Experiment set6IT036 for Dechlorosoma suillum PS

Compare to:

Sodium D-Lactate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -10.5 -9.0 phosphotransferase system HPr (HPr) family protein compare
Dsui_1581 -5.9 -3.6 response regulator compare
Dsui_1576 -5.4 -3.3 dihydrolipoamide dehydrogenase compare
Dsui_0742 -5.3 -10.5 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0423 -5.1 -9.2 putative permease compare
Dsui_2816 -5.0 -4.9 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3415 -4.7 -18.0 FAD/FMN-dependent dehydrogenase compare
Dsui_3413 -4.3 -15.8 Fe-S oxidoreductase compare
Dsui_3139 -4.2 -4.0 outer membrane assembly lipoprotein YfgL compare
Dsui_3414 -4.1 -27.4 FAD/FMN-dependent dehydrogenase compare
Dsui_1978 -3.9 -2.2 putative lipoprotein compare
Dsui_2651 -3.6 -2.2 ankyrin repeat-containing protein compare
Dsui_2717 -3.6 -6.3 RNA polymerase-binding protein DksA compare
Dsui_1577 -3.5 -2.0 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0968 -3.5 -2.3 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_1094 -3.4 -3.5 shikimate kinase compare
Dsui_0520 -3.3 -16.9 transcriptional regulator compare
Dsui_1529 -3.1 -7.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2433 -3.1 -13.7 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_1446 -3.0 -4.1 succinyl-CoA synthetase, alpha subunit compare
Dsui_1096 -3.0 -19.7 glutamate synthase family protein compare
Dsui_1490 -3.0 -2.0 DNA-binding protein, excisionase family compare
Dsui_1097 -3.0 -10.7 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_0174 -3.0 -2.0 hypothetical protein compare
Dsui_1970 -2.9 -8.9 metalloendopeptidase-like membrane protein compare
Dsui_0025 -2.9 -2.7 hypothetical protein compare
Dsui_1578 -2.9 -7.1 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1674 -2.8 -1.9 EAL domain-containing protein compare
Dsui_1599 -2.7 -18.5 putative enzyme of heme biosynthesis compare
Dsui_3099 -2.7 -1.8 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_1852 -2.7 -1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1819 -2.7 -1.4 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1045 -2.7 -1.8 hypothetical protein compare
Dsui_0023 -2.7 -2.5 acetylornithine/succinylornithine aminotransferase compare
Dsui_0870 -2.6 -15.8 putative membrane protein compare
Dsui_2772 -2.6 -1.7 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_1893 -2.6 -1.6 putative membrane protein compare
Dsui_0171 -2.5 -1.7 putative transcriptional regulator compare
Dsui_0417 -2.5 -1.7 gamma-glutamyltransferase compare
Dsui_1884 -2.5 -2.4 histidine kinase compare
Dsui_1825 -2.5 -1.7 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_1600 -2.5 -14.6 putative enzyme of heme biosynthesis compare
Dsui_1408 -2.5 -0.9 NifZ domain-containing protein compare
Dsui_2330 -2.4 -1.6 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3448 -2.4 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1445 -2.4 -2.8 succinyl-CoA synthetase, beta subunit compare
Dsui_1242 -2.4 -1.6 hypothetical protein compare
Dsui_2443 -2.3 -3.1 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_3270 -2.3 -2.6 2'-5' RNA ligase compare
Dsui_2027 -2.3 -1.5 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_1396 -2.2 -1.5 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_1620 -2.2 -1.5 PAP2 (acid phosphatase) superfamily protein compare
Dsui_3230 -2.2 -5.0 hypothetical protein compare
Dsui_3465 -2.2 -2.1 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_1619 -2.2 -2.1 putative membrane-associated, metal-dependent hydrolase compare
Dsui_3231 -2.2 -1.5 hypothetical protein compare
Dsui_0116 -2.2 -1.5 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_3298 -2.2 -12.3 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_2342 -2.2 -1.5 multidrug resistance efflux pump compare
Dsui_1857 -2.2 -1.5 putative permease, DMT superfamily compare
Dsui_3026 -2.1 -1.3 hydrogenase maturation protease compare
Dsui_2295 -2.1 -1.1 transcriptional regulator compare
Dsui_3478 -2.1 -1.1 hypothetical protein compare
