Experiment set6IT041 for Dechlorosoma suillum PS

Compare to:

a-Ketoglutaric acid disodium salt hydrate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -9.3 -7.5 phosphotransferase system HPr (HPr) family protein compare
Dsui_2717 -6.0 -4.1 RNA polymerase-binding protein DksA compare
Dsui_1970 -5.9 -5.7 metalloendopeptidase-like membrane protein compare
Dsui_0423 -5.7 -5.5 putative permease compare
Dsui_2816 -5.2 -3.6 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0742 -5.0 -9.3 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0704 -4.8 -23.3 RNA polymerase sigma-54 factor compare
Dsui_1529 -4.6 -4.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3523 -4.4 -6.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3139 -4.4 -3.0 outer membrane assembly lipoprotein YfgL compare
Dsui_3524 -4.2 -9.0 signal transduction histidine kinase compare
Dsui_1402 -4.0 -6.1 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1978 -3.8 -2.2 putative lipoprotein compare
Dsui_2651 -3.4 -2.1 ankyrin repeat-containing protein compare
Dsui_3521 -3.4 -17.9 membrane-fusion protein compare
Dsui_0025 -3.3 -2.2 hypothetical protein compare
Dsui_1399 -3.3 -11.1 conserved hypothetical integral membrane protein compare
Dsui_3520 -3.1 -21.6 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1446 -3.1 -2.9 succinyl-CoA synthetase, alpha subunit compare
Dsui_0520 -3.1 -14.7 transcriptional regulator compare
Dsui_1403 -3.0 -3.2 putative NTP binding protein (contains STAS domain) compare
Dsui_1599 -3.0 -14.6 putative enzyme of heme biosynthesis compare
Dsui_3230 -2.8 -2.7 hypothetical protein compare
Dsui_3229 -2.7 -1.8 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_0023 -2.7 -1.9 acetylornithine/succinylornithine aminotransferase compare
Dsui_0174 -2.7 -1.8 hypothetical protein compare
Dsui_0870 -2.7 -13.0 putative membrane protein compare
Dsui_1400 -2.6 -11.4 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_1969 -2.6 -14.2 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_1445 -2.6 -3.8 succinyl-CoA synthetase, beta subunit compare
Dsui_1819 -2.5 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_3099 -2.5 -1.7 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_1674 -2.5 -1.7 EAL domain-containing protein compare
Dsui_1398 -2.5 -4.1 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_0968 -2.5 -2.4 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_2772 -2.5 -1.7 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_1401 -2.5 -7.9 surface lipoprotein compare
Dsui_1580 -2.5 -9.1 PAS domain S-box compare
Dsui_2893 -2.5 -2.9 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3298 -2.4 -13.3 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1600 -2.4 -12.4 putative enzyme of heme biosynthesis compare
Dsui_1852 -2.4 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1893 -2.4 -1.5 putative membrane protein compare
Dsui_1408 -2.4 -0.8 NifZ domain-containing protein compare
Dsui_1947 -2.4 -3.3 nucleotide sugar dehydrogenase compare
Dsui_1198 -2.3 -6.0 apolipoprotein N-acyltransferase compare
Dsui_0417 -2.3 -1.5 gamma-glutamyltransferase compare
Dsui_0171 -2.3 -1.5 putative transcriptional regulator compare
Dsui_0003 -2.2 -5.4 putative Zn-dependent protease compare
Dsui_1045 -2.2 -2.1 hypothetical protein compare
Dsui_1825 -2.2 -1.5 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_1242 -2.2 -1.5 hypothetical protein compare
Dsui_1641 -2.2 -3.2 SirA-like protein compare
Dsui_1577 -2.2 -2.5 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1015 -2.1 -4.3 hypothetical protein compare
Dsui_2027 -2.1 -1.4 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_1619 -2.1 -1.5 putative membrane-associated, metal-dependent hydrolase compare
Dsui_2330 -2.1 -1.4 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_0966 -2.1 -2.0 methyl-accepting chemotaxis protein compare
Dsui_3465 -2.1 -1.4 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_0487 -2.1 -1.4 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1321 -2.1 -7.5 ABC-type uncharacterized transport system, permease component compare
Dsui_3006 -2.1 -1.1 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_2997 -2.0 -1.3 hypothetical protein compare
