lipoprotein compare
Dsui_3115 -1.9 -0.9 hypothetical protein compare
Dsui_2997 -1.9 -1.2 hypothetical protein compare
Dsui_0477 -1.9 -3.2 tol-pal system protein YbgF compare
Dsui_3392 -1.9 -9.6 carboxylate-amine ligase, YbdK family compare
Dsui_1442 -1.9 -1.2 putative efflux protein, MATE family compare
Dsui_3366 -1.8 -1.2 glycerophosphoryl diester phosphodiesterase compare
Dsui_0316 -1.8 -1.2 hypothetical protein compare
Dsui_0253 -1.8 -1.2 HIRAN domain-containing protein compare
Dsui_3026 -1.8 -1.1 hydrogenase maturation protease compare
Dsui_2866 -1.8 -1.2 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_3114 -1.8 -1.2 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3227 -1.8 -6.4 2-isopropylmalate synthase compare
Dsui_2321 -1.8 -1.2 site-specific recombinase compare
Dsui_1660 -1.8 -1.2 outer membrane cobalamin receptor protein compare
Dsui_3077 -1.8 -1.2 hypothetical protein compare
Dsui_2195 -1.8 -11.1 trigger factor compare
Dsui_3520 -1.8 -14.5 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_3117 -1.8 -1.2 hypothetical protein compare
Dsui_0738 -1.7 -1.3 secondary thiamine-phosphate synthase enzyme compare
Dsui_1523 -1.7 -1.2 drug resistance transporter, EmrB/QacA subfamily compare
Dsui_3178 -1.7 -1.2 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1399 -1.7 -8.4 conserved hypothetical integral membrane protein compare
Dsui_1618 -1.7 -1.2 signal transduction histidine kinase compare
Dsui_1368 -1.7 -1.2 hypothetical protein compare
Dsui_1311 -1.7 -1.1 hypothetical protein compare
Dsui_0945 -1.7 -0.9 Iron-sulfur cluster assembly accessory protein compare
Dsui_1659 -1.7 -1.1 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2269 -1.7 -7.9 SOS regulatory protein LexA compare
Dsui_2433 -1.7 -10.0 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_1855 -1.6 -1.1 hypothetical protein compare
Dsui_2687 -1.6 -5.0 RIP metalloprotease RseP compare
Dsui_0039 -1.6 -3.8 dimethyladenosine transferase compare
Dsui_2352 -1.6 -1.1 hypothetical protein compare
Dsui_1490 -1.6 -1.8 DNA-binding protein, excisionase family compare
Dsui_0171 -1.6 -1.5 putative transcriptional regulator compare
Dsui_3343 -1.6 -1.0 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_2921 -1.6 -1.9 isochorismate synthase family protein compare
Dsui_2312 -1.6 -1.1 3-hydroxybutyrate dehydrogenase compare
Dsui_3226 -1.6 -1.5 putative SAM-dependent methyltransferase compare
Dsui_1553 -1.6 -0.9 regulator of competence-specific genes compare
Dsui_3112 -1.6 -2.5 hypothetical protein compare
Dsui_3521 -1.6 -9.3 membrane-fusion protein compare
Dsui_1296 -1.6 -1.1 putative amidophosphoribosyltransferase compare
Dsui_0173 -1.6 -1.1 site-specific DNA methylase compare
Dsui_1701 -1.6 -1.1 restriction endonuclease compare
Dsui_1275 -1.6 -2.1 protein-export chaperone SecB compare
Dsui_1433 -1.6 -0.8 chemotaxis protein compare
Dsui_3377 -1.6 -1.1 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0871 -1.6 -0.5 hypothetical protein compare
Dsui_1032 -1.6 -7.5 Flp pilus assembly protein TadD compare
Dsui_2991 -1.6 -2.3 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1605 -1.6 -1.1 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0978 -1.6 -1.0 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_1888 -1.6 -1.0 putative domain HDIG-containing protein compare
Dsui_2145 -1.5 -3.2 FtsH-interacting integral membrane protein compare
Dsui_0733 -1.5 -1.0 hypothetical protein compare
Dsui_0176 -1.5 -1.0 ribosome modulation factor compare
Dsui_0692 -1.5 -2.5 hypothetical protein compare
Dsui_1782 -1.5 -1.0 flagellar protein FlaG compare
Dsui_1400 -1.5 -6.6 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_2975 -1.5 -1.0 TonB-dependent siderophore receptor compare
Dsui_2440 -1.5 -8.2 ClpP class periplasmic serine protease compare
Dsui_0618 -1.5 -1.4 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_0691 -1.5 -0.8 hypothetical protein compare
Dsui_2969 -1.5 -1.4 uroporphyrin-III C-methyltransferase compare
Dsui_1817 -1.5 -1.0 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_0251 -1.5 -1.0 putative S-adenosylmethionine-dependent methyltransferase, YraL family compare
Dsui_1947 -1.5 -1.7 nucleotide sugar dehydrogenase compare
Dsui_1104 -1.5 -1.0 putative thioesterase compare
Dsui_0869 -1.5 -8.1 hypothetical protein compare
Dsui_2741 -1.5 -1.0 PAS domain S-box compare
Dsui_0431 -1.5 -1.7 putative permease, DMT superfamily compare
Dsui_1370 -1.5 -1.0 putative permease, DMT superfamily compare
Dsui_2128 -1.5 -3.0 uncharacterized protein involved in outer membrane biogenesis compare
Dsui_2127 -1.5 -0.8 flavodoxin reductase family protein compare
Dsui_0846 -1.5 -2.6 glucose-inhibited division protein A compare
Dsui_0558 -1.5 -1.0 tetratricopeptide repeat protein compare
Dsui_2228 -1.5 -1.0 Zn-dependent alcohol dehydrogenase compare
Dsui_3423 -1.5 -0.9 hydroxypyruvate isomerase compare
Dsui_3441 -1.5 -1.0 cation/multidrug efflux pump compare
Dsui_0968 -1.5 -1.6 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_2809 -1.5 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0436 -1.5 -1.0 dienelactone hydrolase-like enzyme compare
Dsui_3259 -1.5 -1.0 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_3151 -1.5 -0.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0620 -1.5 -1.0 Fe2+-dicitrate sensor, membrane component compare
Dsui_0306 -1.5 -1.0 putative permease compare
Dsui_3125 -1.5 -1.7 cytochrome c, mono- and diheme variants family compare
Dsui_1466 -1.5 -3.7 ABC-type transport system, involved in lipoprotein release, permease component compare
Dsui_2122 -1.5 -1.0 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_0765 -1.5 -1.4 conserved hypothetical protein, proteobacterial compare
Dsui_0510 -1.5 -1.0 ferredoxin-type protein, NapH/MauN family compare
Dsui_1675 -1.5 -1.0 hypothetical protein compare
Dsui_1149 -1.5 -1.4 Zn-dependent protease with chaperone function compare
Dsui_0778 -1.5 -1.9 small protein A (tmRNA-binding) compare
Dsui_2895 -1.4 -1.0 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1840 -1.4 -1.4 hypothetical protein compare
Dsui_1198 -1.4 -4.8 apolipoprotein N-acyltransferase compare
Dsui_0022 -1.4 -1.0 hypothetical protein compare
Dsui_2429 -1.4 -1.0 putative permease compare
Dsui_0203 -1.4 -0.7 hypothetical protein compare
Dsui_0792 -1.4 -1.9 hypothetical protein compare
Dsui_1851 -1.4 -1.0 signal transduction histidine kinase compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source Sodium propionate in Dechlorosoma suillum PS

For carbon source Sodium propionate across organisms