Experiment set6IT043 for Dechlorosoma suillum PS

Compare to:

Sodium L-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -10.6 -8.6 phosphotransferase system HPr (HPr) family protein compare
Dsui_1584 -6.0 -4.8 hypothetical protein compare
Dsui_1576 -5.5 -3.1 dihydrolipoamide dehydrogenase compare
Dsui_0742 -5.3 -9.5 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_2816 -5.2 -3.6 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0423 -5.2 -8.7 putative permease compare
Dsui_1583 -5.0 -19.1 (4Fe-4S) cluster-containing protein compare
Dsui_3139 -4.5 -3.1 outer membrane assembly lipoprotein YfgL compare
Dsui_0520 -4.1 -19.5 transcriptional regulator compare
Dsui_1529 -3.8 -6.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1581 -3.8 -3.3 response regulator compare
Dsui_1970 -3.7 -8.9 metalloendopeptidase-like membrane protein compare
Dsui_2651 -3.6 -2.0 ankyrin repeat-containing protein compare
Dsui_0025 -3.5 -2.3 hypothetical protein compare
Dsui_1094 -3.4 -3.3 shikimate kinase compare
Dsui_1577 -3.3 -3.4 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1599 -3.2 -12.6 putative enzyme of heme biosynthesis compare
Dsui_1446 -3.2 -3.4 succinyl-CoA synthetase, alpha subunit compare
Dsui_1578 -3.1 -6.6 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3523 -3.1 -9.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1582 -3.1 -4.6 Fe-S oxidoreductase compare
Dsui_1600 -3.0 -18.6 putative enzyme of heme biosynthesis compare
Dsui_2433 -3.0 -14.0 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0033 -3.0 -2.0 Zn-dependent protease with chaperone function compare
Dsui_0023 -3.0 -2.0 acetylornithine/succinylornithine aminotransferase compare
Dsui_1002 -3.0 -1.7 prolyl oligopeptidase family protein compare
Dsui_0174 -3.0 -2.0 hypothetical protein compare
Dsui_2893 -2.9 -2.0 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2717 -2.9 -4.4 RNA polymerase-binding protein DksA compare
Dsui_0870 -2.8 -14.7 putative membrane protein compare
Dsui_2920 -2.8 -2.5 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_1674 -2.8 -1.9 EAL domain-containing protein compare
Dsui_3524 -2.8 -11.3 signal transduction histidine kinase compare
Dsui_1978 -2.7 -2.1 putative lipoprotein compare
Dsui_1819 -2.7 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1045 -2.7 -1.8 hypothetical protein compare
Dsui_1852 -2.6 -1.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1893 -2.6 -1.5 putative membrane protein compare
Dsui_1408 -2.5 -0.8 NifZ domain-containing protein compare
Dsui_0417 -2.5 -1.7 gamma-glutamyltransferase compare
Dsui_0171 -2.5 -1.7 putative transcriptional regulator compare
Dsui_0568 -2.5 -4.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1242 -2.4 -1.7 hypothetical protein compare
Dsui_1619 -2.4 -1.6 putative membrane-associated, metal-dependent hydrolase compare
Dsui_1825 -2.4 -1.6 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_3448 -2.4 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2330 -2.4 -1.6 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_1884 -2.3 -2.7 histidine kinase compare
Dsui_0487 -2.3 -1.5 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1445 -2.3 -3.1 succinyl-CoA synthetase, beta subunit compare
Dsui_2443 -2.3 -2.9 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_1396 -2.3 -1.6 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_1097 -2.3 -9.6 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_1620 -2.2 -1.5 PAP2 (acid phosphatase) superfamily protein compare
Dsui_3240 -2.2 -7.9 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_1096 -2.2 -16.1 glutamate synthase family protein compare
Dsui_2027 -2.2 -1.5 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_2921 -2.2 -2.5 isochorismate synthase family protein compare
Dsui_0116 -2.2 -1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_1297 -2.2 -7.0 biotin synthetase compare
Dsui_3231 -2.1 -1.5 hypothetical protein compare
Dsui_1857 -2.1 -1.3 putative permease, DMT superfamily compare
Dsui_3478 -2.1 -1.0 hypothetical protein compare
Dsui_2342 -2.1 -1.4 multidrug resistance efflux pump compare
Dsui_2534 -2.1 -3.9 TRAP transporter, DctM subunit compare
