Experiment set6IT044 for Dechlorosoma suillum PS

Compare to:

Sodium D,L-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -10.7 -8.8 phosphotransferase system HPr (HPr) family protein compare
Dsui_0423 -5.6 -9.3 putative permease compare
Dsui_1577 -5.5 -3.1 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_2816 -5.3 -3.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0742 -5.3 -8.1 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_1529 -5.3 -3.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3139 -4.3 -4.2 outer membrane assembly lipoprotein YfgL compare
Dsui_1576 -4.1 -3.0 dihydrolipoamide dehydrogenase compare
Dsui_0520 -3.9 -21.2 transcriptional regulator compare
Dsui_2651 -3.7 -2.1 ankyrin repeat-containing protein compare
Dsui_0025 -3.7 -2.5 hypothetical protein compare
Dsui_2717 -3.7 -6.6 RNA polymerase-binding protein DksA compare
Dsui_1578 -3.5 -5.8 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1094 -3.4 -3.6 shikimate kinase compare
Dsui_1978 -3.3 -3.3 putative lipoprotein compare
Dsui_1446 -3.2 -4.0 succinyl-CoA synthetase, alpha subunit compare
Dsui_1096 -3.2 -20.0 glutamate synthase family protein compare
Dsui_1097 -3.2 -10.7 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_0033 -3.1 -2.1 Zn-dependent protease with chaperone function compare
Dsui_1490 -3.1 -2.1 DNA-binding protein, excisionase family compare
Dsui_0023 -3.1 -2.1 acetylornithine/succinylornithine aminotransferase compare
Dsui_0174 -3.1 -2.1 hypothetical protein compare
Dsui_3524 -3.1 -11.1 signal transduction histidine kinase compare
Dsui_2433 -3.0 -13.8 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_1445 -3.0 -4.1 succinyl-CoA synthetase, beta subunit compare
Dsui_1581 -3.0 -3.0 response regulator compare
Dsui_1599 -3.0 -16.5 putative enzyme of heme biosynthesis compare
Dsui_1674 -2.9 -2.0 EAL domain-containing protein compare
Dsui_0870 -2.9 -13.7 putative membrane protein compare
Dsui_3298 -2.8 -16.9 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1819 -2.8 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1852 -2.7 -1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1045 -2.7 -1.9 hypothetical protein compare
Dsui_1893 -2.7 -1.5 putative membrane protein compare
Dsui_0171 -2.7 -1.8 putative transcriptional regulator compare
Dsui_1297 -2.6 -9.1 biotin synthetase compare
Dsui_0417 -2.6 -1.8 gamma-glutamyltransferase compare
Dsui_1600 -2.6 -11.2 putative enzyme of heme biosynthesis compare
Dsui_1408 -2.6 -0.8 NifZ domain-containing protein compare
Dsui_2518 -2.6 -1.7 hypothetical protein compare
Dsui_1825 -2.5 -1.7 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_1970 -2.5 -9.6 metalloendopeptidase-like membrane protein compare
Dsui_1242 -2.5 -1.7 hypothetical protein compare
Dsui_3465 -2.5 -1.7 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_1619 -2.5 -1.7 putative membrane-associated, metal-dependent hydrolase compare
Dsui_1059 -2.4 -2.2 thiamine monophosphate synthase compare
Dsui_0105 -2.4 -2.3 NAD-dependent aldehyde dehydrogenase compare
Dsui_3523 -2.4 -10.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2027 -2.4 -1.6 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_1396 -2.4 -1.6 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_0792 -2.3 -2.2 hypothetical protein compare
Dsui_0116 -2.3 -1.6 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_1620 -2.3 -1.5 PAP2 (acid phosphatase) superfamily protein compare
Dsui_1884 -2.3 -2.6 histidine kinase compare
Dsui_3231 -2.3 -1.6 hypothetical protein compare
Dsui_1857 -2.3 -1.4 putative permease, DMT superfamily compare
Dsui_2884 -2.3 -9.4 dethiobiotin synthase compare
Dsui_3478 -2.2 -1.0 hypothetical protein compare
Dsui_3026 -2.2 -1.3 hydrogenase maturation protease compare
Dsui_3114 -2.2 -1.4 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3006 -2.2 -1.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_1402 -2.2 -4.0 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_0209 -2.2 -1.5 hypothetical protein compare
Dsui_3115 -2.2 -1.0 hypothetical protein compare
