Experiment set6IT039 for Pseudomonas fluorescens FW300-N2E2

Compare to:

LB with Sodium molybdate 0.25 M

200 most important genes:

  gene name fitness t score description  
Pf6N2E2_773 -5.0 -6.0 Undecaprenyl-diphosphatase (EC 3.6.1.27) compare
Pf6N2E2_3834 -5.0 -4.9 Lipoprotein NlpD compare
Pf6N2E2_3833 -4.9 -5.8 hypothetical protein compare
Pf6N2E2_3617 -4.9 -3.4 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) compare
Pf6N2E2_5956 -4.4 -5.2 FIG004453: protein YceG like compare
Pf6N2E2_4585 -4.4 -11.6 Cell division protein FtsX compare
Pf6N2E2_5771 -4.4 -8.3 FKBP-type peptidyl-prolyl cis-trans isomerase FklB (EC 5.2.1.8) compare
Pf6N2E2_4584 -4.1 -4.0 Cell division transporter, ATP-binding protein FtsE (TC 3.A.5.1.1) compare
Pf6N2E2_2278 -3.9 -16.0 Transcription-repair coupling factor compare
Pf6N2E2_5006 -3.9 -9.0 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) compare
Pf6N2E2_3475 -3.8 -2.6 hypothetical protein compare
Pf6N2E2_3658 -3.8 -5.8 Lipid A core - O-antigen ligase and related enzymes compare
Pf6N2E2_4057 -3.8 -1.7 lipoprotein, putative compare
Pf6N2E2_2754 -3.5 -4.1 Sigma factor RpoE negative regulatory protein RseB precursor compare
Pf6N2E2_5245 -3.4 -8.5 Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1) compare
Pf6N2E2_1087 -3.4 -9.4 Iron siderophore sensor protein compare
Pf6N2E2_4743 -3.4 -1.5 hypothetical protein compare
Pf6N2E2_5342 -3.2 -3.8 21 kDa hemolysin precursor compare
Pf6N2E2_4205 -3.2 -4.3 Chromosome (plasmid) partitioning protein ParA compare
Pf6N2E2_3941 -3.1 -3.7 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) compare
Pf6N2E2_3839 -3.1 -5.1 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Pf6N2E2_3665 -3.1 -1.3 serine/threonine protein kinase compare
Pf6N2E2_1633 -3.0 -3.6 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) compare
Pf6N2E2_2586 -3.0 -2.1 Hpt domain protein compare
Pf6N2E2_1634 -3.0 -6.0 ABC-type Fe3+-siderophore transport system, permease component compare
Pf6N2E2_3782 -3.0 -4.5 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) compare
Pf6N2E2_5242 -2.9 -2.7 Malate:quinone oxidoreductase (EC 1.1.5.4) compare
Pf6N2E2_3791 -2.8 -10.0 Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-) compare
Pf6N2E2_3252 -2.7 -7.3 Histidinol dehydrogenase (EC 1.1.1.23) compare
Pf6N2E2_2824 -2.7 -9.8 RND efflux system, inner membrane transporter CmeB compare
Pf6N2E2_3460 -2.7 -1.8 Exodeoxyribonuclease V beta chain (EC 3.1.11.5) compare
Pf6N2E2_156 -2.7 -2.7 Carbon storage regulator compare
Pf6N2E2_2753 -2.7 -2.6 HtrA protease/chaperone protein compare
Pf6N2E2_5001 -2.7 -1.8 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) compare
Pf6N2E2_504 -2.6 -3.2 DNA-binding response regulator compare
Pf6N2E2_282 -2.6 -2.1 GNAT family acetyltransferase YjcF compare
Pf6N2E2_3285 -2.6 -2.8 Rod shape-determining protein MreD compare
Pf6N2E2_1636 -2.5 -7.5 Ferrichrome-iron receptor compare
