Experiment set6IT037 for Klebsiella michiganensis M5al

Compare to:

Sodium nitrate nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20350 -9.1 -6.3 amidophosphoribosyltransferase compare
BWI76_RS09760 -8.6 -5.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS05835 -7.4 -5.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS24285 -7.3 -8.7 cystathionine beta-lyase compare
BWI76_RS00385 -7.1 -10.2 nitrogen assimilation regulatory protein compare
BWI76_RS09755 -7.1 -6.9 phosphoserine transaminase compare
BWI76_RS20965 -7.1 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04470 -7.0 -11.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS11965 -6.9 -5.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS11850 -6.7 -11.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00390 -6.7 -6.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS04465 -6.7 -7.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS07070 -6.6 -6.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18940 -6.6 -6.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS01210 -6.5 -4.6 tyrosine recombinase XerC compare
BWI76_RS00845 -6.5 -10.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS18925 -6.5 -8.1 histidinol dehydrogenase compare
BWI76_RS00805 -6.5 -5.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS02995 -6.5 -10.4 aspartate carbamoyltransferase compare
BWI76_RS18950 -6.4 -6.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04255 -6.3 -12.1 threonine synthase compare
BWI76_RS23920 -6.2 -8.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS05015 -6.2 -4.2 transcriptional regulator compare
BWI76_RS00785 -6.2 -9.8 cystathionine gamma-synthase compare
BWI76_RS04250 -6.1 -9.3 homoserine kinase compare
BWI76_RS22755 -6.1 -8.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01610 -6.1 -6.0 phosphoribosylamine--glycine ligase compare
BWI76_RS23220 -6.0 -9.0 amino-acid N-acetyltransferase compare
BWI76_RS00855 -6.0 -9.3 argininosuccinate lyase compare
BWI76_RS04670 -6.0 -11.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00980 -5.9 -12.8 PLP-dependent threonine dehydratase compare
BWI76_RS26055 -5.9 -10.7 siroheme synthase compare
BWI76_RS22805 -5.8 -13.4 GTP diphosphokinase compare
BWI76_RS21475 -5.8 -6.3 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS25315 -5.7 -12.0 glutamate synthase large subunit compare
BWI76_RS04245 -5.7 -17.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04665 -5.7 -23.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01655 -5.7 -9.3 homoserine O-succinyltransferase compare
BWI76_RS00965 -5.5 -1.9 acetolactate synthase 2 small subunit compare
BWI76_RS00850 -5.5 -12.6 acetylglutamate kinase compare
BWI76_RS21265 -5.5 -12.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00400 -5.4 -3.2 glutamine synthetase compare
BWI76_RS20895 -5.4 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04685 -5.4 -11.5 putative leucine operon leader peptide compare
BWI76_RS00835 -5.4 -14.7 phosphoenolpyruvate carboxylase compare
BWI76_RS11840 -5.3 -3.9 tryptophan synthase subunit alpha compare
BWI76_RS25320 -5.3 -10.7 glutamate synthase compare
BWI76_RS18935 -5.3 -7.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04160 -5.3 -4.7 phosphoserine phosphatase compare
BWI76_RS01615 -5.2 -9.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04675 -5.2 -5.6 3-isopropylmalate dehydrogenase compare
BWI76_RS11860 -5.2 -10.2 anthranilate synthase component I compare
BWI76_RS09645 -5.1 -1.8 thioredoxin-disulfide reductase compare
BWI76_RS20355 -5.1 -3.9 colicin V production protein compare
BWI76_RS23240 -5.0 -3.5 exonuclease V subunit gamma compare
BWI76_RS27385 -5.0 -10.0 orotate phosphoribosyltransferase compare
BWI76_RS09910 -5.0 -16.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11855 -4.9 -4.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00990 -4.9 -7.4 ketol-acid reductoisomerase compare
BWI76_RS18920 -4.8 -5.0 ATP phosphoribosyltransferase compare
BWI76_RS23365 -4.7 -5.7 LysR family transcriptional regulator compare
BWI76_RS23230 -4.7 -3.2 exodeoxyribonuclease V subunit beta compare
BWI76_RS11845 -4.5 -2.4 tryptophan synthase subunit beta compare
BWI76_RS04645 -4.5 -4.8 3-dehydroquinase compare