Dsui_1669 -2.2 -1.4 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0618 -2.2 -1.5 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_2866 -2.2 -1.5 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_2881 -2.1 -10.4 8-amino-7-oxononanoate synthase compare
Dsui_1442 -2.1 -1.4 putative efflux protein, MATE family compare
Dsui_3117 -2.1 -1.4 hypothetical protein compare
Dsui_2969 -2.1 -1.5 uroporphyrin-III C-methyltransferase compare
Dsui_3257 -2.1 -2.0 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_3077 -2.1 -1.4 hypothetical protein compare
Dsui_2883 -2.1 -8.1 biotin biosynthesis protein BioC compare
Dsui_3099 -2.1 -2.4 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_3125 -2.1 -2.0 cytochrome c, mono- and diheme variants family compare
Dsui_3178 -2.1 -1.4 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1660 -2.1 -1.4 outer membrane cobalamin receptor protein compare
Dsui_2330 -2.1 -1.9 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_2443 -2.0 -2.9 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0945 -2.0 -1.1 Iron-sulfur cluster assembly accessory protein compare
Dsui_3448 -2.0 -1.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1368 -2.0 -1.4 hypothetical protein compare
Dsui_1311 -2.0 -1.3 hypothetical protein compare
Dsui_1523 -2.0 -1.4 drug resistance transporter, EmrB/QacA subfamily compare
Dsui_2352 -2.0 -1.4 hypothetical protein compare
Dsui_0487 -2.0 -1.6 hemerythrin HHE cation binding domain-containing protein compare
Dsui_0778 -2.0 -2.3 small protein A (tmRNA-binding) compare
Dsui_3295 -2.0 -7.9 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_1394 -2.0 -3.1 hypothetical protein compare
Dsui_0431 -2.0 -1.9 putative permease, DMT superfamily compare
Dsui_1659 -2.0 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2454 -1.9 -9.0 Positive regulator of sigma E activity compare
Dsui_2312 -1.9 -1.3 3-hydroxybutyrate dehydrogenase compare
Dsui_1165 -1.9 -1.3 Ni,Fe-hydrogenase I large subunit compare
Dsui_2178 -1.9 -2.2 hypothetical protein compare
Dsui_2772 -1.9 -1.7 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_3377 -1.9 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0003 -1.9 -4.7 putative Zn-dependent protease compare
Dsui_2339 -1.9 -1.3 putative domain HDIG-containing protein compare
Dsui_0477 -1.9 -3.2 tol-pal system protein YbgF compare
Dsui_2397 -1.9 -3.7 cAMP-binding protein compare
Dsui_2294 -1.9 -1.3 phasin family protein compare
Dsui_3392 -1.9 -12.9 carboxylate-amine ligase, YbdK family compare
Dsui_2424 -1.9 -0.6 hypothetical protein compare
Dsui_2228 -1.9 -1.2 Zn-dependent alcohol dehydrogenase compare
Dsui_0558 -1.9 -1.3 tetratricopeptide repeat protein compare
Dsui_0513 -1.9 -3.6 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0568 -1.9 -4.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1855 -1.9 -1.2 hypothetical protein compare
Dsui_2981 -1.8 -2.9 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_2457 -1.8 -8.4 GTP-binding protein LepA compare
Dsui_2669 -1.8 -3.5 ankyrin repeat-containing protein compare
Dsui_2880 -1.8 -11.1 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_3158 -1.8 -4.0 Na+/H+ dicarboxylate symporter compare
Dsui_2822 -1.8 -1.0 hypothetical protein compare
Dsui_1840 -1.8 -1.2 hypothetical protein compare
Dsui_0733 -1.8 -1.2 hypothetical protein compare
Dsui_1818 -1.8 -4.6 anthranilate phosphoribosyltransferase compare
Dsui_0176 -1.8 -1.2 ribosome modulation factor compare
Dsui_1356 -1.8 -1.1 hypothetical protein compare
Dsui_1605 -1.8 -1.2 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_3259 -1.8 -1.2 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_1370 -1.8 -1.2 putative permease, DMT superfamily compare
Dsui_1618 -1.8 -1.7 signal transduction histidine kinase compare
Dsui_0436 -1.8 -1.2 dienelactone hydrolase-like enzyme compare
Dsui_1701 -1.8 -1.2 restriction endonuclease compare
Dsui_2341 -1.8 -1.2 ABC-type multidrug transport system, ATPase component compare
Dsui_0553 -1.8 -1.2 putative nitrogen fixation protein compare
Dsui_1104 -1.8 -1.2 putative thioesterase compare
Dsui_0765 -1.8 -1.7 conserved hypothetical protein, proteobacterial compare
Dsui_3469 -1.8 -2.0 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_0871 -1.8 -0.6 hypothetical protein compare
Dsui_0306 -1.8 -1.2 putative permease compare