Dsui_2877 -2.1 -2.5 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_3026 -2.1 -1.2 hydrogenase maturation protease compare
Dsui_3426 -2.1 -1.4 transcriptional regulator compare
Dsui_3006 -2.1 -1.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_1669 -2.1 -1.4 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_1442 -2.1 -1.4 putative efflux protein, MATE family compare
Dsui_1402 -2.1 -5.2 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_2866 -2.1 -1.4 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_2518 -2.1 -2.0 hypothetical protein compare
Dsui_3114 -2.1 -1.3 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_0618 -2.1 -1.4 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_3115 -2.1 -0.9 hypothetical protein compare
Dsui_0209 -2.0 -1.4 hypothetical protein compare
Dsui_3117 -2.0 -1.3 hypothetical protein compare
Dsui_0253 -2.0 -1.3 HIRAN domain-containing protein compare
Dsui_1311 -1.9 -1.2 hypothetical protein compare
Dsui_0966 -1.9 -2.8 methyl-accepting chemotaxis protein compare
Dsui_1490 -1.9 -2.2 DNA-binding protein, excisionase family compare
Dsui_0945 -1.9 -1.0 Iron-sulfur cluster assembly accessory protein compare
Dsui_3298 -1.9 -12.9 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1165 -1.9 -1.3 Ni,Fe-hydrogenase I large subunit compare
Dsui_1149 -1.9 -1.3 Zn-dependent protease with chaperone function compare
Dsui_3392 -1.9 -10.3 carboxylate-amine ligase, YbdK family compare
Dsui_2352 -1.9 -1.3 hypothetical protein compare
Dsui_1659 -1.9 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_3077 -1.9 -1.8 hypothetical protein compare
Dsui_2687 -1.9 -5.2 RIP metalloprotease RseP compare
Dsui_3125 -1.9 -1.8 cytochrome c, mono- and diheme variants family compare
Dsui_3465 -1.8 -2.7 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_1368 -1.8 -1.7 hypothetical protein compare
Dsui_0532 -1.8 -1.2 cob(I)alamin adenosyltransferase compare
Dsui_0975 -1.8 -1.2 acyl-CoA dehydrogenase compare
Dsui_1403 -1.8 -2.6 putative NTP binding protein (contains STAS domain) compare
Dsui_1296 -1.8 -1.2 putative amidophosphoribosyltransferase compare
Dsui_2312 -1.8 -1.2 3-hydroxybutyrate dehydrogenase compare
Dsui_3377 -1.8 -1.2 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_1660 -1.8 -1.7 outer membrane cobalamin receptor protein compare
Dsui_3393 -1.8 -5.8 Kef-type K+ transport system, membrane component compare
Dsui_0477 -1.8 -3.1 tol-pal system protein YbgF compare
Dsui_0558 -1.8 -1.2 tetratricopeptide repeat protein compare
Dsui_3366 -1.8 -1.7 glycerophosphoryl diester phosphodiesterase compare
Dsui_3158 -1.8 -3.6 Na+/H+ dicarboxylate symporter compare
Dsui_2762 -1.8 -0.8 Protein of unknown function (DUF3617) compare
Dsui_1198 -1.8 -4.2 apolipoprotein N-acyltransferase compare
Dsui_0620 -1.8 -1.2 Fe2+-dicitrate sensor, membrane component compare
Dsui_2339 -1.8 -1.2 putative domain HDIG-containing protein compare
Dsui_1701 -1.8 -1.2 restriction endonuclease compare
Dsui_2975 -1.8 -1.2 TonB-dependent siderophore receptor compare
Dsui_3521 -1.8 -10.0 membrane-fusion protein compare
Dsui_0510 -1.8 -1.2 ferredoxin-type protein, NapH/MauN family compare
Dsui_0733 -1.8 -1.2 hypothetical protein compare
Dsui_1605 -1.8 -1.2 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0691 -1.7 -0.9 hypothetical protein compare
Dsui_2424 -1.7 -0.5 hypothetical protein compare
Dsui_1104 -1.7 -1.2 putative thioesterase compare
Dsui_0173 -1.7 -1.2 site-specific DNA methylase compare
Dsui_3520 -1.7 -14.5 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1855 -1.7 -1.1 hypothetical protein compare
Dsui_0553 -1.7 -1.1 putative nitrogen fixation protein compare
Dsui_0513 -1.7 -2.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1433 -1.7 -0.8 chemotaxis protein compare
Dsui_0436 -1.7 -1.2 dienelactone hydrolase-like enzyme compare
Dsui_3259 -1.7 -1.2 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_1840 -1.7 -1.2 hypothetical protein compare
Dsui_2882 -1.7 -8.4 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2080 -1.7 -1.1 response regulator compare
Dsui_2127 -1.7 -0.9 flavodoxin reductase family protein compare
