Experiment set6IT038 for Dechlorosoma suillum PS

Compare to:

Sodium D,L-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -9.4 -8.0 phosphotransferase system HPr (HPr) family protein compare
Dsui_1576 -5.7 -3.2 dihydrolipoamide dehydrogenase compare
Dsui_0742 -5.7 -10.8 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0423 -4.9 -9.4 putative permease compare
Dsui_3139 -4.8 -3.3 outer membrane assembly lipoprotein YfgL compare
Dsui_2816 -4.4 -5.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0025 -3.8 -2.5 hypothetical protein compare
Dsui_1094 -3.8 -3.5 shikimate kinase compare
Dsui_2651 -3.8 -2.1 ankyrin repeat-containing protein compare
Dsui_0520 -3.7 -19.4 transcriptional regulator compare
Dsui_1445 -3.7 -3.6 succinyl-CoA synthetase, beta subunit compare
Dsui_1577 -3.7 -3.5 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1578 -3.7 -5.6 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_2433 -3.6 -14.5 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_1446 -3.3 -3.9 succinyl-CoA synthetase, alpha subunit compare
Dsui_1581 -3.3 -4.1 response regulator compare
Dsui_0174 -3.2 -2.1 hypothetical protein compare
Dsui_1884 -3.2 -2.2 histidine kinase compare
Dsui_1674 -3.0 -2.0 EAL domain-containing protein compare
Dsui_1394 -3.0 -2.8 hypothetical protein compare
Dsui_1045 -2.9 -2.0 hypothetical protein compare
Dsui_3099 -2.9 -2.0 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_1529 -2.9 -6.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2717 -2.9 -4.9 RNA polymerase-binding protein DksA compare
Dsui_1852 -2.9 -1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3158 -2.8 -3.3 Na+/H+ dicarboxylate symporter compare
Dsui_2903 -2.8 -1.9 methyltransferase family protein compare
Dsui_0023 -2.8 -2.7 acetylornithine/succinylornithine aminotransferase compare
Dsui_1819 -2.8 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1978 -2.8 -3.5 putative lipoprotein compare
Dsui_1490 -2.8 -2.6 DNA-binding protein, excisionase family compare
Dsui_1893 -2.8 -1.6 putative membrane protein compare
Dsui_1599 -2.8 -17.6 putative enzyme of heme biosynthesis compare
Dsui_0171 -2.7 -1.9 putative transcriptional regulator compare
Dsui_0417 -2.7 -1.8 gamma-glutamyltransferase compare
Dsui_0837 -2.7 -2.6 tRNA modification GTPase TrmE compare
Dsui_1970 -2.7 -9.8 metalloendopeptidase-like membrane protein compare
Dsui_1408 -2.7 -0.9 NifZ domain-containing protein compare
Dsui_1825 -2.6 -1.8 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_1097 -2.6 -11.8 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_1096 -2.6 -19.3 glutamate synthase family protein compare
Dsui_3448 -2.6 -1.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3465 -2.5 -1.7 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_0487 -2.5 -1.6 hemerythrin HHE cation binding domain-containing protein compare
Dsui_1059 -2.5 -2.2 thiamine monophosphate synthase compare
Dsui_1396 -2.5 -1.7 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_0870 -2.5 -17.3 putative membrane protein compare
Dsui_1242 -2.5 -2.4 hypothetical protein compare
Dsui_3469 -2.5 -1.5 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2027 -2.4 -1.7 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_1620 -2.4 -1.6 PAP2 (acid phosphatase) superfamily protein compare
Dsui_1619 -2.4 -2.3 putative membrane-associated, metal-dependent hydrolase compare
Dsui_1297 -2.4 -7.4 biotin synthetase compare
Dsui_0116 -2.4 -1.6 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_1857 -2.4 -1.5 putative permease, DMT superfamily compare
Dsui_0618 -2.4 -1.6 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_2893 -2.3 -3.1 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1600 -2.3 -11.7 putative enzyme of heme biosynthesis compare
Dsui_3114 -2.3 -1.5 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_1442 -2.3 -1.5 putative efflux protein, MATE family compare
Dsui_3026 -2.3 -1.3 hydrogenase maturation protease compare
Dsui_3456 -2.3 -1.5 hypothetical protein compare
Dsui_1669 -2.3 -1.4 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0209 -2.3 -1.5 hypothetical protein compare
Dsui_3117 -2.3 -1.5 hypothetical protein compare
Dsui_0253 -2.3 -1.5 HIRAN domain-containing protein compare