Dsui_1669 -2.1 -1.4 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_3006 -2.1 -1.1 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_3114 -2.1 -1.4 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_0618 -2.1 -1.4 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_1442 -2.1 -1.4 putative efflux protein, MATE family compare
Dsui_0209 -2.1 -1.4 hypothetical protein compare
Dsui_3366 -2.1 -1.4 glycerophosphoryl diester phosphodiesterase compare
Dsui_2866 -2.1 -1.4 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_0966 -2.1 -2.7 methyl-accepting chemotaxis protein compare
Dsui_2969 -2.0 -1.4 uroporphyrin-III C-methyltransferase compare
Dsui_3117 -2.0 -1.4 hypothetical protein compare
Dsui_0253 -2.0 -1.4 HIRAN domain-containing protein compare
Dsui_3419 -2.0 -3.2 transcriptional regulator compare
Dsui_2884 -2.0 -6.9 dethiobiotin synthase compare
Dsui_0568 -2.0 -4.4 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3178 -2.0 -1.3 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_0945 -2.0 -1.1 Iron-sulfur cluster assembly accessory protein compare
Dsui_0039 -1.9 -3.7 dimethyladenosine transferase compare
Dsui_1311 -1.9 -1.3 hypothetical protein compare
Dsui_0792 -1.9 -2.2 hypothetical protein compare
Dsui_1618 -1.9 -1.3 signal transduction histidine kinase compare
Dsui_2881 -1.9 -9.5 8-amino-7-oxononanoate synthase compare
Dsui_3469 -1.9 -1.8 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_1659 -1.9 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0297 -1.9 -1.8 sugar fermentation stimulation protein compare
Dsui_2352 -1.9 -1.3 hypothetical protein compare
Dsui_2518 -1.9 -2.1 hypothetical protein compare
Dsui_0477 -1.9 -4.1 tol-pal system protein YbgF compare
Dsui_1149 -1.9 -1.3 Zn-dependent protease with chaperone function compare
Dsui_1165 -1.9 -1.2 Ni,Fe-hydrogenase I large subunit compare
Dsui_3295 -1.9 -6.3 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_0532 -1.8 -1.3 cob(I)alamin adenosyltransferase compare
Dsui_3524 -1.8 -7.1 signal transduction histidine kinase compare
Dsui_3371 -1.8 -1.2 putative oxidoreductase, aryl-alcohol dehydrogenase like protein compare
Dsui_2312 -1.8 -1.2 3-hydroxybutyrate dehydrogenase compare
Dsui_3377 -1.8 -1.2 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_0866 -1.8 -3.7 hypothetical protein compare
Dsui_2903 -1.8 -2.1 methyltransferase family protein compare
Dsui_1840 -1.8 -1.2 hypothetical protein compare
Dsui_1701 -1.8 -1.2 restriction endonuclease compare
Dsui_0558 -1.8 -1.2 tetratricopeptide repeat protein compare
Dsui_2883 -1.8 -4.6 biotin biosynthesis protein BioC compare
Dsui_1296 -1.8 -1.2 putative amidophosphoribosyltransferase compare
Dsui_0733 -1.8 -1.2 hypothetical protein compare
Dsui_2306 -1.8 -4.9 transcriptional regulator compare
Dsui_2339 -1.8 -1.2 putative domain HDIG-containing protein compare
Dsui_0431 -1.8 -2.1 putative permease, DMT superfamily compare
Dsui_0513 -1.8 -2.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2673 -1.8 -4.3 hypothetical protein compare
Dsui_0173 -1.8 -1.2 site-specific DNA methylase compare
Dsui_2822 -1.8 -1.0 hypothetical protein compare
Dsui_0691 -1.8 -1.0 hypothetical protein compare
Dsui_2762 -1.8 -0.9 Protein of unknown function (DUF3617) compare
Dsui_1605 -1.8 -1.2 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0436 -1.8 -1.2 dienelactone hydrolase-like enzyme compare
Dsui_0897 -1.8 -1.2 RND family efflux transporter, MFP subunit compare
Dsui_1855 -1.8 -1.2 hypothetical protein compare
Dsui_2228 -1.8 -1.2 Zn-dependent alcohol dehydrogenase compare
Dsui_2975 -1.7 -1.7 TonB-dependent siderophore receptor compare
Dsui_1104 -1.7 -1.2 putative thioesterase compare
Dsui_2880 -1.7 -8.7 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Dsui_3259 -1.7 -1.2 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_0765 -1.7 -1.7 conserved hypothetical protein, proteobacterial compare
Dsui_3077 -1.7 -2.0 hypothetical protein compare
Dsui_1370 -1.7 -1.2 putative permease, DMT superfamily compare
Dsui_0306 -1.7 -1.2 putative permease compare
Dsui_0176 -1.7 -1.1 ribosome modulation factor compare
Dsui_3226 -1.7 -2.0 putative SAM-dependent methyltransferase compare
Dsui_3423 -1.7 -1.1 hydroxypyruvate isomerase compare
Dsui_3125 -1.7 -2.0 cytochrome c, mono- and diheme variants family compare