Dsui_3441 -1.7 -1.2 cation/multidrug efflux pump compare
Dsui_3408 -1.7 -1.9 hypothetical protein compare
Dsui_2228 -1.7 -1.1 Zn-dependent alcohol dehydrogenase compare
Dsui_0897 -1.7 -1.1 RND family efflux transporter, MFP subunit compare
Dsui_0765 -1.7 -1.6 conserved hypothetical protein, proteobacterial compare
Dsui_1888 -1.7 -1.1 putative domain HDIG-containing protein compare
Dsui_3318 -1.7 -1.2 cytochrome c, mono- and diheme variants family compare
Dsui_2741 -1.7 -1.1 PAS domain S-box compare
Dsui_2970 -1.7 -1.3 putative Fe-S oxidoreductase compare
Dsui_0692 -1.7 -2.9 hypothetical protein compare
Dsui_0176 -1.7 -1.1 ribosome modulation factor compare
Dsui_2935 -1.7 -1.1 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1454 -1.7 -0.9 Rhodanese-like protein,cyclic nucleotide-binding protein compare
Dsui_3351 -1.7 -1.1 cytochrome c peroxidase compare
Dsui_2883 -1.6 -6.4 biotin biosynthesis protein BioC compare
Dsui_0871 -1.6 -0.5 hypothetical protein compare
Dsui_1675 -1.6 -1.0 hypothetical protein compare
Dsui_0271 -1.6 -1.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1559 -1.6 -1.1 hypothetical protein compare
Dsui_2341 -1.6 -1.1 ABC-type multidrug transport system, ATPase component compare
Dsui_3469 -1.6 -1.8 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_3274 -1.6 -1.1 dihydrodipicolinate reductase compare
Dsui_2881 -1.6 -8.0 8-amino-7-oxononanoate synthase compare
Dsui_2429 -1.6 -1.1 putative permease compare
Dsui_0105 -1.6 -2.6 NAD-dependent aldehyde dehydrogenase compare
Dsui_1739 -1.6 -1.1 flagellar basal-body P-ring protein compare
Dsui_0653 -1.6 -1.1 putative SAM-dependent methyltransferase compare
Dsui_3477 -1.6 -1.1 PAS domain S-box compare
Dsui_3099 -1.6 -1.8 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_2440 -1.6 -7.8 ClpP class periplasmic serine protease compare
Dsui_2951 -1.6 -1.1 putative iron-regulated membrane protein compare
Dsui_3008 -1.6 -1.1 hydrogenase expression/formation protein compare
Dsui_1133 -1.6 -1.5 hypothetical protein compare
Dsui_2705 -1.6 -1.8 permease compare
Dsui_2809 -1.6 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_2662 -1.6 -3.2 hypothetical protein compare
Dsui_1640 -1.6 -1.0 hypothetical protein compare
Dsui_3238 -1.6 -2.9 PAS domain S-box compare
Dsui_1817 -1.6 -1.1 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_1111 -1.6 -1.1 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_2919 -1.6 -1.0 addiction module antidote protein, HigA family compare
Dsui_2237 -1.6 -1.8 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_2033 -1.6 -1.1 transcriptional regulator compare
Dsui_3120 -1.6 -1.0 cAMP-binding protein compare
Dsui_2295 -1.6 -0.8 transcriptional regulator compare
Dsui_3178 -1.6 -1.5 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_3157 -1.6 -1.1 Fatty acid cis/trans isomerase (CTI) compare
Dsui_2457 -1.6 -8.5 GTP-binding protein LepA compare
Dsui_3151 -1.6 -0.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2884 -1.6 -7.1 dethiobiotin synthase compare
Dsui_1044 -1.5 -1.1 hypothetical protein compare
Dsui_0029 -1.5 -1.0 putative pyrophosphatase compare
Dsui_1275 -1.5 -4.1 protein-export chaperone SecB compare
Dsui_0756 -1.5 -9.7 hypothetical protein compare
Dsui_1642 -1.5 -4.3 hypothetical protein compare
Dsui_1000 -1.5 -1.0 hypothetical protein compare
Dsui_2880 -1.5 -7.5 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_0225 -1.5 -1.0 hypothetical protein compare
Dsui_2740 -1.5 -1.0 putative integral membrane protein compare
Dsui_2329 -1.5 -1.0 putative dehydrogenase compare
Dsui_1370 -1.5 -1.4 putative permease, DMT superfamily compare
Dsui_1388 -1.5 -1.0 hypothetical protein compare
Dsui_1671 -1.5 -3.2 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_1670 -1.5 -1.0 cytochrome c peroxidase compare
Dsui_3105 -1.5 -8.1 CBS domain-containing protein compare
Dsui_1010 -1.5 -2.6 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_3443 -1.5 -1.0 RND family efflux transporter, MFP subunit compare
Dsui_1676 -1.5 -1.0 biopolymer transport protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium L-Lactate across organisms