Pf6N2E2_5660 -2.5 -6.0 L-Arginine ABC transporter, periplasmic substrate-binding component (from data) compare
Pf6N2E2_3842 -2.5 -3.4 Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) compare
Pf6N2E2_2825 -2.4 -3.7 RND efflux system, outer membrane lipoprotein CmeC compare
Pf6N2E2_2313 -2.4 -3.9 Cytochrome c oxidase subunit CcoP (EC 1.9.3.1) compare
Pf6N2E2_4996 -2.4 -1.9 LSU m3Psi1915 methyltransferase RlmH compare
Pf6N2E2_3841 -2.4 -5.3 Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-) compare
Pf6N2E2_3282 -2.4 -1.6 FIG005080: Possible exported protein compare
Pf6N2E2_1056 -2.3 -1.3 Quinone oxidoreductase (EC 1.6.5.5) compare
Pf6N2E2_4071 -2.3 -4.5 Phosphate transport system regulatory protein PhoU compare
Pf6N2E2_5150 -2.3 -5.8 Glucose-6-phosphate isomerase (EC 5.3.1.9) compare
Pf6N2E2_2510 -2.3 -5.0 Lipid carrier : UDP-N-acetylgalactosaminyltransferase (EC 2.4.1.-) / Alpha-1,3-N-acetylgalactosamine transferase PglA (EC 2.4.1.-); Putative glycosyltransferase compare
Pf6N2E2_1656 -2.3 -2.1 hypothetical protein compare
Pf6N2E2_2574 -2.3 -2.1 Flagellar synthesis regulator FleN compare
Pf6N2E2_5014 -2.3 -1.4 Apolipoprotein N-acyltransferase (EC 2.3.1.-) / Copper homeostasis protein CutE compare
Pf6N2E2_3610 -2.2 -5.3 ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17) compare
Pf6N2E2_445 -2.2 -5.9 UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) compare
Pf6N2E2_4054 -2.2 -2.7 Osmotically inducible protein C compare
Pf6N2E2_5069 -2.1 -4.8 putative Cytochrome bd2, subunit II compare
Pf6N2E2_746 -2.1 -1.6 FIG00958097: hypothetical protein compare
Pf6N2E2_5128 -2.1 -3.2 COG1496: Uncharacterized conserved protein compare
Pf6N2E2_4153 -2.1 -1.4 Sensory box histidine kinase compare
Pf6N2E2_5661 -2.1 -4.7 L-Arginine ABC transporter, permease protein AotQ (from data) compare
Pf6N2E2_2514 -2.1 -4.4 regulator of length of O-antigen component of lipopolysaccharide chains compare
Pf6N2E2_3521 -2.1 -6.8 Sensor histidine kinase/response regulator compare
Pf6N2E2_2010 -2.1 -1.9 hypothetical protein compare
Pf6N2E2_5584 -2.1 -2.9 Bacterioferritin-associated ferredoxin compare
Pf6N2E2_819 -2.0 -2.6 Response regulator compare
Pf6N2E2_4963 -1.9 -1.4 Homoserine dehydrogenase (EC 1.1.1.3) compare
Pf6N2E2_3661 -1.9 -3.7 hypothetical protein compare
Pf6N2E2_2318 -1.9 -7.0 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) compare
Pf6N2E2_5172 -1.9 -2.2 FOG: TPR repeat compare
Pf6N2E2_3179 -1.9 -2.6 FIG021952: putative membrane protein compare
Pf6N2E2_5662 -1.9 -7.4 L-Arginine ABC transporter, permease protein AotM (from data) compare
Pf6N2E2_2506 -1.9 -10.3 nucleotide sugar epimerase/dehydratase WbpM compare
Pf6N2E2_292 -1.9 -7.3 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Pf6N2E2_3251 -1.9 -5.9 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Pf6N2E2_2311 -1.8 -6.5 Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) compare