Dsui_2127 -1.7 -1.0 flavodoxin reductase family protein compare
Dsui_3441 -1.7 -1.2 cation/multidrug efflux pump compare
Dsui_0992 -1.7 -2.9 putative membrane protein compare
Dsui_0871 -1.7 -0.6 hypothetical protein compare
Dsui_1660 -1.7 -1.9 outer membrane cobalamin receptor protein compare
Dsui_3396 -1.7 -1.8 transcriptional regulator compare
Dsui_3456 -1.7 -1.5 hypothetical protein compare
Dsui_1888 -1.7 -1.1 putative domain HDIG-containing protein compare
Dsui_2341 -1.7 -1.1 ABC-type multidrug transport system, ATPase component compare
Dsui_2895 -1.7 -1.1 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_2882 -1.7 -6.0 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_1817 -1.7 -1.1 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_2745 -1.7 -1.9 methyl-accepting chemotaxis protein compare
Dsui_3158 -1.7 -3.2 Na+/H+ dicarboxylate symporter compare
Dsui_3351 -1.7 -1.1 cytochrome c peroxidase compare
Dsui_1675 -1.7 -1.1 hypothetical protein compare
Dsui_0313 -1.7 -1.1 putative transcriptional regulator compare
Dsui_3393 -1.7 -8.5 Kef-type K+ transport system, membrane component compare
Dsui_1433 -1.7 -0.8 chemotaxis protein compare
Dsui_1356 -1.6 -1.1 hypothetical protein compare
Dsui_2348 -1.6 -2.8 hypothetical protein compare
Dsui_3008 -1.6 -1.1 hydrogenase expression/formation protein compare
Dsui_3392 -1.6 -11.4 carboxylate-amine ligase, YbdK family compare
Dsui_1166 -1.6 -2.2 cytochrome c peroxidase compare
Dsui_2935 -1.6 -1.1 NAD/NADP transhydrogenase alpha subunit compare
Dsui_2033 -1.6 -1.1 transcriptional regulator compare
Dsui_1931 -1.6 -1.7 transcriptional regulator compare
Dsui_2349 -1.6 -1.1 Zn-dependent hydrolase, glyoxylase compare
Dsui_3477 -1.6 -1.1 PAS domain S-box compare
Dsui_3157 -1.6 -1.1 Fatty acid cis/trans isomerase (CTI) compare
Dsui_1733 -1.6 -1.5 flagellar basal-body rod protein FlgC compare
Dsui_2877 -1.6 -2.3 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_3151 -1.6 -0.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3014 -1.6 -1.8 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_2454 -1.6 -5.0 Positive regulator of sigma E activity compare
Dsui_3120 -1.6 -1.1 cAMP-binding protein compare
Dsui_1559 -1.6 -1.1 hypothetical protein compare
Dsui_0200 -1.6 -1.1 hypothetical protein compare
Dsui_0837 -1.6 -2.5 tRNA modification GTPase TrmE compare
Dsui_1160 -1.6 -1.1 hydrogenase assembly chaperone HypC/HupF compare
Dsui_1851 -1.6 -1.1 signal transduction histidine kinase compare
Dsui_0029 -1.6 -1.1 putative pyrophosphatase compare
Dsui_2740 -1.6 -1.1 putative integral membrane protein compare
Dsui_1833 -1.6 -1.1 nitrate transport ATP-binding subunits C and D compare
Dsui_1044 -1.6 -1.1 hypothetical protein compare
Dsui_2178 -1.6 -2.1 hypothetical protein compare
Dsui_1077 -1.6 -2.9 hypothetical protein compare
Dsui_0787 -1.6 -12.5 putative membrane protein compare
Dsui_1111 -1.6 -1.1 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_2809 -1.6 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_2329 -1.6 -1.0 putative dehydrogenase compare
Dsui_2072 -1.6 -1.1 Pirin-related protein compare
Dsui_2076 -1.6 -1.5 cytochrome c, mono- and diheme variants family compare
Dsui_0954 -1.5 -1.0 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_3523 -1.5 -7.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2206 -1.5 -2.3 putative rRNA methylase SpoU family compare
Dsui_3149 -1.5 -1.0 electron transfer flavoprotein, alpha subunit compare
Dsui_3274 -1.5 -1.5 dihydrodipicolinate reductase compare
Dsui_2921 -1.5 -2.0 isochorismate synthase family protein compare
Dsui_1670 -1.5 -1.0 cytochrome c peroxidase compare
Dsui_1676 -1.5 -1.0 biopolymer transport protein compare
Dsui_2919 -1.5 -1.0 addiction module antidote protein, HigA family compare
Dsui_3443 -1.5 -1.0 RND family efflux transporter, MFP subunit compare
Dsui_3318 -1.5 -2.1 cytochrome c, mono- and diheme variants family compare
Dsui_1388 -1.5 -1.0 hypothetical protein compare
Dsui_1671 -1.5 -3.1 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_3361 -1.5 -1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium D-Lactate across organisms