Experiment set6IT043 for Dechlorosoma suillum PS

Compare to:

Sodium L-Lactate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Dsui_0068 +1.2 12.0 methyltransferase family protein compare
Dsui_0460 +1.2 4.4 ADP-heptose:LPS heptosyltransferase compare
Dsui_1609 +1.2 1.3 Thiopurine S-methyltransferase (TPMT) compare
Dsui_2756 +1.1 1.3 hypothetical protein compare
Dsui_2891 +1.1 0.5 hemerythrin-like metal-binding domain-containing protein compare
Dsui_0076 +1.1 9.7 acetyltransferase, ribosomal protein N-acetylase compare
Dsui_2590 +1.1 2.2 Pilin accessory protein (PilO) compare
Dsui_3028 +1.0 0.5 coenzyme F420-reducing hydrogenase, gamma subunit compare
Dsui_2496 +1.0 0.4 Membrane transport protein MerF compare
Dsui_2599 +1.0 0.4 hypothetical protein compare
Dsui_2611 +1.0 0.5 hypothetical protein compare
Dsui_1976 +1.0 7.1 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_0461 +1.0 5.9 glycosyltransferase compare
Dsui_0066 +1.0 9.5 glycosyl transferase compare
Dsui_0071 +1.0 7.4 dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme compare
Dsui_0074 +0.9 8.7 hypothetical protein compare
Dsui_0084 +0.9 7.7 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain compare
Dsui_1891 +0.9 0.5 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_0067 +0.9 9.1 cephalosporin hydroxylase compare
Dsui_1873 +0.9 7.9 transcriptional regulator compare
Dsui_0077 +0.9 7.2 putative PLP-dependent enzyme possibly involved in cell wall biogenesis compare
Dsui_3445 +0.9 6.1 hypothetical protein compare
Dsui_0081 +0.9 7.7 pseudaminic acid CMP-transferase compare
Dsui_0080 +0.9 7.1 pseudaminic acid biosynthesis-associated protein PseG compare
Dsui_0078 +0.9 6.7 putative dehydrogenase compare
Dsui_0060 +0.9 6.5 GDP-D-mannose dehydratase compare
Dsui_2331 +0.9 3.5 heat shock protein compare
Dsui_0061 +0.9 7.0 glycosyltransferase compare
Dsui_0083 +0.9 6.8 UDP-N-acetylglucosamine 4,6-dehydratase compare
Dsui_0072 +0.9 7.5 CDP-glucose 4,6-dehydratase compare
Dsui_1291 +0.9 6.5 hypothetical protein compare
Dsui_1553 +0.9 0.9 regulator of competence-specific genes compare
Dsui_1827 +0.9 2.7 hypothetical protein compare
Dsui_0070 +0.9 7.9 methyltransferase family protein compare
Dsui_0400 +0.8 4.9 putative nucleoside-diphosphate sugar epimerase compare
Dsui_1946 +0.8 6.3 putative N-acetylglucosaminyl transferase compare
Dsui_0057 +0.8 5.6 glycosyltransferase compare
Dsui_3446 +0.8 4.0 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase compare
Dsui_0998 +0.8 2.9 A/G-specific adenine glycosylase compare
Dsui_2609 +0.8 0.5 hypothetical protein compare
Dsui_0069 +0.8 7.5 nucleoside-diphosphate-sugar epimerase compare
Dsui_1285 +0.8 6.0 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_1279 +0.8 6.5 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_1283 +0.8 3.1 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2188 +0.8 5.8 Protein of unknown function (DUF3460) compare
Dsui_0075 +0.8 6.3 hypothetical protein compare
Dsui_2383 +0.8 0.5 hypothetical protein compare
Dsui_0079 +0.8 7.2 pseudaminic acid synthase compare
Dsui_1289 +0.8 5.7 hypothetical protein compare
Dsui_1110 +0.8 0.4 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_2304 +0.8 4.0 electron transfer flavoprotein, alpha subunit compare
Dsui_1280 +0.8 6.1 type II secretory pathway, component PulF compare
Dsui_2221 +0.8 5.4 putative ATPase compare
Dsui_0073 +0.8 6.8 glucose-1-phosphate cytidylyltransferase compare
Dsui_0058 +0.7 4.1 Glycosyl transferase family 11 compare
Dsui_2042 +0.7 0.5 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_1058 +0.7 1.9 hypothetical protein compare
Dsui_2003 +0.7 5.5 acetate--CoA ligase compare
Dsui_1292 +0.7 5.3 MSHA-type pilus biogenesis protein MshL compare
Dsui_1284 +0.7 5.0 hypothetical protein compare
Dsui_2151 +0.7 3.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_3444 +0.7 4.4 phospho-2-dehydro-3-deoxyheptonate aldolase compare
Dsui_2600 +0.7 0.6 hypothetical protein compare
Dsui_1112 +0.7 0.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2641 +0.7 0.9 putative multicopper oxidase compare