BWI76_RS00975 -4.5 -6.8 dihydroxy-acid dehydratase compare
BWI76_RS18930 -4.4 -3.3 histidinol-phosphate transaminase compare
BWI76_RS03010 -4.4 -5.7 ornithine carbamoyltransferase compare
BWI76_RS16235 -4.4 -4.9 membrane protein compare
BWI76_RS05840 -4.4 -5.1 glutamate 5-kinase compare
BWI76_RS17380 -4.4 -7.1 nitrate transporter component conserved
BWI76_RS08385 -4.3 -3.6 citrate (Si)-synthase compare
BWI76_RS25115 -4.3 -6.2 argininosuccinate synthase compare
BWI76_RS17365 -4.3 -13.6 Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data) conserved
BWI76_RS07065 -4.3 -7.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS10990 -4.2 -4.3 dihydroorotase compare
BWI76_RS06525 -4.1 -7.3 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS25645 -4.1 -8.8 shikimate dehydrogenase compare
BWI76_RS22765 -4.1 -12.3 sulfite reductase subunit alpha compare
BWI76_RS23360 -4.1 -4.9 diaminopimelate decarboxylase compare
BWI76_RS09660 -4.1 -2.8 DNA translocase FtsK compare
BWI76_RS27390 -4.1 -5.1 ribonuclease PH compare
BWI76_RS17385 -3.9 -8.8 nitrate regulatory protein conserved
BWI76_RS23070 -3.8 -6.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
BWI76_RS05200 -3.6 -4.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04680 -3.6 -8.7 2-isopropylmalate synthase compare
BWI76_RS22760 -3.5 -7.3 sulfite reductase subunit beta compare
BWI76_RS17370 -3.5 -1.4 nitrate transporter NasD compare
BWI76_RS18955 -3.5 -5.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS04240 -3.4 -1.9 thr operon leader peptide compare
BWI76_RS26085 -3.4 -2.3 3-dehydroquinate synthase compare
BWI76_RS02735 -3.3 -6.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS21465 -3.3 -2.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS09615 -3.1 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS01275 -3.1 -10.1 LysR family transcriptional regulator compare
BWI76_RS22690 -3.1 -3.0 adenylyl-sulfate kinase compare
BWI76_RS25335 -3.0 -3.8 stringent starvation protein A compare
BWI76_RS17375 -3.0 -2.7 nitrate ABC transporter, permease protein compare
BWI76_RS20435 -3.0 -1.4 chorismate synthase compare
BWI76_RS02530 -2.9 -4.0 tRNA dimethylallyltransferase compare
BWI76_RS09655 -2.8 -5.7 leucine-responsive regulatory protein compare
BWI76_RS08925 -2.7 -5.6 DNA-binding protein YbiB conserved
BWI76_RS21140 -2.6 -3.5 molecular chaperone HscA compare
BWI76_RS25285 -2.5 -1.7 HPr family phosphocarrier protein compare
BWI76_RS06535 -2.5 -7.7 endopeptidase La compare
BWI76_RS01800 -2.4 -6.2 glucose-6-phosphate isomerase compare
BWI76_RS20640 -2.3 -6.0 cysteine synthase A compare
BWI76_RS08180 -2.3 -7.4 asparagine synthase B compare
BWI76_RS00345 -2.2 -4.9 protein disulfide oxidoreductase DsbA compare
BWI76_RS17720 -2.2 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS25960 -2.1 -4.7 NUDIX hydrolase compare
BWI76_RS06605 -2.0 -5.4 ammonium transporter conserved
BWI76_RS00985 -2.0 -5.2 transcriptional regulator IlvY compare
BWI76_RS25065 -2.0 -5.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS11700 -2.0 -1.8 hypothetical protein compare
BWI76_RS12790 -1.9 -1.4 lactate dehydrogenase compare
BWI76_RS24600 -1.9 -5.6 dihydroxyacetone kinase compare
BWI76_RS04510 -1.9 -3.0 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS20650 -1.8 -2.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS12090 -1.7 -2.4 HNH endonuclease compare
BWI76_RS19690 -1.7 -3.4 LysR family transcriptional regulator compare
BWI76_RS26000 -1.7 -6.1 aspartate aminotransferase family protein compare
BWI76_RS01200 -1.7 -2.0 diaminopimelate epimerase compare
BWI76_RS20785 -1.7 -1.4 ethanolamine utilization protein EutJ compare
BWI76_RS09970 -1.7 -3.7 porin OmpA compare
BWI76_RS09610 -1.6 -3.7 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS24595 -1.6 -9.1 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS13965 -1.6 -3.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS24580 -1.6 -7.2 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS13560 -1.6 -1.4 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS15835 -1.5 -1.0 hypothetical protein compare
BWI76_RS20440 -1.5 -1.5 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS08525 -1.5 -2.7 colicin transporter compare
BWI76_RS20490 -1.5 -2.7 hypothetical protein compare
