Experiment set6IT042 for Dechlorosoma suillum PS

Compare to:

Sodium D-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -9.1 -7.8 phosphotransferase system HPr (HPr) family protein compare
Dsui_1581 -5.9 -3.4 response regulator compare
Dsui_0423 -5.8 -6.9 putative permease compare
Dsui_0742 -5.4 -11.1 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_2816 -5.2 -3.6 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3413 -4.6 -12.1 Fe-S oxidoreductase compare
Dsui_3139 -4.6 -3.1 outer membrane assembly lipoprotein YfgL compare
Dsui_1577 -4.5 -3.7 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_3414 -4.3 -22.2 FAD/FMN-dependent dehydrogenase compare
Dsui_3415 -4.2 -24.2 FAD/FMN-dependent dehydrogenase compare
Dsui_1978 -3.9 -2.1 putative lipoprotein compare
Dsui_0520 -3.7 -8.2 transcriptional regulator compare
Dsui_0025 -3.6 -2.4 hypothetical protein compare
Dsui_1445 -3.5 -3.4 succinyl-CoA synthetase, beta subunit compare
Dsui_2433 -3.4 -12.0 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_1576 -3.3 -3.0 dihydrolipoamide dehydrogenase compare
Dsui_1446 -3.3 -3.0 succinyl-CoA synthetase, alpha subunit compare
Dsui_2717 -3.2 -4.8 RNA polymerase-binding protein DksA compare
Dsui_1096 -3.2 -20.0 glutamate synthase family protein compare
Dsui_1599 -3.1 -20.0 putative enzyme of heme biosynthesis compare
Dsui_1578 -3.1 -6.5 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_0033 -3.0 -2.1 Zn-dependent protease with chaperone function compare
Dsui_0023 -3.0 -2.1 acetylornithine/succinylornithine aminotransferase compare
Dsui_1094 -3.0 -3.4 shikimate kinase compare
Dsui_0174 -3.0 -2.0 hypothetical protein compare
Dsui_1097 -3.0 -9.3 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_0870 -3.0 -16.1 putative membrane protein compare
Dsui_1884 -2.9 -2.0 histidine kinase compare
Dsui_1970 -2.9 -9.0 metalloendopeptidase-like membrane protein compare
Dsui_2327 -2.8 -1.9 putative toxin-antitoxin system toxin component, PIN family compare
Dsui_1600 -2.8 -11.6 putative enzyme of heme biosynthesis compare
Dsui_1674 -2.8 -1.9 EAL domain-containing protein compare
Dsui_1529 -2.7 -7.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2877 -2.6 -2.5 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_1819 -2.6 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1297 -2.6 -6.5 biotin synthetase compare
Dsui_1852 -2.5 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0417 -2.5 -1.7 gamma-glutamyltransferase compare
Dsui_1408 -2.5 -0.8 NifZ domain-containing protein compare
Dsui_1893 -2.5 -1.5 putative membrane protein compare
Dsui_1490 -2.5 -2.3 DNA-binding protein, excisionase family compare
Dsui_2325 -2.5 -1.7 hypothetical protein compare
Dsui_3523 -2.4 -8.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1045 -2.4 -2.3 hypothetical protein compare
Dsui_2330 -2.4 -1.6 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_1242 -2.4 -1.6 hypothetical protein compare
Dsui_3448 -2.4 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1619 -2.4 -1.6 putative membrane-associated, metal-dependent hydrolase compare
Dsui_1825 -2.4 -1.6 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_2881 -2.3 -11.5 8-amino-7-oxononanoate synthase compare
Dsui_0487 -2.3 -1.5 hemerythrin HHE cation binding domain-containing protein compare
Dsui_0477 -2.3 -3.8 tol-pal system protein YbgF compare
Dsui_3099 -2.3 -2.1 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_3524 -2.3 -6.9 signal transduction histidine kinase compare
Dsui_1394 -2.3 -3.0 hypothetical protein compare
Dsui_2027 -2.2 -1.5 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_1396 -2.2 -1.5 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_0116 -2.2 -1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_1620 -2.2 -1.5 PAP2 (acid phosphatase) superfamily protein compare
Dsui_2921 -2.2 -2.4 isochorismate synthase family protein compare
Dsui_2342 -2.2 -1.5 multidrug resistance efflux pump compare
Dsui_3231 -2.2 -1.5 hypothetical protein compare
Dsui_3298 -2.2 -12.5 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_3006 -2.2 -1.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_3026 -2.2 -1.2 hydrogenase maturation protease compare