Dsui_2555 +0.7 0.4 Bacteriophage coat protein B compare
Dsui_1286 +0.7 4.3 hypothetical protein compare
Dsui_2286 +0.7 0.4 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_0796 +0.7 2.7 hypothetical protein compare
Dsui_2573 +0.7 1.9 hypothetical protein compare
Dsui_0462 +0.7 2.7 ADP-heptose:LPS heptosyltransferase compare
Dsui_1288 +0.7 4.7 hypothetical protein compare
Dsui_1293 +0.7 3.6 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_1995 +0.7 5.0 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_3495 +0.7 1.6 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0398 +0.7 3.5 UDP-glucose-4-epimerase compare
Dsui_2060 +0.6 2.0 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_1862 +0.6 2.5 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_1668 +0.6 0.7 alpha-hydroxyacid dehydrogenase, FMN-dependent L-lactate dehydrogenase compare
Dsui_1138 +0.6 0.8 hypothetical protein compare
Dsui_0215 +0.6 0.3 hypothetical protein compare
Dsui_1480 +0.6 0.7 hypothetical protein compare
Dsui_2066 +0.6 4.5 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Dsui_2812 +0.6 1.0 conserved hypothetical integral membrane protein compare
Dsui_2059 +0.6 3.6 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_2842 +0.6 0.4 radical SAM pair-associated protein compare
Dsui_1287 +0.6 5.4 hypothetical protein compare
Dsui_2853 +0.6 0.4 PPIC-type PPIASE family protein compare
Dsui_2972 +0.6 3.1 leucyl/phenylalanyl-tRNA--protein transferase compare
Dsui_2068 +0.6 4.2 ABC-type metal ion transport system, ATPase component compare
Dsui_1956 +0.6 4.4 Rhodanese-related sulfurtransferase compare
Dsui_3415 +0.6 4.5 FAD/FMN-dependent dehydrogenase compare
Dsui_1495 +0.6 0.3 molecular chaperone (small heat shock protein) compare
Dsui_3090 +0.6 2.9 hypothetical protein compare
Dsui_1908 +0.6 4.3 putative Fe-S-cluster redox enzyme compare
Dsui_2061 +0.6 4.8 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0059 +0.6 3.2 glycosyl transferase compare
Dsui_0956 +0.6 0.4 nitrogenase molybdenum-iron protein alpha chain compare
Dsui_3484 +0.6 1.2 putative permease compare
Dsui_1911 +0.6 3.6 ParB-like partition protein compare
Dsui_2064 +0.6 0.6 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Dsui_1937 +0.6 4.3 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_1005 +0.6 2.4 tRNA-Gly compare
Dsui_0228 +0.6 3.2 metalloendopeptidase-like membrane protein compare
Dsui_0704 +0.6 4.3 RNA polymerase sigma-54 factor compare
Dsui_3414 +0.6 4.3 FAD/FMN-dependent dehydrogenase compare
Dsui_1281 +0.5 4.0 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2826 +0.5 1.0 hypothetical protein compare
Dsui_1690 +0.5 3.0 cAMP-binding protein compare
Dsui_1971 +0.5 3.9 RNA polymerase sigma factor RpoS compare
Dsui_1987 +0.5 4.4 putative permease compare
Dsui_2131 +0.5 3.8 tRNA-Arg compare
Dsui_2004 +0.5 0.4 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_2069 +0.5 2.6 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2152 +0.5 2.8 molybdenum cofactor synthesis domain protein compare
Dsui_2696 +0.5 3.8 (protein-PII) uridylyltransferase compare
Dsui_2000 +0.5 2.8 hypothetical protein compare
Dsui_2159 +0.5 3.6 methyl-accepting chemotaxis protein compare
Dsui_1926 +0.5 1.1 acetolactate synthase, small (regulatory) subunit compare
Dsui_0056 +0.5 3.1 glycosyl transferase compare
Dsui_1290 +0.5 2.2 hypothetical protein compare
Dsui_2499 +0.5 0.3 MerE protein compare
Dsui_3102 +0.5 0.9 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_0658 +0.5 2.9 chemotaxis signal transduction protein compare
Dsui_2057 +0.5 3.0 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_1869 +0.5 3.7 hypothetical protein compare
Dsui_1294 +0.5 3.6 hypothetical protein compare
Dsui_1902 +0.5 3.7 alkyl hydroperoxide reductase, F subunit compare
Dsui_2958 +0.5 2.0 cobalt transport protein ATP-binding subunit compare
Dsui_2606 +0.5 0.3 soluble lytic murein transglycosylase-like protein compare
Dsui_2023 +0.5 3.6 transcriptional regulator compare
Dsui_0266 +0.5 2.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0977 +0.5 1.3 acyl-CoA dehydrogenase compare