Dsui_3077 -2.2 -1.5 hypothetical protein compare
Dsui_3366 -2.2 -1.5 glycerophosphoryl diester phosphodiesterase compare
Dsui_3478 -2.2 -1.0 hypothetical protein compare
Dsui_0692 -2.2 -3.3 hypothetical protein compare
Dsui_3006 -2.2 -1.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_2866 -2.2 -1.5 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_3115 -2.2 -1.0 hypothetical protein compare
Dsui_1311 -2.2 -1.4 hypothetical protein compare
Dsui_3178 -2.2 -1.5 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_3229 -2.2 -2.2 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_1368 -2.2 -1.5 hypothetical protein compare
Dsui_0033 -2.2 -2.0 Zn-dependent protease with chaperone function compare
Dsui_2884 -2.2 -7.2 dethiobiotin synthase compare
Dsui_1660 -2.1 -1.5 outer membrane cobalamin receptor protein compare
Dsui_2920 -2.1 -1.8 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0431 -2.1 -2.1 putative permease, DMT superfamily compare
Dsui_2342 -2.1 -2.0 multidrug resistance efflux pump compare
Dsui_3231 -2.1 -2.0 hypothetical protein compare
Dsui_0297 -2.1 -2.0 sugar fermentation stimulation protein compare
Dsui_1165 -2.1 -1.4 Ni,Fe-hydrogenase I large subunit compare
Dsui_2352 -2.1 -1.4 hypothetical protein compare
Dsui_1618 -2.1 -1.4 signal transduction histidine kinase compare
Dsui_2921 -2.1 -2.3 isochorismate synthase family protein compare
Dsui_1296 -2.1 -1.4 putative amidophosphoribosyltransferase compare
Dsui_0532 -2.1 -1.4 cob(I)alamin adenosyltransferase compare
Dsui_0846 -2.0 -4.5 glucose-inhibited division protein A compare
Dsui_1659 -2.0 -1.4 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0691 -2.0 -1.1 hypothetical protein compare
Dsui_0620 -2.0 -1.4 Fe2+-dicitrate sensor, membrane component compare
Dsui_0733 -2.0 -1.4 hypothetical protein compare
Dsui_0558 -2.0 -1.4 tetratricopeptide repeat protein compare
Dsui_2076 -2.0 -1.4 cytochrome c, mono- and diheme variants family compare
Dsui_3343 -2.0 -1.3 putative hydrolase of the alpha/beta-hydrolase fold protein compare
Dsui_2881 -2.0 -9.2 8-amino-7-oxononanoate synthase compare
Dsui_0765 -2.0 -1.4 conserved hypothetical protein, proteobacterial compare
Dsui_2330 -2.0 -2.1 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3377 -2.0 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2339 -2.0 -1.3 putative domain HDIG-containing protein compare
Dsui_1149 -2.0 -1.9 Zn-dependent protease with chaperone function compare
Dsui_0897 -2.0 -1.3 RND family efflux transporter, MFP subunit compare
Dsui_3524 -2.0 -9.9 signal transduction histidine kinase compare
Dsui_2294 -2.0 -1.3 phasin family protein compare
Dsui_0510 -2.0 -1.3 ferredoxin-type protein, NapH/MauN family compare
Dsui_2772 -2.0 -1.7 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_2127 -2.0 -1.1 flavodoxin reductase family protein compare
Dsui_0392 -2.0 -1.3 diacylglycerol kinase compare
Dsui_0745 -2.0 -5.6 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_0553 -1.9 -1.3 putative nitrogen fixation protein compare
Dsui_2228 -1.9 -1.3 Zn-dependent alcohol dehydrogenase compare
Dsui_1840 -1.9 -1.3 hypothetical protein compare
Dsui_3125 -1.9 -2.3 cytochrome c, mono- and diheme variants family compare
Dsui_0436 -1.9 -1.3 dienelactone hydrolase-like enzyme compare
Dsui_0306 -1.9 -1.3 putative permease compare
Dsui_3259 -1.9 -1.3 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_2080 -1.9 -1.3 response regulator compare
Dsui_0866 -1.9 -4.4 hypothetical protein compare
Dsui_0176 -1.9 -1.3 ribosome modulation factor compare
Dsui_1002 -1.9 -1.7 prolyl oligopeptidase family protein compare
Dsui_0653 -1.9 -1.3 putative SAM-dependent methyltransferase compare
Dsui_2341 -1.9 -1.3 ABC-type multidrug transport system, ATPase component compare
Dsui_2895 -1.9 -1.3 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_0871 -1.9 -0.6 hypothetical protein compare
Dsui_1888 -1.8 -1.2 putative domain HDIG-containing protein compare
Dsui_3393 -1.8 -9.4 Kef-type K+ transport system, membrane component compare
Dsui_2975 -1.8 -1.8 TonB-dependent siderophore receptor compare
Dsui_0313 -1.8 -1.3 putative transcriptional regulator compare
Dsui_1433 -1.8 -0.8 chemotaxis protein compare