Dsui_3114 -2.1 -1.4 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3115 -2.1 -1.0 hypothetical protein compare
Dsui_2884 -2.1 -9.1 dethiobiotin synthase compare
Dsui_0209 -2.1 -1.4 hypothetical protein compare
Dsui_1857 -2.1 -1.3 putative permease, DMT superfamily compare
Dsui_0725 -2.1 -4.1 putative hydrolase of the alpha/beta superfamily compare
Dsui_2880 -2.1 -11.0 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_1669 -2.1 -1.4 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0316 -2.1 -1.4 hypothetical protein compare
Dsui_1442 -2.1 -1.4 putative efflux protein, MATE family compare
Dsui_3117 -2.1 -1.4 hypothetical protein compare
Dsui_3366 -2.1 -1.4 glycerophosphoryl diester phosphodiesterase compare
Dsui_0253 -2.1 -1.4 HIRAN domain-containing protein compare
Dsui_3077 -2.0 -1.4 hypothetical protein compare
Dsui_3125 -2.0 -1.4 cytochrome c, mono- and diheme variants family compare
Dsui_0105 -2.0 -2.7 NAD-dependent aldehyde dehydrogenase compare
Dsui_2321 -2.0 -1.4 site-specific recombinase compare
Dsui_0618 -2.0 -1.4 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_2866 -2.0 -1.4 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_3240 -2.0 -10.2 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_3295 -2.0 -7.3 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_2443 -2.0 -2.4 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0003 -2.0 -5.4 putative Zn-dependent protease compare
Dsui_2397 -2.0 -3.5 cAMP-binding protein compare
Dsui_2663 -2.0 -2.1 hypothetical protein compare
Dsui_3178 -2.0 -1.3 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_2991 -2.0 -2.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1660 -2.0 -1.3 outer membrane cobalamin receptor protein compare
Dsui_2882 -2.0 -9.8 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_3393 -2.0 -7.6 Kef-type K+ transport system, membrane component compare
Dsui_0945 -1.9 -1.1 Iron-sulfur cluster assembly accessory protein compare
Dsui_1368 -1.9 -1.3 hypothetical protein compare
Dsui_1311 -1.9 -1.3 hypothetical protein compare
Dsui_1179 -1.9 -2.0 ribosome-associated heat shock protein implicated in recycling of 50S subunit compare
Dsui_2352 -1.9 -1.3 hypothetical protein compare
Dsui_1165 -1.9 -1.3 Ni,Fe-hydrogenase I large subunit compare
Dsui_2903 -1.9 -2.2 methyltransferase family protein compare
Dsui_3392 -1.9 -12.6 carboxylate-amine ligase, YbdK family compare
Dsui_1149 -1.9 -1.3 Zn-dependent protease with chaperone function compare
Dsui_1618 -1.9 -1.3 signal transduction histidine kinase compare
Dsui_2312 -1.8 -1.2 3-hydroxybutyrate dehydrogenase compare
Dsui_2975 -1.8 -1.3 TonB-dependent siderophore receptor compare
Dsui_2893 -1.8 -2.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3229 -1.8 -2.0 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_3426 -1.8 -1.7 transcriptional regulator compare
Dsui_0171 -1.8 -1.7 putative transcriptional regulator compare
Dsui_1296 -1.8 -1.2 putative amidophosphoribosyltransferase compare
Dsui_3377 -1.8 -1.2 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2294 -1.8 -1.2 phasin family protein compare
Dsui_2339 -1.8 -1.2 putative domain HDIG-containing protein compare
Dsui_2228 -1.8 -1.2 Zn-dependent alcohol dehydrogenase compare
Dsui_0968 -1.8 -1.9 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_2883 -1.8 -6.7 biotin biosynthesis protein BioC compare
Dsui_0431 -1.8 -2.1 putative permease, DMT superfamily compare
Dsui_3404 -1.8 -1.2 glutamine synthetase adenylyltransferase compare
Dsui_0173 -1.8 -1.2 site-specific DNA methylase compare
Dsui_0436 -1.8 -1.2 dienelactone hydrolase-like enzyme compare
Dsui_0691 -1.7 -1.0 hypothetical protein compare
Dsui_0392 -1.7 -1.2 diacylglycerol kinase compare
Dsui_0765 -1.7 -1.2 conserved hypothetical protein, proteobacterial compare
Dsui_1701 -1.7 -1.2 restriction endonuclease compare
Dsui_0733 -1.7 -1.2 hypothetical protein compare
Dsui_0176 -1.7 -1.2 ribosome modulation factor compare
Dsui_1605 -1.7 -1.2 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_1370 -1.7 -1.2 putative permease, DMT superfamily compare
