Experiment set6IT041 for Marinobacter adhaerens HP15

Compare to:

marine broth with Thallium(I) acetate 0.016 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
HP15_3400 +3.2 14.7 transcriptional regulator, ArsR family protein compare
HP15_755 +2.3 10.9 Mg2+ and Co2+ transporter CorB compare
HP15_2116 +2.0 2.8 PP-loop domain protein compare
HP15_3811 +2.0 2.0 conserved hypothetical protein compare
HP15_3038 +1.9 13.3 N-succinylarginine dihydrolase compare
HP15_2442 +1.8 10.2 RNA polymerase, sigma 54 subunit, RpoN compare
HP15_2167 +1.6 5.5 transcriptional repressor for the dissimilation of sn-glycerol 3-phosphate, DeoR family protein compare
HP15_3628 +1.6 0.9 hypothetical protein compare
HP15_1222 +1.5 1.8 conserved hypothetical protein, membrane compare
HP15_220 +1.4 2.2 disulfide bond formation protein B compare
HP15_1895 +1.4 2.4 secreted protein containing PEP-CTERM bacterial domain compare
HP15_3055 +1.4 8.1 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein compare
HP15_2200 +1.3 4.2 oxidoreductase FAD/NAD(P)-binding domain protein compare
HP15_1244 +1.3 2.0 protein containing DUF1289 compare
HP15_3058 +1.3 5.8 leucine/isoleucine/valine transporter ATP-binding subunit compare
HP15_2201 +1.3 7.6 transcriptional regulator, LysR family compare
HP15_3390 +1.2 6.8 thioesterase superfamily protein compare
HP15_3059 +1.2 3.4 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein compare
HP15_2663 +1.2 5.3 response regulator receiver and unknown domain protein compare
HP15_228 +1.2 7.0 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
HP15_461 +1.2 1.3 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
HP15_3057 +1.2 7.7 leucine/isoleucine/valine transporter permease subunit compare
HP15_3344 +1.2 6.1 phosphate transporter family protein compare
HP15_2183 +1.2 6.8 DNA-binding ATP-dependent protease La compare
HP15_3042 +1.2 6.8 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
HP15_213 +1.1 2.1 cytochrome c5 compare
HP15_137 +1.1 0.7 hypothetical protein compare
HP15_1532 +1.1 1.5 transcriptional regulator, GntR family compare
HP15_4130 +1.1 2.1 molybdopterin-guanine dinucleotide biosynthesis protein A compare
HP15_701 +1.1 1.1 hypothetical protein compare
HP15_328 +1.1 0.7 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_337 +1.1 0.7 hypothetical protein compare
HP15_2427 +1.0 2.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
HP15_2638 +1.0 1.1 hypothetical protein compare
HP15_3056 +1.0 4.3 high-affinity branched-chain amino acid ABC transporter, permease protein compare
HP15_3603 +1.0 5.4 transcriptional regulator, HxlR family compare
HP15_2353 +1.0 3.3 LemA family protein compare
HP15_1263 +1.0 3.7 conserved hypothetical protein compare
HP15_2428 +0.9 3.6 histidinol dehydrogenase compare
HP15_p42g16 +0.9 2.4 conjugal transfer protein TraO compare
HP15_3981 +0.9 2.3 two component transcriptional regulator, Fis family compare
HP15_2232 +0.9 3.2 conserved hypothetical protein, membrane compare
HP15_2816 +0.9 1.4 membrane protein containing DUF1328 compare
HP15_2973 +0.9 2.4 flavoprotein wrbA compare
HP15_1626 +0.9 0.7 conserved hypothetical protein compare
HP15_1337 +0.9 1.0 conserved hypothetical protein, membrane compare