Dsui_3371 -1.8 -1.7 putative oxidoreductase, aryl-alcohol dehydrogenase like protein compare
Dsui_2935 -1.8 -1.2 NAD/NADP transhydrogenase alpha subunit compare
Dsui_2997 -1.8 -1.6 hypothetical protein compare
Dsui_2429 -1.8 -1.2 putative permease compare
Dsui_2975 -1.8 -1.7 TonB-dependent siderophore receptor compare
Dsui_3351 -1.8 -1.2 cytochrome c peroxidase compare
Dsui_1433 -1.8 -0.8 chemotaxis protein compare
Dsui_1888 -1.8 -1.1 putative domain HDIG-containing protein compare
Dsui_3240 -1.7 -10.4 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3393 -1.7 -7.5 Kef-type K+ transport system, membrane component compare
Dsui_2384 -1.7 -1.2 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_2127 -1.7 -1.0 flavodoxin reductase family protein compare
Dsui_1296 -1.7 -1.6 putative amidophosphoribosyltransferase compare
Dsui_2033 -1.7 -1.2 transcriptional regulator compare
Dsui_1817 -1.7 -1.2 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_0837 -1.7 -2.5 tRNA modification GTPase TrmE compare
Dsui_3477 -1.7 -1.2 PAS domain S-box compare
Dsui_3230 -1.7 -5.0 hypothetical protein compare
Dsui_2919 -1.7 -1.1 addiction module antidote protein, HigA family compare
Dsui_0029 -1.7 -1.1 putative pyrophosphatase compare
Dsui_0200 -1.7 -1.1 hypothetical protein compare
Dsui_0110 -1.7 -1.2 Histidine kinase compare
Dsui_2991 -1.7 -3.3 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3008 -1.7 -1.1 hydrogenase expression/formation protein compare
Dsui_3120 -1.7 -1.1 cAMP-binding protein compare
Dsui_3157 -1.7 -1.1 Fatty acid cis/trans isomerase (CTI) compare
Dsui_0308 -1.7 -1.9 Major Facilitator Superfamily transporter compare
Dsui_3441 -1.7 -1.6 cation/multidrug efflux pump compare
Dsui_1000 -1.7 -1.1 hypothetical protein compare
Dsui_2951 -1.7 -1.1 putative iron-regulated membrane protein compare
Dsui_1160 -1.7 -1.1 hydrogenase assembly chaperone HypC/HupF compare
Dsui_2076 -1.7 -1.6 cytochrome c, mono- and diheme variants family compare
Dsui_0747 -1.7 -4.9 glutamate--cysteine ligase compare
Dsui_2329 -1.7 -1.1 putative dehydrogenase compare
Dsui_3151 -1.7 -0.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3366 -1.7 -1.5 glycerophosphoryl diester phosphodiesterase compare
Dsui_0157 -1.7 -1.1 sulfite oxidase-like oxidoreductase compare
Dsui_0392 -1.7 -1.5 diacylglycerol kinase compare
Dsui_2809 -1.6 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0725 -1.6 -4.7 putative hydrolase of the alpha/beta superfamily compare
Dsui_3318 -1.6 -2.2 cytochrome c, mono- and diheme variants family compare
Dsui_1833 -1.6 -1.1 nitrate transport ATP-binding subunits C and D compare
Dsui_2882 -1.6 -8.0 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2893 -1.6 -2.9 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3149 -1.6 -1.1 electron transfer flavoprotein, alpha subunit compare
Dsui_3443 -1.6 -1.1 RND family efflux transporter, MFP subunit compare
Dsui_1851 -1.6 -1.1 signal transduction histidine kinase compare
Dsui_1044 -1.6 -1.1 hypothetical protein compare
Dsui_2740 -1.6 -1.1 putative integral membrane protein compare
Dsui_1668 -1.6 -1.0 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase compare
Dsui_2543 -1.6 -0.5 hypothetical protein compare
Dsui_0621 -1.6 -0.9 RNA polymerase sigma factor, sigma-70 family compare
Dsui_0203 -1.6 -0.7 hypothetical protein compare
Dsui_3520 -1.6 -13.1 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_0620 -1.6 -1.8 Fe2+-dicitrate sensor, membrane component compare
Dsui_2094 -1.6 -1.1 putative autotransporter protein compare
Dsui_2349 -1.6 -1.5 Zn-dependent hydrolase, glyoxylase compare
Dsui_3361 -1.6 -1.1 hypothetical protein compare
Dsui_2476 -1.6 -0.5 hypothetical protein compare
Dsui_0975 -1.6 -1.5 acyl-CoA dehydrogenase compare
Dsui_3389 -1.6 -1.1 enoyl-CoA hydratase/carnithine racemase compare
Dsui_2072 -1.6 -1.1 Pirin-related protein compare
Dsui_1742 -1.6 -1.1 flagellar hook-associated protein 3 compare
Dsui_3426 -1.6 -1.8 transcriptional regulator compare
Dsui_3343 -1.6 -1.2 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_0974 -1.6 -1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium D,L-Lactate across organisms