Dsui_0620 -1.7 -1.2 Fe2+-dicitrate sensor, membrane component compare
Dsui_3259 -1.7 -1.2 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_2673 -1.7 -4.1 hypothetical protein compare
Dsui_2127 -1.7 -1.0 flavodoxin reductase family protein compare
Dsui_2772 -1.7 -1.5 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_0533 -1.7 -1.1 cobyrinic acid a,c-diamide synthase compare
Dsui_0871 -1.7 -0.5 hypothetical protein compare
Dsui_1433 -1.7 -0.8 chemotaxis protein compare
Dsui_1302 -1.7 -2.5 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1104 -1.7 -1.1 putative thioesterase compare
Dsui_0553 -1.7 -1.1 putative nitrogen fixation protein compare
Dsui_3441 -1.7 -1.2 cation/multidrug efflux pump compare
Dsui_2935 -1.7 -1.1 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1840 -1.7 -1.1 hypothetical protein compare
Dsui_2080 -1.7 -1.1 response regulator compare
Dsui_0454 -1.7 -3.8 hypothetical protein compare
Dsui_2341 -1.7 -1.1 ABC-type multidrug transport system, ATPase component compare
Dsui_1402 -1.7 -4.7 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_0306 -1.7 -1.1 putative permease compare
Dsui_2195 -1.7 -10.9 trigger factor compare
Dsui_3465 -1.7 -2.6 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_3351 -1.7 -1.1 cytochrome c peroxidase compare
Dsui_1855 -1.7 -1.1 hypothetical protein compare
Dsui_1641 -1.6 -3.3 SirA-like protein compare
Dsui_3274 -1.6 -1.1 dihydrodipicolinate reductase compare
Dsui_3008 -1.6 -1.1 hydrogenase expression/formation protein compare
Dsui_0225 -1.6 -1.1 hypothetical protein compare
Dsui_2384 -1.6 -1.1 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1675 -1.6 -1.0 hypothetical protein compare
Dsui_2741 -1.6 -1.1 PAS domain S-box compare
Dsui_2962 -1.6 -3.5 cobalamin biosynthesis protein CbiD compare
Dsui_2349 -1.6 -1.1 Zn-dependent hydrolase, glyoxylase compare
Dsui_2429 -1.6 -1.1 putative permease compare
Dsui_1739 -1.6 -1.1 flagellar basal-body P-ring protein compare
Dsui_0200 -1.6 -1.0 hypothetical protein compare
Dsui_3469 -1.6 -1.8 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_3477 -1.6 -1.1 PAS domain S-box compare
Dsui_3151 -1.6 -0.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0029 -1.6 -1.1 putative pyrophosphatase compare
Dsui_1559 -1.6 -1.1 hypothetical protein compare
Dsui_3120 -1.6 -1.1 cAMP-binding protein compare
Dsui_2951 -1.6 -1.1 putative iron-regulated membrane protein compare
Dsui_3157 -1.6 -1.1 Fatty acid cis/trans isomerase (CTI) compare
Dsui_2454 -1.6 -5.9 Positive regulator of sigma E activity compare
Dsui_2920 -1.6 -2.1 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2033 -1.6 -1.1 transcriptional regulator compare
Dsui_1888 -1.6 -1.0 putative domain HDIG-containing protein compare
Dsui_3520 -1.6 -13.3 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1111 -1.6 -1.1 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_2919 -1.6 -1.0 addiction module antidote protein, HigA family compare
Dsui_2329 -1.6 -1.0 putative dehydrogenase compare
Dsui_1000 -1.6 -1.0 hypothetical protein compare
Dsui_3521 -1.6 -10.6 membrane-fusion protein compare
Dsui_2533 -1.6 -1.4 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_1817 -1.5 -1.1 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_3238 -1.5 -3.2 PAS domain S-box compare
Dsui_2809 -1.5 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_0203 -1.5 -0.7 hypothetical protein compare
Dsui_0756 -1.5 -8.7 hypothetical protein compare
Dsui_0838 -1.5 -1.0 hypothetical protein compare
Dsui_0969 -1.5 -1.0 putative AP superfamily protein compare
Dsui_2072 -1.5 -1.0 Pirin-related protein compare
Dsui_1388 -1.5 -1.0 hypothetical protein compare
Dsui_0954 -1.5 -1.0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_0866 -1.5 -3.6 hypothetical protein compare
Dsui_3361 -1.5 -1.0 hypothetical protein compare
Dsui_3149 -1.5 -1.0 electron transfer flavoprotein, alpha subunit compare
Dsui_3094 -1.5 -1.0 putative HD superfamily hydrolase compare
Dsui_1403 -1.5 -2.3 putative NTP binding protein (contains STAS domain) compare
Dsui_3105 -1.5 -10.6 CBS domain-containing protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium D-Lactate across organisms