HP15_3277 +0.9 1.9 diadenosine tetraphosphatase compare
HP15_3148 +0.9 1.5 hypothetical protein compare
HP15_3261 +0.9 5.3 efflux transporter, RND family, MFP subunit compare
HP15_4126 +0.9 4.9 conserved hypothetical protein compare
HP15_1879 +0.9 1.3 conserved hypothetical protein, membrane compare
HP15_3781 +0.8 3.8 electron transport protein SCO1/SenC compare
HP15_p42g17 +0.8 5.2 traN-like protein compare
HP15_1770 +0.8 1.7 short-chain dehydrogenase/reductase SDR compare
HP15_2101 +0.8 2.0 membrane protein containing cytochrome c assembly protein, transmembrane region domain compare
HP15_1659 +0.8 2.8 hypothetical protein compare
HP15_1936 +0.8 1.2 conserved hypothetical protein compare
HP15_2006 +0.8 3.6 hypothetical protein compare
HP15_421 +0.8 3.0 MSHA pilin protein MshD compare
HP15_3021 +0.8 1.8 glycolate oxidase iron-sulfur subunit compare
HP15_2626 +0.8 4.3 conserved hypothetical protein compare
HP15_3262 +0.8 6.3 multidrug resistance protein compare
HP15_541 +0.8 3.7 peptide chain release factor 3 compare
HP15_979 +0.8 2.8 MOSC domain containing protein compare
HP15_3957 +0.8 3.5 endoribonuclease L-PSP family protein compare
HP15_1542 +0.8 1.9 hypothetical protein compare
HP15_3479 +0.8 1.5 secreted protein compare
HP15_2662 +0.8 3.4 two-component sensor histidine kinase compare
HP15_3624 +0.8 4.8 transporter, BCCT family protein compare
HP15_788 +0.8 5.4 multi-sensor hybrid histidine kinase compare
HP15_p187g18 +0.8 3.8 hypothetical protein compare
HP15_1559 +0.7 2.5 auxin efflux carrier compare
HP15_2348 +0.7 1.8 conserved hypothetical protein compare
HP15_2558 +0.7 3.8 putative nuclease compare
HP15_1473 +0.7 3.9 flagellar basal body L-ring protein compare
HP15_2130 +0.7 0.9 transcriptional regulator, TraR/DksA family compare
HP15_294 +0.7 2.8 conserved hypothetical protein, secreted compare
HP15_915 +0.7 2.6 secreted protein containing sulphatase-modifying factor domain compare
HP15_2509 +0.7 1.2 hypothetical protein compare
HP15_3577 +0.7 1.5 hypothetical protein compare
HP15_3355 +0.7 1.6 multi-sensor signal transduction histidine kinase compare
HP15_177 +0.7 1.3 hypothetical protein compare
HP15_tRNA50 +0.7 1.4 tRNA-Pro compare
HP15_4125 +0.7 5.2 Mrp/NBP35 family protein compare
HP15_954 +0.7 1.2 peptidoglycan-associated cytoplasmic membrane protein compare
HP15_3207 +0.7 3.1 ABC transporter, ATP-binding protein compare
HP15_2002 +0.7 0.8 conserved hypothetical protein compare
HP15_2760 +0.7 2.1 methyltransferase domain family compare
HP15_972 +0.7 3.3 hypothetical protein compare
HP15_208 +0.7 2.1 bacterioferritin compare
HP15_1209 +0.7 2.0 glycosyltransferase involved in cell wall biogenesis compare
HP15_2472 +0.6 3.3 hypothetical protein compare
HP15_2321 +0.6 1.1 anti-sigma-factor antagonist compare
HP15_1528 +0.6 1.3 chromosome segregation and condensation protein ScpA compare
HP15_2868 +0.6 1.2 hypothetical protein compare
HP15_2844 +0.6 1.2 hypothetical protein compare
HP15_3520 +0.6 1.1 protein containing CheW-like domain compare
HP15_p187g175 +0.6 2.3 conserved hypothetical protein compare
HP15_873 +0.6 0.9 conserved hypothetical protein compare
HP15_2470 +0.6 1.7 metal ion transporter compare
