Experiment set6IT040 for Dechlorosoma suillum PS

Compare to:

Sodium propionate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -9.0 -7.2 phosphotransferase system HPr (HPr) family protein compare
Dsui_0423 -5.8 -5.6 putative permease compare
Dsui_0519 -5.6 -24.5 Methylmalonyl-CoA mutase (EC 5.4.99.2) (from data) conserved
Dsui_2717 -5.6 -5.4 RNA polymerase-binding protein DksA compare
Dsui_0517 -5.3 -7.3 Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) (from data) conserved
Dsui_0742 -5.3 -9.4 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_2816 -5.3 -3.6 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1297 -5.0 -10.1 biotin synthetase compare
Dsui_0516 -4.8 -15.3 Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) (from data) conserved
Dsui_1577 -4.7 -3.7 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_3139 -4.5 -3.1 outer membrane assembly lipoprotein YfgL compare
Dsui_2881 -4.5 -12.9 8-amino-7-oxononanoate synthase compare
Dsui_2883 -4.4 -10.7 biotin biosynthesis protein BioC compare
Dsui_2880 -4.4 -17.3 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_2884 -4.2 -8.9 dethiobiotin synthase compare
Dsui_1529 -4.1 -7.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2882 -4.0 -8.9 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_1578 -3.9 -2.7 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_0518 -3.9 -14.3 methylmalonyl-CoA-mutase-associated GTPase MeaB (from data) conserved
Dsui_1445 -3.8 -2.6 succinyl-CoA synthetase, beta subunit compare
Dsui_2651 -3.7 -2.0 ankyrin repeat-containing protein compare
Dsui_0025 -3.7 -2.4 hypothetical protein compare
Dsui_1402 -3.6 -5.7 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_1576 -3.6 -3.1 dihydrolipoamide dehydrogenase compare
Dsui_1446 -3.4 -3.0 succinyl-CoA synthetase, alpha subunit compare
Dsui_0870 -3.2 -11.8 putative membrane protein compare
Dsui_1600 -3.2 -13.2 putative enzyme of heme biosynthesis compare
Dsui_2877 -3.1 -2.1 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_1599 -3.1 -13.5 putative enzyme of heme biosynthesis compare
Dsui_1002 -3.1 -1.7 prolyl oligopeptidase family protein compare
Dsui_1490 -3.1 -2.1 DNA-binding protein, excisionase family compare
Dsui_0174 -3.0 -2.0 hypothetical protein compare
Dsui_1970 -3.0 -8.0 metalloendopeptidase-like membrane protein compare
Dsui_3524 -2.9 -11.3 signal transduction histidine kinase compare
Dsui_1674 -2.8 -1.9 EAL domain-containing protein compare
Dsui_1819 -2.7 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_3298 -2.7 -13.9 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_1045 -2.7 -1.9 hypothetical protein compare
Dsui_1852 -2.7 -1.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3523 -2.7 -10.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0023 -2.7 -2.6 acetylornithine/succinylornithine aminotransferase compare
Dsui_3099 -2.7 -1.8 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_1403 -2.7 -3.0 putative NTP binding protein (contains STAS domain) compare
Dsui_1893 -2.6 -1.5 putative membrane protein compare
Dsui_1580 -2.6 -6.7 PAS domain S-box compare
Dsui_0171 -2.6 -1.7 putative transcriptional regulator compare
Dsui_1978 -2.6 -3.5 putative lipoprotein compare
Dsui_2870 -2.6 -5.2 putative permease compare
Dsui_1408 -2.6 -0.8 NifZ domain-containing protein compare
Dsui_0417 -2.5 -1.7 gamma-glutamyltransferase compare
Dsui_1825 -2.5 -1.7 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_1242 -2.4 -1.7 hypothetical protein compare
Dsui_0641 -2.4 -2.3 putative rRNA methylase compare
Dsui_1619 -2.4 -1.6 putative membrane-associated, metal-dependent hydrolase compare
Dsui_0297 -2.4 -1.6 sugar fermentation stimulation protein compare
Dsui_2306 -2.4 -6.8 transcriptional regulator compare
Dsui_3448 -2.3 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2027 -2.3 -1.6 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_3465 -2.3 -1.6 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_0487 -2.3 -1.4 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1620 -2.3 -1.4 PAP2 (acid phosphatase) superfamily protein compare
Dsui_2189 -2.2 -4.1 acyl-CoA synthetase (NDP forming) compare