Dsui_3523 -1.8 -8.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3298 -1.8 -10.5 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_3371 -1.8 -1.7 putative oxidoreductase, aryl-alcohol dehydrogenase like protein compare
Dsui_3351 -1.8 -1.2 cytochrome c peroxidase compare
Dsui_2880 -1.8 -10.6 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_1160 -1.8 -1.2 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1675 -1.8 -1.1 hypothetical protein compare
Dsui_3157 -1.8 -1.2 Fatty acid cis/trans isomerase (CTI) compare
Dsui_2518 -1.8 -2.0 hypothetical protein compare
Dsui_1817 -1.8 -1.2 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_1133 -1.8 -1.7 hypothetical protein compare
Dsui_2935 -1.8 -1.2 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1559 -1.8 -1.2 hypothetical protein compare
Dsui_3008 -1.8 -1.2 hydrogenase expression/formation protein compare
Dsui_3441 -1.8 -1.7 cation/multidrug efflux pump compare
Dsui_2384 -1.8 -1.2 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_0225 -1.8 -1.2 hypothetical protein compare
Dsui_2348 -1.8 -2.7 hypothetical protein compare
Dsui_3120 -1.8 -1.2 cAMP-binding protein compare
Dsui_0200 -1.8 -1.1 hypothetical protein compare
Dsui_3477 -1.8 -1.2 PAS domain S-box compare
Dsui_0725 -1.8 -5.0 putative hydrolase of the alpha/beta superfamily compare
Dsui_1671 -1.8 -3.1 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_0954 -1.8 -1.2 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_2883 -1.8 -7.1 biotin biosynthesis protein BioC compare
Dsui_2033 -1.8 -1.2 transcriptional regulator compare
Dsui_0513 -1.8 -3.5 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1111 -1.8 -1.2 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_0838 -1.8 -1.2 hypothetical protein compare
Dsui_1605 -1.8 -1.7 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_2969 -1.8 -2.0 uroporphyrin-III C-methyltransferase compare
Dsui_0029 -1.8 -1.2 putative pyrophosphatase compare
Dsui_0110 -1.8 -1.2 Histidine kinase compare
Dsui_1388 -1.8 -1.2 hypothetical protein compare
Dsui_0411 -1.8 -2.6 ABC-type dipeptide transport system, periplasmic component compare
Dsui_3226 -1.7 -2.5 putative SAM-dependent methyltransferase compare
Dsui_2329 -1.7 -1.2 putative dehydrogenase compare
Dsui_1833 -1.7 -1.2 nitrate transport ATP-binding subunits C and D compare
Dsui_2122 -1.7 -1.6 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_0747 -1.7 -7.4 glutamate--cysteine ligase compare
Dsui_2919 -1.7 -1.1 addiction module antidote protein, HigA family compare
Dsui_2237 -1.7 -2.0 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_2775 -1.7 -1.1 hypothetical protein compare
Dsui_0878 -1.7 -1.2 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_0316 -1.7 -1.6 hypothetical protein compare
Dsui_2312 -1.7 -1.6 3-hydroxybutyrate dehydrogenase compare
Dsui_0619 -1.7 -1.2 TonB-dependent siderophore receptor compare
Dsui_3149 -1.7 -1.1 electron transfer flavoprotein, alpha subunit compare
Dsui_2072 -1.7 -1.2 Pirin-related protein compare
Dsui_3408 -1.7 -2.2 hypothetical protein compare
Dsui_3392 -1.7 -10.5 carboxylate-amine ligase, YbdK family compare
Dsui_3151 -1.7 -0.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3257 -1.7 -2.9 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_1739 -1.7 -1.6 flagellar basal-body P-ring protein compare
Dsui_3443 -1.7 -1.1 RND family efflux transporter, MFP subunit compare
Dsui_2740 -1.7 -1.1 putative integral membrane protein compare
Dsui_3361 -1.7 -1.1 hypothetical protein compare
Dsui_2454 -1.7 -8.7 Positive regulator of sigma E activity compare
Dsui_1251 -1.7 -0.9 acylphosphatase compare
Dsui_3094 -1.7 -1.1 putative HD superfamily hydrolase compare
Dsui_0574 -1.7 -1.1 flavin-dependent dehydrogenase compare
Dsui_0943 -1.7 -1.1 nitrogenase cofactor biosynthesis protein NifB compare
Dsui_1198 -1.7 -5.4 apolipoprotein N-acyltransferase compare
Dsui_1676 -1.7 -1.1 biopolymer transport protein compare
Dsui_2429 -1.7 -1.6 putative permease compare
Dsui_2238 -1.7 -2.1 ABC-type dipeptide transport system, periplasmic component compare
Dsui_1610 -1.7 -1.1 Protein of unknown function (DUF3079) compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium D,L-Lactate across organisms