Experiment set6IT039 for Dechlorosoma suillum PS

Compare to:

Sodium pyruvate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2966 +1.4 1.5 cobalamin biosynthesis protein CbiG compare
Dsui_2599 +1.3 0.6 hypothetical protein compare
Dsui_1830 +1.3 1.1 Yip1 domain protein compare
Dsui_1976 +1.1 8.8 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_0084 +1.0 8.6 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain compare
Dsui_2891 +1.0 0.4 hemerythrin-like metal-binding domain-containing protein compare
Dsui_1110 +1.0 0.8 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_2003 +1.0 6.8 acetate--CoA ligase compare
Dsui_0076 +1.0 9.0 acetyltransferase, ribosomal protein N-acetylase compare
Dsui_0068 +1.0 9.7 methyltransferase family protein compare
Dsui_0079 +1.0 9.2 pseudaminic acid synthase compare
Dsui_0074 +1.0 8.8 hypothetical protein compare
Dsui_2611 +0.9 0.5 hypothetical protein compare
Dsui_3445 +0.9 6.0 hypothetical protein compare
Dsui_0066 +0.9 9.0 glycosyl transferase compare
Dsui_3028 +0.9 0.4 coenzyme F420-reducing hydrogenase, gamma subunit compare
Dsui_2496 +0.9 0.4 Membrane transport protein MerF compare
Dsui_0460 +0.9 2.2 ADP-heptose:LPS heptosyltransferase compare
Dsui_1291 +0.9 6.6 hypothetical protein compare
Dsui_2041 +0.9 3.3 enoyl-CoA hydratase/carnithine racemase compare
Dsui_0081 +0.9 7.1 pseudaminic acid CMP-transferase compare
Dsui_1495 +0.9 0.5 molecular chaperone (small heat shock protein) compare
Dsui_0083 +0.9 6.7 UDP-N-acetylglucosamine 4,6-dehydratase compare
Dsui_1875 +0.8 4.3 hypothetical protein compare
Dsui_1891 +0.8 0.5 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_0067 +0.8 8.2 cephalosporin hydroxylase compare
Dsui_0400 +0.8 5.0 putative nucleoside-diphosphate sugar epimerase compare
Dsui_1004 +0.8 1.6 conserved protein of DIM6/NTAB family compare
Dsui_0060 +0.8 5.9 GDP-D-mannose dehydratase compare
Dsui_0077 +0.8 6.5 putative PLP-dependent enzyme possibly involved in cell wall biogenesis compare
Dsui_0058 +0.8 5.5 Glycosyl transferase family 11 compare
Dsui_0070 +0.8 7.4 methyltransferase family protein compare
Dsui_1279 +0.8 6.3 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_1873 +0.8 4.4 transcriptional regulator compare
Dsui_0072 +0.8 6.6 CDP-glucose 4,6-dehydratase compare
Dsui_0061 +0.8 6.2 glycosyltransferase compare
Dsui_0057 +0.8 5.1 glycosyltransferase compare
Dsui_0461 +0.8 5.3 glycosyltransferase compare
Dsui_2609 +0.8 0.4 hypothetical protein compare
Dsui_2590 +0.8 1.6 Pilin accessory protein (PilO) compare
Dsui_1289 +0.8 5.8 hypothetical protein compare
Dsui_0266 +0.8 4.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0071 +0.7 5.7 dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme compare
Dsui_3446 +0.7 3.6 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase compare
Dsui_0949 +0.7 0.9 hypothetical protein compare
Dsui_0073 +0.7 6.5 glucose-1-phosphate cytidylyltransferase compare
Dsui_0080 +0.7 5.7 pseudaminic acid biosynthesis-associated protein PseG compare
Dsui_1107 +0.7 2.3 cAMP-binding protein compare
Dsui_1284 +0.7 4.8 hypothetical protein compare
Dsui_1292 +0.7 5.2 MSHA-type pilus biogenesis protein MshL compare
Dsui_0075 +0.7 5.5 hypothetical protein compare
Dsui_1283 +0.7 2.8 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_1280 +0.7 5.9 type II secretory pathway, component PulF compare
Dsui_1946 +0.7 4.6 putative N-acetylglucosaminyl transferase compare
Dsui_2069 +0.7 2.7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0078 +0.7 5.3 putative dehydrogenase compare
Dsui_2199 +0.7 2.1 bacterial nucleoid DNA-binding protein compare
Dsui_2068 +0.7 4.7 ABC-type metal ion transport system, ATPase component compare
Dsui_1496 +0.7 1.9 YfdX protein compare
Dsui_1285 +0.7 4.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2586 +0.7 0.9 type IV secretory pathway, VirB9 component compare
Dsui_2188 +0.7 5.3 Protein of unknown function (DUF3460) compare
Dsui_1862 +0.7 2.4 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2383 +0.7 0.4 hypothetical protein compare