Dsui_1396 -2.0 -1.4 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_3469 -2.0 -1.3 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_1620 -2.0 -1.3 PAP2 (acid phosphatase) superfamily protein compare
Dsui_3026 -2.0 -1.2 hydrogenase maturation protease compare
Dsui_2866 -2.0 -1.3 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_3478 -2.0 -1.0 hypothetical protein compare
Dsui_1578 -2.0 -6.6 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3115 -1.9 -1.0 hypothetical protein compare
Dsui_1857 -1.9 -1.3 putative permease, DMT superfamily compare
Dsui_1992 -1.9 -4.3 ribosomal protein L9 compare
Dsui_0116 -1.9 -1.3 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_3531 -1.9 -3.6 Protein of unknown function (DUF3619) compare
Dsui_2342 -1.9 -1.3 multidrug resistance efflux pump compare
Dsui_3240 -1.9 -6.1 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0477 -1.9 -4.3 tol-pal system protein YbgF compare
Dsui_1031 -1.9 -1.3 formamidopyrimidine-DNA glycosylase Fpg compare
Dsui_0866 -1.9 -3.5 hypothetical protein compare
Dsui_3114 -1.9 -1.3 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_2433 -1.9 -11.1 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_2920 -1.9 -2.4 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_1442 -1.8 -1.2 putative efflux protein, MATE family compare
Dsui_1061 -1.8 -14.1 membrane-bound lytic murein transglycosylase compare
Dsui_2518 -1.8 -1.7 hypothetical protein compare
Dsui_3392 -1.8 -12.1 carboxylate-amine ligase, YbdK family compare
Dsui_3077 -1.8 -1.2 hypothetical protein compare
Dsui_0316 -1.8 -1.2 hypothetical protein compare
Dsui_0543 -1.8 -9.8 malic enzyme compare
Dsui_1669 -1.8 -1.2 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_3117 -1.8 -1.2 hypothetical protein compare
Dsui_3231 -1.8 -1.7 hypothetical protein compare
Dsui_0513 -1.8 -2.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2903 -1.8 -2.3 methyltransferase family protein compare
Dsui_3366 -1.8 -1.2 glycerophosphoryl diester phosphodiesterase compare
Dsui_0683 -1.8 -11.8 soluble lytic murein transglycosylase-like protein compare
Dsui_0209 -1.8 -1.2 hypothetical protein compare
Dsui_0253 -1.7 -1.2 HIRAN domain-containing protein compare
Dsui_0105 -1.7 -2.3 NAD-dependent aldehyde dehydrogenase compare
Dsui_1490 -1.7 -2.0 DNA-binding protein, excisionase family compare
Dsui_3393 -1.7 -5.5 Kef-type K+ transport system, membrane component compare
Dsui_1166 -1.7 -1.6 cytochrome c peroxidase compare
Dsui_1311 -1.7 -1.1 hypothetical protein compare
Dsui_2822 -1.7 -1.0 hypothetical protein compare
Dsui_0945 -1.7 -1.0 Iron-sulfur cluster assembly accessory protein compare
Dsui_0650 -1.7 -5.2 hypothetical protein compare
Dsui_1368 -1.7 -1.2 hypothetical protein compare
Dsui_3178 -1.7 -1.1 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1523 -1.7 -1.1 drug resistance transporter, EmrB/QacA subfamily compare
Dsui_1660 -1.7 -1.1 outer membrane cobalamin receptor protein compare
Dsui_3270 -1.7 -2.2 2'-5' RNA ligase compare
Dsui_1165 -1.7 -1.1 Ni,Fe-hydrogenase I large subunit compare
Dsui_1884 -1.7 -2.1 histidine kinase compare
Dsui_1149 -1.7 -1.1 Zn-dependent protease with chaperone function compare
Dsui_1759 -1.7 -4.8 flagellar hook-basal body complex protein FliE compare
Dsui_3522 -1.6 -6.5 outer membrane protein compare
Dsui_0297 -1.6 -1.5 sugar fermentation stimulation protein compare
Dsui_1925 -1.6 -2.7 acetolactate synthase, large subunit, biosynthetic type compare
Dsui_3125 -1.6 -1.9 cytochrome c, mono- and diheme variants family compare
Dsui_2807 -1.6 -2.6 enoyl-CoA hydratase/carnithine racemase compare
Dsui_2809 -1.6 -0.6 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_2747 -1.6 -3.0 uncharacterized integral membrane protein compare
Dsui_2352 -1.6 -1.1 hypothetical protein compare
Dsui_1618 -1.6 -1.1 signal transduction histidine kinase compare
Dsui_3448 -1.6 -1.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0618 -1.6 -1.5 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_1296 -1.6 -1.1 putative amidophosphoribosyltransferase compare
Dsui_2895 -1.6 -1.1 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_2975 -1.6 -1.1 TonB-dependent siderophore receptor compare
Dsui_1589 -1.6 -4.2 Nucleoside-diphosphate-sugar pyrophosphorylase family protein compare