Dsui_1396 -2.2 -1.5 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_0116 -2.2 -1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_0966 -2.2 -2.6 methyl-accepting chemotaxis protein compare
Dsui_1857 -2.2 -1.4 putative permease, DMT superfamily compare
Dsui_0512 -2.2 -1.5 Methylmalonyl-CoA epimerase (EC 5.1.99.1) (from data) compare
Dsui_0003 -2.1 -5.8 putative Zn-dependent protease compare
Dsui_2342 -2.1 -1.4 multidrug resistance efflux pump compare
Dsui_1442 -2.1 -1.4 putative efflux protein, MATE family compare
Dsui_3006 -2.1 -1.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_1607 -2.1 -1.8 putative membrane-associated protein compare
Dsui_3231 -2.1 -1.4 hypothetical protein compare
Dsui_0520 -2.1 -10.4 transcriptional regulator compare
Dsui_1669 -2.1 -1.3 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0569 -2.1 -1.9 hypothetical protein compare
Dsui_3026 -2.1 -1.1 hydrogenase maturation protease compare
Dsui_3478 -2.1 -1.0 hypothetical protein compare
Dsui_0209 -2.1 -1.4 hypothetical protein compare
Dsui_0105 -2.1 -2.4 NAD-dependent aldehyde dehydrogenase compare
Dsui_0787 -2.1 -11.2 putative membrane protein compare
Dsui_2866 -2.1 -1.4 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_0316 -2.1 -1.4 hypothetical protein compare
Dsui_3114 -2.0 -1.3 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3115 -2.0 -0.9 hypothetical protein compare
Dsui_0253 -2.0 -1.4 HIRAN domain-containing protein compare
Dsui_3426 -2.0 -1.4 transcriptional regulator compare
Dsui_3105 -2.0 -13.6 CBS domain-containing protein compare
Dsui_3077 -2.0 -1.4 hypothetical protein compare
Dsui_0618 -2.0 -1.3 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_2921 -2.0 -2.0 isochorismate synthase family protein compare
Dsui_3366 -2.0 -1.3 glycerophosphoryl diester phosphodiesterase compare
Dsui_1660 -2.0 -1.3 outer membrane cobalamin receptor protein compare
Dsui_1311 -2.0 -1.2 hypothetical protein compare
Dsui_1401 -2.0 -6.9 surface lipoprotein compare
Dsui_1094 -2.0 -3.1 shikimate kinase compare
Dsui_3117 -2.0 -1.3 hypothetical protein compare
Dsui_1368 -2.0 -1.3 hypothetical protein compare
Dsui_3125 -2.0 -1.3 cytochrome c, mono- and diheme variants family compare
Dsui_0945 -1.9 -1.0 Iron-sulfur cluster assembly accessory protein compare
Dsui_0542 -1.9 -4.0 cobyric acid synthase CobQ compare
Dsui_2433 -1.9 -12.2 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_2893 -1.9 -2.8 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3178 -1.9 -1.3 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_2330 -1.9 -1.8 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_2443 -1.9 -2.6 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_1165 -1.9 -1.3 Ni,Fe-hydrogenase I large subunit compare
Dsui_1618 -1.9 -1.3 signal transduction histidine kinase compare
Dsui_1659 -1.9 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2772 -1.9 -1.6 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_1149 -1.9 -1.3 Zn-dependent protease with chaperone function compare
Dsui_0431 -1.9 -1.8 putative permease, DMT superfamily compare
Dsui_2321 -1.9 -1.8 site-specific recombinase compare
Dsui_1398 -1.8 -8.9 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_3393 -1.8 -6.6 Kef-type K+ transport system, membrane component compare
Dsui_2352 -1.8 -1.2 hypothetical protein compare
Dsui_0477 -1.8 -3.2 tol-pal system protein YbgF compare
Dsui_1296 -1.8 -1.2 putative amidophosphoribosyltransferase compare
Dsui_0968 -1.8 -1.8 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_2762 -1.8 -0.8 Protein of unknown function (DUF3617) compare
Dsui_0469 -1.8 -4.1 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2312 -1.8 -1.2 3-hydroxybutyrate dehydrogenase compare
Dsui_0725 -1.8 -4.9 putative hydrolase of the alpha/beta superfamily compare
Dsui_1701 -1.8 -1.2 restriction endonuclease compare
Dsui_0173 -1.8 -1.2 site-specific DNA methylase compare
Dsui_1855 -1.8 -1.1 hypothetical protein compare
Dsui_0871 -1.8 -0.5 hypothetical protein compare
Dsui_1394 -1.8 -3.0 hypothetical protein compare
Dsui_1840 -1.8 -1.2 hypothetical protein compare
Dsui_1433 -1.7 -0.8 chemotaxis protein compare
Dsui_1605 -1.7 -1.2 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2869 -1.7 -11.3 transcriptional regulator compare