Dsui_1837 +0.6 1.4 cation/cationic drug transporter compare
Dsui_1112 +0.6 0.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0462 +0.6 2.4 ADP-heptose:LPS heptosyltransferase compare
Dsui_2103 +0.6 4.8 hypothetical protein compare
Dsui_1956 +0.6 4.8 Rhodanese-related sulfurtransferase compare
Dsui_2137 +0.6 1.7 queuosine biosynthesis protein QueD compare
Dsui_1287 +0.6 5.6 hypothetical protein compare
Dsui_3330 +0.6 0.4 hypothetical protein compare
Dsui_0069 +0.6 5.5 nucleoside-diphosphate-sugar epimerase compare
Dsui_1281 +0.6 3.7 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2555 +0.6 0.3 Bacteriophage coat protein B compare
Dsui_2042 +0.6 0.4 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_3415 +0.6 4.6 FAD/FMN-dependent dehydrogenase compare
Dsui_1288 +0.6 3.6 hypothetical protein compare
Dsui_0464 +0.6 2.7 hypothetical protein compare
Dsui_0847 +0.6 4.2 16S rRNA (guanine(527)-N(7))-methyltransferase GidB compare
Dsui_2039 +0.6 4.1 OAH/OAS sulfhydrylase compare
Dsui_2061 +0.6 4.8 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_3444 +0.6 3.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
Dsui_1293 +0.6 3.1 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_2062 +0.6 1.3 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_2286 +0.6 0.3 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2242 +0.6 0.9 hypothetical protein compare
Dsui_2842 +0.6 0.4 radical SAM pair-associated protein compare
Dsui_0292 +0.5 1.2 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_1995 +0.5 3.6 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_0660 +0.5 4.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2853 +0.5 0.4 PPIC-type PPIASE family protein compare
Dsui_2131 +0.5 4.6 tRNA-Arg compare
Dsui_1937 +0.5 3.9 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_2023 +0.5 3.9 transcriptional regulator compare
Dsui_1058 +0.5 1.5 hypothetical protein compare
Dsui_2641 +0.5 0.6 putative multicopper oxidase compare
Dsui_1530 +0.5 0.4 hypothetical protein compare
Dsui_2608 +0.5 0.6 topoisomerase IA compare
Dsui_3414 +0.5 4.2 FAD/FMN-dependent dehydrogenase compare
Dsui_2696 +0.5 4.0 (protein-PII) uridylyltransferase compare
Dsui_2380 +0.5 1.7 isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase compare
Dsui_2066 +0.5 3.2 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Dsui_3327 +0.5 2.3 cytochrome b compare
Dsui_1377 +0.5 2.9 phasin family protein compare
Dsui_0228 +0.5 3.2 metalloendopeptidase-like membrane protein compare
Dsui_0215 +0.5 0.2 hypothetical protein compare
Dsui_3291 +0.5 3.6 hypothetical protein compare
Dsui_1908 +0.5 3.0 putative Fe-S-cluster redox enzyme compare
Dsui_2126 +0.5 0.9 alanine dehydrogenase compare
Dsui_0398 +0.5 3.0 UDP-glucose-4-epimerase compare
Dsui_2407 +0.5 1.5 beta-propeller domain-containing protein, methanol dehydrogenase compare
Dsui_3247 +0.5 3.8 Protein of unknown function (DUF2788) compare
Dsui_3383 +0.5 2.6 cAMP-binding protein compare
Dsui_2180 +0.5 2.5 hypothetical protein compare
Dsui_1286 +0.5 2.9 hypothetical protein compare
Dsui_3154 +0.5 3.1 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_2164 +0.5 0.9 signal transduction histidine kinase compare
Dsui_1690 +0.5 2.6 cAMP-binding protein compare
Dsui_1869 +0.5 3.7 hypothetical protein compare
Dsui_0604 +0.5 3.2 pilus retraction protein PilT compare
Dsui_3413 +0.5 2.2 Fe-S oxidoreductase compare
Dsui_2573 +0.5 1.4 hypothetical protein compare
Dsui_1294 +0.5 3.3 hypothetical protein compare
Dsui_2067 +0.5 3.2 ABC-type metal ion transport system, permease component compare
Dsui_2276 +0.5 0.9 Protein of unknown function (DUF2975) compare
Dsui_1881 +0.5 4.1 methyl-accepting chemotaxis protein compare
Dsui_1541 +0.5 3.4 cytochrome c553 compare
Dsui_2600 +0.5 0.3 hypothetical protein compare
Dsui_1454 +0.5 0.5 Rhodanese-like protein,cyclic nucleotide-binding protein compare
Dsui_2889 +0.5 3.6 parvulin-like peptidyl-prolyl isomerase compare
Dsui_0059 +0.5 2.3 glycosyl transferase compare
Dsui_1827 +0.5 1.6 hypothetical protein compare
Dsui_1646 +0.5 2.1 cAMP-binding protein compare