Dsui_1659 -1.6 -1.1 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_3160 -1.6 -6.3 response regulator compare
Dsui_0431 -1.6 -1.8 putative permease, DMT superfamily compare
Dsui_1356 -1.6 -1.1 hypothetical protein compare
Dsui_2237 -1.6 -1.1 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_2741 -1.6 -1.1 PAS domain S-box compare
Dsui_2312 -1.6 -1.1 3-hydroxybutyrate dehydrogenase compare
Dsui_1433 -1.6 -0.8 chemotaxis protein compare
Dsui_0978 -1.6 -1.0 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_3371 -1.5 -1.1 putative oxidoreductase, aryl-alcohol dehydrogenase like protein compare
Dsui_2663 -1.5 -2.6 hypothetical protein compare
Dsui_1931 -1.5 -1.7 transcriptional regulator compare
Dsui_0871 -1.5 -0.5 hypothetical protein compare
Dsui_3377 -1.5 -1.0 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2970 -1.5 -1.3 putative Fe-S oxidoreductase compare
Dsui_2935 -1.5 -1.0 NAD/NADP transhydrogenase alpha subunit compare
Dsui_0510 -1.5 -1.0 ferredoxin-type protein, NapH/MauN family compare
Dsui_1855 -1.5 -1.0 hypothetical protein compare
Dsui_2127 -1.5 -0.9 flavodoxin reductase family protein compare
Dsui_0975 -1.5 -1.4 acyl-CoA dehydrogenase compare
Dsui_2080 -1.5 -1.0 response regulator compare
Dsui_2228 -1.5 -1.0 Zn-dependent alcohol dehydrogenase compare
Dsui_0837 -1.5 -2.4 tRNA modification GTPase TrmE compare
Dsui_1840 -1.5 -1.0 hypothetical protein compare
Dsui_1605 -1.5 -1.0 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2339 -1.5 -1.0 putative domain HDIG-containing protein compare
Dsui_1888 -1.5 -1.0 putative domain HDIG-containing protein compare
Dsui_0558 -1.5 -1.0 tetratricopeptide repeat protein compare
Dsui_0620 -1.5 -1.0 Fe2+-dicitrate sensor, membrane component compare
Dsui_0765 -1.5 -1.0 conserved hypothetical protein, proteobacterial compare
Dsui_0792 -1.5 -2.2 hypothetical protein compare
Dsui_3105 -1.5 -9.8 CBS domain-containing protein compare
Dsui_0990 -1.5 -1.5 putative P-loop-containing kinase compare
Dsui_0392 -1.5 -1.0 diacylglycerol kinase compare
Dsui_1701 -1.5 -1.0 restriction endonuclease compare
Dsui_1370 -1.5 -1.0 putative permease, DMT superfamily compare
Dsui_0692 -1.5 -2.4 hypothetical protein compare
Dsui_1104 -1.5 -1.0 putative thioesterase compare
Dsui_0733 -1.5 -1.0 hypothetical protein compare
Dsui_2687 -1.5 -5.8 RIP metalloprotease RseP compare
Dsui_2238 -1.5 -1.6 ABC-type dipeptide transport system, periplasmic component compare
Dsui_2953 -1.5 -1.0 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0173 -1.5 -1.0 site-specific DNA methylase compare
Dsui_1094 -1.5 -2.8 shikimate kinase compare
Dsui_2919 -1.4 -1.0 addiction module antidote protein, HigA family compare
Dsui_0436 -1.4 -1.0 dienelactone hydrolase-like enzyme compare
Dsui_0533 -1.4 -1.0 cobyrinic acid a,c-diamide synthase compare
Dsui_2033 -1.4 -1.0 transcriptional regulator compare
Dsui_3008 -1.4 -1.0 hydrogenase expression/formation protein compare
Dsui_2662 -1.4 -3.0 hypothetical protein compare
Dsui_3151 -1.4 -0.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1968 -1.4 -9.1 5''/3''-nucleotidase SurE compare
Dsui_2951 -1.4 -1.0 putative iron-regulated membrane protein compare
Dsui_3153 -1.4 -6.1 TRAP transporter, DctM subunit conserved
Dsui_2740 -1.4 -0.9 putative integral membrane protein compare
Dsui_3259 -1.4 -1.0 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_2457 -1.4 -7.2 GTP-binding protein LepA compare
Dsui_2543 -1.4 -0.5 hypothetical protein compare
Dsui_0553 -1.4 -0.9 putative nitrogen fixation protein compare
Dsui_3441 -1.4 -1.0 cation/multidrug efflux pump compare
Dsui_0306 -1.4 -0.9 putative permease compare
Dsui_0176 -1.4 -0.9 ribosome modulation factor compare
Dsui_3007 -1.4 -0.5 hydrogenase assembly chaperone HypC/HupF compare
Dsui_2429 -1.4 -1.0 putative permease compare
Dsui_1867 -1.4 -1.6 signal transduction histidine kinase compare
Dsui_3351 -1.4 -0.9 cytochrome c peroxidase compare
Dsui_2341 -1.4 -0.9 ABC-type multidrug transport system, ATPase component compare
Dsui_0778 -1.4 -2.0 small protein A (tmRNA-binding) compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source a-Ketoglutaric acid disodium salt hydrate in Dechlorosoma suillum PS

For carbon source a-Ketoglutaric acid disodium salt hydrate across organisms