Dsui_3383 +0.5 2.6 cAMP-binding protein compare
Dsui_1844 +0.5 0.3 phosphate transport regulator related to PhoU compare
Dsui_0290 +0.5 2.9 SSS sodium solute transporter compare
Dsui_2273 +0.5 0.3 TonB-dependent siderophore receptor compare
Dsui_2368 +0.5 3.7 serine O-acetyltransferase compare
Dsui_2067 +0.5 3.5 ABC-type metal ion transport system, permease component compare
Dsui_1460 +0.5 3.7 cAMP-binding protein compare
Dsui_1924 +0.5 4.2 ribonucleoside-diphosphate reductase, alpha subunit compare
Dsui_0192 +0.5 0.3 hypothetical protein compare
Dsui_0310 +0.5 1.9 acyl-CoA hydrolase compare
Dsui_2642 +0.5 0.3 outer membrane protein compare
Dsui_2098 +0.5 1.2 hypothetical protein compare
Dsui_3207 +0.5 0.7 ankyrin repeat-containing protein compare
Dsui_2039 +0.5 2.8 OAH/OAS sulfhydrylase compare
Dsui_2256 +0.5 4.0 flavodoxin reductase family protein compare
Dsui_2235 +0.5 1.9 hypothetical protein compare
Dsui_0660 +0.5 3.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2183 +0.4 0.8 aldose 1-epimerase-like enzyme compare
Dsui_0470 +0.4 1.9 fructose-2,6-bisphosphatase compare
Dsui_1333 +0.4 3.9 Integral membrane protein CcmA involved in cell shape determination compare
Dsui_2608 +0.4 0.3 topoisomerase IA compare
Dsui_1093 +0.4 1.1 hypothetical protein compare
Dsui_3154 +0.4 3.2 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_2265 +0.4 0.9 DNA-directed DNA polymerase III PolC compare
Dsui_1393 +0.4 0.3 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0395 +0.4 1.1 outer membrane lipoprotein compare
Dsui_3413 +0.4 2.6 Fe-S oxidoreductase compare
Dsui_2393 +0.4 1.6 uncharacterized domain HDIG-containing protein compare
Dsui_3375 +0.4 1.0 hypothetical protein compare
Dsui_2040 +0.4 1.4 putative CoA-binding protein compare
Dsui_0899 +0.4 3.6 D-alanyl-D-alanine carboxypeptidase compare
Dsui_2544 +0.4 3.4 disulfide bond chaperone compare
Dsui_1012 +0.4 1.9 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_1457 +0.4 2.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2031 +0.4 0.2 putative thioesterase compare
Dsui_1858 +0.4 3.1 transcriptional regulator compare
Dsui_2058 +0.4 2.9 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_2926 +0.4 2.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2193 +0.4 2.0 squalene synthase HpnC compare
Dsui_3411 +0.4 2.4 hypothetical protein compare
Dsui_1050 +0.4 2.9 signal transduction histidine kinase, nitrogen specific compare
Dsui_2103 +0.4 3.1 hypothetical protein compare
Dsui_2831 +0.4 3.9 hypothetical protein compare
Dsui_0270 +0.4 1.0 transcriptional regulator compare
Dsui_1488 +0.4 0.3 putative metal-dependent hydrolase compare
Dsui_2048 +0.4 2.7 ATPase component of ABC transporters with duplicated ATPase domain compare
Dsui_1003 +0.4 3.2 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_1452 +0.4 1.3 putative transmembrane sensor domain protein compare
Dsui_3327 +0.4 1.7 cytochrome b compare
Dsui_1541 +0.4 2.8 cytochrome c553 compare
Dsui_2591 +0.4 0.5 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2504 +0.4 2.8 hypothetical protein compare
Dsui_1496 +0.4 1.1 YfdX protein compare
Dsui_2761 +0.4 1.8 hypothetical protein compare
Dsui_2224 +0.4 0.9 hypothetical protein compare
Dsui_2070 +0.4 2.0 transcriptional regulator compare
Dsui_0580 +0.4 2.1 ATP-dependent protease HslVU, ATPase subunit compare
Dsui_2998 +0.4 0.3 ABC-type phosphate/phosphonate transport system, periplasmic component compare
Dsui_0476 +0.4 1.2 organic radical activating enzyme compare
Dsui_0675 +0.4 1.1 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2639 +0.4 0.2 putative metal-binding protein compare
Dsui_2961 +0.4 1.0 precorrin isomerase compare
Dsui_0464 +0.4 2.0 hypothetical protein compare
Dsui_2592 +0.4 0.3 type II secretory pathway, component PulF compare
Dsui_2315 +0.4 2.5 Stress responsive A/B Barrel Domain-containing protein compare
Dsui_1933 +0.4 2.3 2-phosphoglycolate phosphatase compare
Dsui_1955 +0.4 1.6 3'-5' exonuclease compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium L-Lactate across organisms