HP15_4009 +0.6 4.0 flagellar motor protein MotB compare
HP15_p42g15 +0.6 3.2 KfrA protein compare
HP15_2618 +0.6 1.5 dodecin flavoprotein compare
HP15_799 +0.6 1.5 undecaprenyl pyrophosphate phosphatase-like protein compare
HP15_2368 +0.6 3.2 flagellar protein FliS compare
HP15_2885 +0.6 2.2 secreted protein containing competence protein ComEA, helix-hairpin-helix region domain compare
HP15_517 +0.6 2.2 membrane or secreted protein compare
HP15_1808 +0.6 2.2 peptide ABC transporter, permease protein compare
HP15_3897 +0.6 3.8 conserved hypothetical protein compare
HP15_594 +0.6 1.6 peptidoglycan-binding domain 1 protein-like protein compare
HP15_3561 +0.6 3.3 haloacid dehalogenase, type II compare
HP15_218 +0.6 1.1 conserved hypothetical protein compare
HP15_3545 +0.6 1.2 transcriptional regulator, MerR family compare
HP15_2798 +0.6 2.6 protein containing cupin 2, conserved barrel domain compare
HP15_1797 +0.6 2.9 quinone oxidoreductase, YhdH/YhfP family compare
HP15_p187g52 +0.6 1.2 hypothetical protein compare
HP15_3039 +0.6 2.4 N-succinylglutamate 5-semialdehyde dehydrogenase compare
HP15_743 +0.6 1.3 hypothetical protein compare
HP15_3253 +0.6 3.3 ferritin-like DNA-binding protein compare
HP15_1774 +0.6 1.6 conserved hypothetical protein, membrane compare
HP15_973 +0.6 1.2 conserved hypothetical protein compare
HP15_3399 +0.6 2.5 glyceraldehyde-3-phosphate dehydrogenase, type I compare
HP15_261 +0.6 0.7 hypothetical protein compare
HP15_1969 +0.6 1.2 hypothetical protein compare
HP15_412 +0.6 1.4 conserved hypothetical protein, secreted compare
HP15_1422 +0.6 2.0 amino acid ABC transporter ATP-binding protein compare
HP15_1236 +0.6 4.5 conserved hypothetical protein compare
HP15_4010 +0.6 3.5 flagellar motor protein PomA compare
HP15_2316 +0.6 1.8 flagellar basal body-associated protein FliL compare
HP15_1562 +0.6 2.8 conserved hypothetical protein compare
HP15_34 +0.6 2.7 transcriptional regulator, IclR family compare
HP15_1675 +0.6 1.6 hypothetical protein compare
HP15_158 +0.6 1.4 protein MerR-like protein compare
HP15_2100 +0.6 2.1 transporting ATPase compare
HP15_455 +0.6 1.0 protein containing DUF1249 compare
HP15_1490 +0.6 2.0 conserved hypothetical protein compare
HP15_3666 +0.6 1.6 hypothetical protein compare
HP15_2073 +0.6 1.7 peptidyl-arginine deiminase family protein compare
HP15_2054 +0.6 1.0 cold shock, CspA compare
HP15_2450 +0.6 4.0 conserved hypothetical protein compare
HP15_2329 +0.6 3.8 two-component sensor compare
HP15_2928 +0.6 3.4 signal transduction protein compare
HP15_1975 +0.6 1.3 conserved hypothetical protein compare
HP15_4045 +0.5 2.2 hypothetical protein compare
HP15_550 +0.5 2.6 phosphoheptose isomerase compare
HP15_866 +0.5 1.4 conserved hypothetical protein, membrane compare
HP15_4176 +0.5 1.8 electron-transferring-flavoprotein dehydrogenase compare
HP15_2310 +0.5 3.1 flagellar biosynthesis protein FliR compare
HP15_1218 +0.5 4.0 OmpA/MotB domain protein compare
HP15_2621 +0.5 2.0 branched-chain amino acid transport compare
HP15_3982 +0.5 3.7 sensor signal transduction histidine kinase-like protein compare
HP15_p42g32 +0.5 1.2 hypothetical protein compare
HP15_940 +0.5 2.6 putrescine ABC transporter, periplasmic putrescine-binding protein compare