Pf6N2E2_3253 -1.8 -5.3 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Pf6N2E2_1632 -1.8 -4.4 Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1) compare
Pf6N2E2_4579 -1.8 -1.9 Ribosomal RNA small subunit methyltransferase D (EC 2.1.1.-) compare
Pf6N2E2_2384 -1.8 -4.2 CmpX compare
Pf6N2E2_2211 -1.8 -5.0 Hydrolase, carbon-nitrogen family compare
Pf6N2E2_3301 -1.8 -9.3 ABC transporter, ATP-binding protein compare
Pf6N2E2_2201 -1.8 -3.6 Transmembrane regulator protein PrtR compare
Pf6N2E2_1626 -1.8 -5.3 Putative ATP-binding component of a transport system compare
Pf6N2E2_2181 -1.8 -1.9 Arginine N-succinyltransferase (EC 2.3.1.109) compare
Pf6N2E2_5156 -1.8 -2.3 Two-component sensor CbrB: intrcellular carbon:nitrogen balance compare
Pf6N2E2_4146 -1.8 -2.4 Membrane lipoprotein lipid attachment site containing protein USSDB6D compare
Pf6N2E2_2823 -1.8 -4.0 Multidrug efflux RND membrane fusion protein MexC compare
Pf6N2E2_2320 -1.7 -2.8 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein compare
Pf6N2E2_1673 -1.7 -1.5 Transcriptional regulator, TetR family compare
Pf6N2E2_3792 -1.7 -3.4 Glucans biosynthesis protein G precursor compare
Pf6N2E2_5252 -1.7 -1.8 FIG00956396: hypothetical protein compare
Pf6N2E2_4352 -1.7 -3.0 ATP-dependent DNA helicase RecG (EC 3.6.1.-) compare
Pf6N2E2_42 -1.7 -4.0 Sensor protein PhoQ (EC 2.7.13.3) compare
Pf6N2E2_2106 -1.7 -1.6 hypothetical protein compare
Pf6N2E2_2938 -1.6 -4.1 Outer membrane lipoprotein compare
Pf6N2E2_3835 -1.6 -2.6 Carboxyl-terminal protease (EC 3.4.21.102) compare
Pf6N2E2_5544 -1.6 -5.3 TPR repeat containing exported protein; Putative periplasmic protein contains a protein prenylyltransferase domain compare
Pf6N2E2_5178 -1.6 -2.1 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) compare
Pf6N2E2_5725 -1.6 -4.5 nucleoprotein/polynucleotide-associated enzyme compare
Pf6N2E2_1635 -1.6 -3.9 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components compare
Pf6N2E2_5766 -1.6 -1.3 Quaternary ammonium compound-resistance protein SugE compare
Pf6N2E2_2309 -1.5 -2.0 hypothetical protein compare
Pf6N2E2_3516 -1.5 -1.8 Probable transmembrane protein compare
Pf6N2E2_5068 -1.5 -7.5 putative Cytochrome bd2, subunit I compare
Pf6N2E2_1694 -1.5 -1.4 FMN reductase (EC 1.5.1.29) compare
Pf6N2E2_5727 -1.5 -4.4 FIG00955360: hypothetical protein compare
Pf6N2E2_4187 -1.4 -3.2 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) compare
Pf6N2E2_5780 -1.4 -6.6 Periplasmic protease compare
Pf6N2E2_451 -1.4 -2.4 transcriptional regulator MvaT, P16 subunit, putative compare
Pf6N2E2_2634 -1.4 -6.4 Potassium uptake protein TrkH compare
Pf6N2E2_3783 -1.4 -3.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Pf6N2E2_144 -1.4 -9.4 Uncharacterized protein YtfM precursor compare
Pf6N2E2_2071 -1.4 -2.0 hypothetical protein compare
Pf6N2E2_5316 -1.4 -1.8 Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation compare
Pf6N2E2_4556 -1.4 -2.1 FIG00953078: hypothetical protein compare