BWI76_RS15825 -1.5 -1.3 hypothetical protein compare
BWI76_RS22645 -1.5 -3.5 RNA polymerase sigma factor RpoS compare
BWI76_RS04305 -1.4 -1.4 molecular chaperone DnaJ compare
BWI76_RS15990 -1.4 -4.0 serine protease compare
BWI76_RS01385 -1.4 -2.3 potassium transporter compare
BWI76_RS00380 -1.4 -8.1 oxygen-independent coproporphyrinogen III oxidase compare
BWI76_RS15620 -1.4 -2.1 hypothetical protein compare
BWI76_RS05120 -1.3 -8.5 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS15840 -1.3 -2.5 prophage protein compare
BWI76_RS01565 -1.3 -1.8 NADH pyrophosphatase compare
BWI76_RS06530 -1.3 -3.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS23270 -1.3 -6.3 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS20970 -1.2 -1.5 phosphoribosylglycinamide formyltransferase compare
BWI76_RS22705 -1.2 -6.9 siroheme synthase compare
BWI76_RS09650 -1.2 -4.2 hypothetical protein compare
BWI76_RS23055 -1.2 -1.3 cobalamin biosynthesis protein CbiG compare
BWI76_RS00140 -1.2 -1.0 phosphate transport system regulator PhoU compare
BWI76_RS13545 -1.2 -1.4 N-acetyltransferase compare
BWI76_RS02990 -1.2 -3.1 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS07725 -1.2 -1.3 iron-enterobactin transporter permease compare
BWI76_RS22120 -1.2 -4.0 glutamate--cysteine ligase compare
BWI76_RS23480 -1.2 -7.2 EAL domain-containing protein compare
BWI76_RS24465 -1.2 -6.5 adenylate cyclase compare
BWI76_RS15810 -1.2 -2.1 hypothetical protein compare
BWI76_RS13595 -1.2 -3.2 transcriptional regulator compare
BWI76_RS11300 -1.2 -1.1 cupin compare
BWI76_RS25480 -1.2 -2.7 ribonuclease E/G compare
BWI76_RS25070 -1.2 -1.4 hypothetical protein compare
BWI76_RS00960 -1.1 -5.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS14075 -1.1 -0.9 TetR family transcriptional regulator compare
BWI76_RS13590 -1.1 -2.2 hypothetical protein compare
BWI76_RS24585 -1.1 -2.6 glycerol dehydrogenase compare
BWI76_RS23265 -1.1 -3.4 hypothetical protein compare
BWI76_RS26620 -1.1 -1.1 Fe-S biogenesis protein NfuA compare
BWI76_RS10575 -1.1 -1.4 polar amino acid ABC transporter permease compare
BWI76_RS16935 -1.1 -1.3 shikimate dehydrogenase compare
BWI76_RS20695 -1.1 -3.2 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS14435 -1.0 -1.6 glutamine ABC transporter ATP-binding protein compare
BWI76_RS02580 -1.0 -1.4 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS11610 -1.0 -1.1 glutamate dehydrogenase compare
BWI76_RS21795 -1.0 -2.5 EAL domain-containing protein compare
BWI76_RS18605 -1.0 -1.1 oxidoreductase molybdopterin-binding protein compare
BWI76_RS11040 -1.0 -1.9 ribonuclease E compare
BWI76_RS01280 -1.0 -6.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS08580 -1.0 -3.3 quinolinate synthetase compare
BWI76_RS03295 -1.0 -1.5 transposase compare
BWI76_RS20380 -1.0 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS04270 -1.0 -3.7 transaldolase compare
BWI76_RS21370 -1.0 -1.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS04845 -1.0 -6.1 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS05450 -1.0 -1.2 ribonuclease HI compare
BWI76_RS27440 -1.0 -2.9 DNA helicase RecG compare
BWI76_RS20360 -1.0 -1.0 cell division protein DedD compare
BWI76_RS01630 -1.0 -1.0 16S ribosomal RNA compare
BWI76_RS20155 -1.0 -1.7 NADH-quinone oxidoreductase subunit I compare
BWI76_RS25280 -1.0 -1.6 RNase adaptor protein RapZ compare
BWI76_RS25425 -0.9 -1.8 arginine repressor compare
BWI76_RS21480 -0.9 -2.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS16275 -0.9 -1.7 fumarate hydratase FumA compare
BWI76_RS02410 -0.9 -1.1 EF-P beta-lysylation protein EpmB compare
BWI76_RS21450 -0.9 -2.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS18755 -0.9 -1.1 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS26440 -0.9 -1.4 hypothetical protein compare
BWI76_RS12145 -0.9 -1.5 hypothetical protein compare
BWI76_RS00940 -0.9 -3.8 transcriptional regulator HdfR compare
BWI76_RS14390 -0.9 -1.1 hypothetical protein compare
BWI76_RS08210 -0.9 -2.0 N-acetylglucosamine-6-phosphate deacetylase compare


Specific Phenotypes

For 6 genes in this experiment

For nitrogen source Sodium nitrate in Klebsiella michiganensis M5al

For nitrogen source Sodium nitrate across organisms