HP15_1124 +0.5 2.2 conserved hypothetical protein compare
HP15_2780 +0.5 1.4 monofunctional biosynthetic peptidoglycan transglycosylase compare
HP15_2081 +0.5 1.5 ATP-dependent Clp protease adaptor protein ClpS compare
HP15_1627 +0.5 1.8 conserved hypothetical protein compare
HP15_4090 +0.5 2.6 L-lactate dehydrogenase, LutC subunit (from data) compare
HP15_3126 +0.5 2.2 cytochrome c protein compare
HP15_2964 +0.5 0.4 hypothetical protein compare
HP15_3640 +0.5 1.7 conserved hypothetical protein, RES superfamily compare
HP15_3846 +0.5 1.6 ethyl tert-butyl ether degradation EthD compare
HP15_1472 +0.5 3.4 flagellar basal-body rod protein FlgG compare
HP15_p187g176 +0.5 3.9 conserved hypothetical protein compare
HP15_1784 +0.5 2.0 protein belonging to uncharacterized protein family UPF0005 compare
HP15_3590 +0.5 1.9 transglutaminase, N-terminal domain protein compare
HP15_3914 +0.5 2.8 carboxylate/amino acid/amine transporter compare
HP15_221 +0.5 1.9 anti-RNA polymerase sigma 70 factor compare
HP15_1265 +0.5 2.5 conserved hypothetical protein, membrane compare
HP15_p187g3 +0.5 0.7 conserved hypothetical protein, secreted compare
HP15_904 +0.5 2.1 conserved hypothetical protein compare
HP15_804 +0.5 1.8 protein containing DUF470 compare
HP15_3639 +0.5 1.9 tetratricopeptide repeat protein-like protein compare
HP15_4075 +0.5 1.7 TRAP dicarboxylate transporter, DctQ subunit compare
HP15_1097 +0.5 2.2 branched-chain amino acid ABC transporter, ATP-binding protein compare
HP15_278 +0.5 2.5 tRNA (guanine-N(7)-)-methyltransferase compare
HP15_1297 +0.5 0.8 conserved hypothetical protein, secreted compare
HP15_3254 +0.5 2.2 hypothetical protein compare
HP15_2003 +0.5 1.0 hypothetical protein compare
HP15_3360 +0.5 1.5 asparaginase compare
HP15_2315 +0.5 1.9 flagellar motor switch protein FliM-like protein compare
HP15_2360 +0.5 1.7 FxsA cytoplasmic membrane protein compare
HP15_188 +0.5 2.4 plasmid pTOM9 ORF1-like protein compare
HP15_p187g98 +0.5 2.0 hypothetical protein compare
HP15_3092 +0.5 2.6 conserved hypothetical protein compare
HP15_817 +0.5 1.7 3-isopropylmalate dehydrogenase compare
HP15_2008 +0.5 0.7 conserved hypothetical protein compare
HP15_p42g14 +0.5 0.9 hypothetical protein compare
HP15_2305 +0.5 4.0 flagellar biosynthesis protein A compare
HP15_2097 +0.5 1.9 protease HtpX-like protein compare
HP15_1789 +0.5 1.3 conserved hypothetical protein compare
HP15_3108 +0.5 0.5 hypothetical protein compare
HP15_1467 +0.5 1.0 fFlagellar basal-body rod protein FlgB compare
HP15_p187g145 +0.5 2.3 transcriptional regulator MvaT, P16 subunit compare
HP15_2078 +0.5 2.3 arginyl-tRNA-protein transferase compare
HP15_1461 +0.5 1.0 ATP-binding component of ABC transporter compare
HP15_542 +0.5 2.7 TatD-related deoxyribonuclease compare
HP15_425 +0.5 2.0 two-component response regulator NtrC compare
HP15_2814 +0.5 1.0 rhodanese domain sulfurtransferase-like protein compare
HP15_1650 +0.5 1.4 iron-sulfur cluster-binding protein-like protein compare


Specific Phenotypes

For 9 genes in this experiment

For stress Thallium(I) acetate in Marinobacter adhaerens HP15

For stress Thallium(I) acetate across organisms