Pf6N2E2_2503 -1.4 -1.1 Glycosyl transferase, group 1 family protein compare
Pf6N2E2_2344 -1.4 -6.8 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) compare
Pf6N2E2_309 -1.4 -1.4 FIG00957702: hypothetical protein compare
Pf6N2E2_6100 -1.3 -2.3 tRNA-Val-TAC compare
Pf6N2E2_1452 -1.3 -2.5 hypothetical protein compare
Pf6N2E2_5758 -1.3 -1.7 FIG00957314: hypothetical protein compare
Pf6N2E2_4046 -1.3 -9.2 FIG00953482: hypothetical protein compare
Pf6N2E2_4708 -1.3 -2.1 hypothetical protein compare
Pf6N2E2_2509 -1.3 -1.5 UDP-glucose 4-epimerase (EC 5.1.3.2) compare
Pf6N2E2_2310 -1.3 -6.0 Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) compare
Pf6N2E2_756 -1.3 -3.9 hypothetical protein compare
Pf6N2E2_2261 -1.3 -4.7 VacJ-like lipoprotein precursor compare
Pf6N2E2_2755 -1.3 -1.0 Sigma factor RpoE negative regulatory protein RseA compare
Pf6N2E2_75 -1.3 -2.8 Colicin V production protein compare
Pf6N2E2_2724 -1.3 -3.0 Nitroreductase family protein compare
Pf6N2E2_145 -1.3 -6.8 putative exported protein compare
Pf6N2E2_4531 -1.3 -1.2 hypothetical protein compare
Pf6N2E2_2002 -1.3 -2.8 hypothetical protein compare
Pf6N2E2_4206 -1.3 -1.1 Chromosome (plasmid) partitioning protein ParB compare
Pf6N2E2_2312 -1.2 -1.7 Cytochrome c oxidase subunit CcoQ (EC 1.9.3.1) compare
Pf6N2E2_4479 -1.2 -3.0 FIG001590: Putative conserved exported protein precursor compare
Pf6N2E2_1966 -1.2 -2.1 SAM-dependent methyltransferases compare
Pf6N2E2_3243 -1.2 -7.6 FIG067310: hypothetical protein compare
Pf6N2E2_88 -1.2 -1.7 hypothetical protein compare
Pf6N2E2_2117 -1.2 -7.2 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) compare
Pf6N2E2_3260 -1.2 -3.4 Uncharacterized ABC transporter, ATP-binding protein YrbF compare
Pf6N2E2_3328 -1.2 -1.3 transcriptional regulator compare
Pf6N2E2_3221 -1.2 -2.8 FIG00352444: hypothetical protein compare
Pf6N2E2_3638 -1.2 -2.3 hypothetical protein compare
Pf6N2E2_4045 -1.2 -2.5 FIG00953248: hypothetical protein compare
Pf6N2E2_4121 -1.2 -3.3 Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) compare
Pf6N2E2_2579 -1.2 -2.9 Flagellar biosynthesis protein FliQ compare
Pf6N2E2_2088 -1.2 -1.2 SOS-response repressor and protease LexA (EC 3.4.21.88) compare
Pf6N2E2_3840 -1.2 -2.6 FIG00956267: hypothetical protein compare
Pf6N2E2_52 -1.2 -7.6 Excinuclease ABC subunit B compare
Pf6N2E2_987 -1.2 -1.5 hypothetical protein compare
Pf6N2E2_6022 -1.2 -1.8 StbE replicon stabilization toxin compare
Pf6N2E2_1806 -1.2 -1.6 hypothetical protein compare
Pf6N2E2_4416 -1.2 -1.8 Tyrosine recombinase XerC compare
Pf6N2E2_2200 -1.2 -1.2 RNA polymerase sigma-54 factor RpoN compare
Pf6N2E2_3753 -1.2 -7.0 DamX, an inner membrane protein involved in bile resistance compare
Pf6N2E2_4159 -1.1 -2.9 Cytochrome c4 compare
Pf6N2E2_2180 -1.1 -1.9 Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109) compare
Pf6N2E2_464 -1.1 -1.1 Sensory histidine kinase QseC compare