Dsui_1540 +0.5 3.5 NAD(FAD)-dependent dehydrogenase compare
Dsui_1766 +0.5 1.6 hypothetical protein compare
Dsui_2235 +0.5 2.6 hypothetical protein compare
Dsui_0796 +0.5 1.2 hypothetical protein compare
Dsui_0290 +0.5 2.9 SSS sodium solute transporter compare
Dsui_1016 +0.5 1.7 tRNA (guanine-N(7)-)-methyltransferase compare
Dsui_0657 +0.5 3.3 methyl-accepting chemotaxis protein compare
Dsui_2004 +0.4 0.3 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_3090 +0.4 2.1 hypothetical protein compare
Dsui_1649 +0.4 0.9 universal stress protein UspA-like protein compare
Dsui_2606 +0.4 0.3 soluble lytic murein transglycosylase-like protein compare
Dsui_0956 +0.4 0.3 nitrogenase molybdenum-iron protein alpha chain compare
Dsui_1333 +0.4 3.8 Integral membrane protein CcmA involved in cell shape determination compare
Dsui_2156 +0.4 3.7 methyl-accepting chemotaxis protein compare
Dsui_0656 +0.4 3.8 chemotaxis protein histidine kinase-like protein compare
Dsui_1460 +0.4 3.5 cAMP-binding protein compare
Dsui_1482 +0.4 1.7 hypothetical protein compare
Dsui_1979 +0.4 2.5 metal-dependent hydrolase, beta-lactamase superfamily I compare
Dsui_2734 +0.4 2.9 bacterioferritin-associated ferredoxin compare
Dsui_2150 +0.4 3.0 hypothetical protein compare
Dsui_2159 +0.4 2.8 methyl-accepting chemotaxis protein compare
Dsui_2058 +0.4 2.8 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_1829 +0.4 1.2 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1629 +0.4 1.4 Cbb3-type cytochrome oxidase, subunit 3 compare
Dsui_1376 +0.4 3.6 phasin family protein compare
Dsui_1290 +0.4 1.7 hypothetical protein compare
Dsui_3196 +0.4 3.0 FimV N-terminal domain protein compare
Dsui_0680 +0.4 1.8 short-chain dehydrogenase of unknown substrate specificity compare
Dsui_2368 +0.4 2.4 serine O-acetyltransferase compare
Dsui_2642 +0.4 0.3 outer membrane protein compare
Dsui_1282 +0.4 0.9 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_0988 +0.4 2.1 hypothetical protein compare
Dsui_0024 +0.4 2.4 cytochrome c556 compare
Dsui_2305 +0.4 2.3 electron transfer flavoprotein, beta subunit compare
Dsui_2037 +0.4 0.4 putative alpha/beta hydrolase compare
Dsui_3250 +0.4 3.4 acetylornithine/succinylornithine aminotransferase compare
Dsui_2499 +0.4 0.2 MerE protein compare
Dsui_2746 +0.4 3.4 ATP-binding cassette protein, ChvD family compare
Dsui_1003 +0.4 2.9 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_3224 +0.4 0.6 pterin-4a-carbinolamine dehydratase compare
Dsui_0675 +0.4 1.4 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2070 +0.4 2.8 transcriptional regulator compare
Dsui_2331 +0.4 1.5 heat shock protein compare
Dsui_3382 +0.4 1.5 universal stress protein UspA-like protein compare
Dsui_0322 +0.4 2.6 acyl-CoA hydrolase compare
Dsui_2064 +0.4 0.4 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Dsui_2544 +0.4 2.2 disulfide bond chaperone compare
Dsui_1318 +0.4 2.1 prepilin signal peptidase PulO-like peptidase compare
Dsui_1901 +0.4 3.0 peroxiredoxin compare
Dsui_1844 +0.4 0.2 phosphate transport regulator related to PhoU compare
Dsui_1011 +0.4 2.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2059 +0.4 2.4 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_1971 +0.4 2.5 RNA polymerase sigma factor RpoS compare
Dsui_1393 +0.4 0.2 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2256 +0.4 3.1 flavodoxin reductase family protein compare
Dsui_1972 +0.4 1.8 lytic murein transglycosylase B compare
Dsui_2771 +0.4 2.7 hypothetical protein compare
Dsui_2000 +0.4 3.0 hypothetical protein compare
Dsui_2243 +0.4 0.7 hypothetical protein compare
Dsui_0700 +0.4 1.6 psiF repeat protein compare
Dsui_1117 +0.4 1.8 hemerythrin-like metal-binding domain-containing protein compare
Dsui_2720 +0.4 1.9 tRNA pseudouridine 55 synthase compare
Dsui_2831 +0.4 3.5 hypothetical protein compare
Dsui_1858 +0.4 3.3 transcriptional regulator compare
Dsui_1918 +0.4 1.9 TIGR03549 family protein compare
Dsui_1987 +0.4 2.7 putative permease compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium pyruvate across organisms