Dsui_2339 -1.7 -1.2 putative domain HDIG-containing protein compare
Dsui_1370 -1.7 -1.2 putative permease, DMT superfamily compare
Dsui_3226 -1.7 -2.0 putative SAM-dependent methyltransferase compare
Dsui_2294 -1.7 -1.2 phasin family protein compare
Dsui_2975 -1.7 -1.2 TonB-dependent siderophore receptor compare
Dsui_1399 -1.7 -5.7 conserved hypothetical integral membrane protein compare
Dsui_3377 -1.7 -1.2 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0733 -1.7 -1.2 hypothetical protein compare
Dsui_3431 -1.7 -1.6 Protein of unknown function (DUF3240) compare
Dsui_1888 -1.7 -1.1 putative domain HDIG-containing protein compare
Dsui_0176 -1.7 -1.1 ribosome modulation factor compare
Dsui_1104 -1.7 -1.2 putative thioesterase compare
Dsui_0691 -1.7 -0.9 hypothetical protein compare
Dsui_2228 -1.7 -1.1 Zn-dependent alcohol dehydrogenase compare
Dsui_2080 -1.7 -1.1 response regulator compare
Dsui_1145 -1.7 -3.7 site-specific recombinase XerD compare
Dsui_2127 -1.7 -0.9 flavodoxin reductase family protein compare
Dsui_2457 -1.7 -8.7 GTP-binding protein LepA compare
Dsui_0558 -1.7 -1.1 tetratricopeptide repeat protein compare
Dsui_2741 -1.7 -1.1 PAS domain S-box compare
Dsui_0924 -1.7 -1.6 putative permease compare
Dsui_2325 -1.7 -1.7 hypothetical protein compare
Dsui_0598 -1.7 -2.1 hypothetical protein compare
Dsui_0765 -1.7 -1.6 conserved hypothetical protein, proteobacterial compare
Dsui_2518 -1.7 -1.9 hypothetical protein compare
Dsui_3240 -1.7 -8.1 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0510 -1.7 -1.1 ferredoxin-type protein, NapH/MauN family compare
Dsui_0306 -1.7 -1.1 putative permease compare
Dsui_2895 -1.7 -1.1 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1818 -1.7 -4.6 anthranilate phosphoribosyltransferase compare
Dsui_2122 -1.7 -1.1 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_1159 -1.6 -4.7 hydrogenase expression/formation protein HypD compare
Dsui_3259 -1.6 -1.1 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_3227 -1.6 -6.9 2-isopropylmalate synthase compare
Dsui_2960 -1.6 -3.0 hypothetical protein compare
Dsui_3424 -1.6 -4.6 ATP:cob(I)alamin adenosyltransferase compare
Dsui_2076 -1.6 -1.5 cytochrome c, mono- and diheme variants family compare
Dsui_1817 -1.6 -1.1 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_2033 -1.6 -1.1 transcriptional regulator compare
Dsui_0553 -1.6 -1.0 putative nitrogen fixation protein compare
Dsui_1675 -1.6 -1.0 hypothetical protein compare
Dsui_2269 -1.6 -8.1 SOS regulatory protein LexA compare
Dsui_1739 -1.6 -1.5 flagellar basal-body P-ring protein compare
Dsui_2429 -1.6 -1.1 putative permease compare
Dsui_2969 -1.6 -1.8 uroporphyrin-III C-methyltransferase compare
Dsui_2341 -1.6 -1.1 ABC-type multidrug transport system, ATPase component compare
Dsui_1000 -1.6 -1.1 hypothetical protein compare
Dsui_1559 -1.6 -1.1 hypothetical protein compare
Dsui_1160 -1.6 -1.1 hydrogenase assembly chaperone HypC/HupF compare
Dsui_3228 -1.6 -9.6 transcriptional regulator compare
Dsui_2935 -1.6 -1.1 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1742 -1.6 -1.1 flagellar hook-associated protein 3 compare
Dsui_0846 -1.6 -3.9 glucose-inhibited division protein A compare
Dsui_0200 -1.6 -1.0 hypothetical protein compare
Dsui_3441 -1.6 -1.1 cation/multidrug efflux pump compare
Dsui_2740 -1.6 -1.0 putative integral membrane protein compare
Dsui_3351 -1.6 -1.1 cytochrome c peroxidase compare
Dsui_0401 -1.6 -1.7 nucleoside-diphosphate-sugar epimerase compare
Dsui_1851 -1.6 -1.1 signal transduction histidine kinase compare
Dsui_2384 -1.6 -1.1 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1044 -1.6 -1.1 hypothetical protein compare
Dsui_0470 -1.6 -7.8 fructose-2,6-bisphosphatase compare
Dsui_1227 -1.6 -5.7 DNA/RNA helicase, superfamily I compare
Dsui_3008 -1.6 -1.0 hydrogenase expression/formation protein compare
Dsui_3495 -1.6 -2.4 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0692 -1.6 -3.1 hypothetical protein compare
Dsui_2349 -1.6 -1.1 Zn-dependent hydrolase, glyoxylase compare
Dsui_3274 -1.6 -1.1 dihydrodipicolinate reductase compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source Sodium propionate in Dechlorosoma suillum PS

For carbon source Sodium propionate across organisms