Pf6N2E2_1136 -1.1 -1.7 Transcriptional regulator, TetR family compare
Pf6N2E2_5605 -1.1 -2.2 FxsA protein compare
Pf6N2E2_2513 -1.1 -2.5 UDP-glucose dehydrogenase (EC 1.1.1.22) compare
Pf6N2E2_5947 -1.1 -3.5 FIG146278: Maf/YceF/YhdE family protein compare
Pf6N2E2_1089 -1.1 -1.4 Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1) compare
Pf6N2E2_5520 -1.1 -3.8 Sensory box histidine kinase compare
Pf6N2E2_3397 -1.1 -1.5 Phage protein compare
Pf6N2E2_4454 -1.1 -3.5 Exopolyphosphatase (EC 3.6.1.11) compare
Pf6N2E2_3100 -1.1 -2.3 FIG00953063: hypothetical protein compare
Pf6N2E2_1140 -1.1 -1.9 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) compare
Pf6N2E2_2597 -1.1 -5.7 Flagellar regulatory protein FleQ compare
Pf6N2E2_2274 -1.1 -3.2 Soluble pyridine nucleotide transhydrogenase (EC 1.6.1.1) compare
Pf6N2E2_5663 -1.1 -2.7 L-Arginine ABC transporter, ATPase component (from data) compare
Pf6N2E2_1625 -1.1 -1.8 Ferric reductase (1.6.99.14) compare
Pf6N2E2_5235 -1.1 -4.7 Uracil phosphoribosyltransferase (EC 2.4.2.9) compare
Pf6N2E2_2156 -1.1 -1.7 Putative polyketide synthase (Fragment) compare
Pf6N2E2_3696 -1.1 -1.0 hypothetical protein compare
Pf6N2E2_827 -1.1 -2.2 probable dioxygenase compare
Pf6N2E2_3940 -1.0 -5.3 Phosphoserine phosphatase (EC 3.1.3.3) compare
Pf6N2E2_3634 -1.0 -1.0 Transporter compare
Pf6N2E2_2340 -1.0 -2.8 Transcriptional regulator, GntR family compare
Pf6N2E2_4647 -1.0 -6.1 Membrane-bound lytic murein transglycosylase A precursor (EC 3.2.1.-) compare
Pf6N2E2_1337 -1.0 -3.1 Cys regulon transcriptional activator CysB compare
Pf6N2E2_1347 -1.0 -2.3 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) compare
Pf6N2E2_1272 -1.0 -6.2 Acriflavin resistance plasma membrane protein conserved
Pf6N2E2_5816 -1.0 -1.3 Smr domain protein compare
Pf6N2E2_4418 -1.0 -0.7 Diaminopimelate epimerase (EC 5.1.1.7) compare
Pf6N2E2_423 -1.0 -1.2 Putative phosphatase YfbT compare
Pf6N2E2_2795 -1.0 -1.6 putative exported protein compare
Pf6N2E2_5733 -1.0 -2.8 NLP/P60 family protein compare
Pf6N2E2_4204 -1.0 -1.0 rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB compare
Pf6N2E2_4372 -1.0 -2.9 FIG00460773: hypothetical protein compare
Pf6N2E2_2519 -1.0 -1.1 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) compare
Pf6N2E2_3786 -1.0 -2.5 Twin-arginine translocation protein TatC compare
Pf6N2E2_4061 -1.0 -2.4 Rubredoxin compare
Pf6N2E2_3060 -1.0 -1.1 Outer membrane protein H precursor compare
Pf6N2E2_4540 -1.0 -1.8 hypothetical protein compare
Pf6N2E2_5944 -1.0 -3.0 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) compare
Pf6N2E2_4548 -1.0 -1.0 hypothetical protein compare
Pf6N2E2_238 -1.0 -1.5 hypothetical protein compare
Pf6N2E2_2852 -1.0 -4.4 GGDEF domain/EAL domain protein compare


Specific Phenotypes

For 11 genes in this experiment

For stress Sodium molybdate in Pseudomonas fluorescens FW300-N2E2

For stress Sodium molybdate across organisms