Experiment set6IT036 for Dechlorosoma suillum PS

Compare to:

Sodium D-Lactate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Dsui_2095 +1.3 0.9 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_2496 +1.2 0.7 Membrane transport protein MerF compare
Dsui_0460 +1.1 4.3 ADP-heptose:LPS heptosyltransferase compare
Dsui_0068 +1.1 10.7 methyltransferase family protein compare
Dsui_2286 +1.0 0.8 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2891 +1.0 0.5 hemerythrin-like metal-binding domain-containing protein compare
Dsui_1976 +0.9 6.9 deacetylase, histone deacetylase/acetoin utilization protein compare
Dsui_2265 +0.9 2.0 DNA-directed DNA polymerase III PolC compare
Dsui_2965 +0.9 0.9 cobalamin biosynthesis protein CbiG compare
Dsui_1377 +0.9 4.6 phasin family protein compare
Dsui_3349 +0.9 1.3 hypothetical protein compare
Dsui_3028 +0.9 0.4 coenzyme F420-reducing hydrogenase, gamma subunit compare
Dsui_1291 +0.8 6.4 hypothetical protein compare
Dsui_2611 +0.8 0.4 hypothetical protein compare
Dsui_2599 +0.8 0.4 hypothetical protein compare
Dsui_1285 +0.8 6.0 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_1873 +0.8 5.3 transcriptional regulator compare
Dsui_2383 +0.8 0.6 hypothetical protein compare
Dsui_1004 +0.8 1.8 conserved protein of DIM6/NTAB family compare
Dsui_0076 +0.8 7.4 acetyltransferase, ribosomal protein N-acetylase compare
Dsui_1891 +0.8 0.5 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_1289 +0.8 6.2 hypothetical protein compare
Dsui_1283 +0.8 3.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2003 +0.7 5.3 acetate--CoA ligase compare
Dsui_1280 +0.7 5.8 type II secretory pathway, component PulF compare
Dsui_2062 +0.7 1.7 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_3436 +0.7 1.4 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase compare
Dsui_1292 +0.7 5.4 MSHA-type pilus biogenesis protein MshL compare
Dsui_2609 +0.7 0.4 hypothetical protein compare
Dsui_0075 +0.7 5.5 hypothetical protein compare
Dsui_0069 +0.7 6.1 nucleoside-diphosphate-sugar epimerase compare
Dsui_3445 +0.7 4.4 hypothetical protein compare
Dsui_1110 +0.6 0.4 branched-chain amino acid ABC-type transport system, permease component compare
Dsui_2066 +0.6 3.6 ABC-type metal ion transport system, periplasmic component/surface antigen compare
Dsui_3446 +0.6 3.3 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase compare
Dsui_0102 +0.6 2.8 transcription elongation factor compare
Dsui_1284 +0.6 4.3 hypothetical protein compare
Dsui_1956 +0.6 4.7 Rhodanese-related sulfurtransferase compare
Dsui_2069 +0.6 2.4 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0071 +0.6 5.1 dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme compare
Dsui_2853 +0.6 0.5 PPIC-type PPIASE family protein compare
Dsui_0398 +0.6 3.4 UDP-glucose-4-epimerase compare
Dsui_0066 +0.6 6.0 glycosyl transferase compare
Dsui_1112 +0.6 0.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_1279 +0.6 4.8 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2634 +0.6 0.6 cytochrome c, mono- and diheme variants family compare
Dsui_0060 +0.6 4.1 GDP-D-mannose dehydratase compare
Dsui_3495 +0.6 1.6 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_1294 +0.6 4.2 hypothetical protein compare
Dsui_3253 +0.6 4.0 Protein of unknown function (DUF3579) compare
Dsui_0074 +0.6 5.4 hypothetical protein compare
Dsui_3444 +0.6 3.5 phospho-2-dehydro-3-deoxyheptonate aldolase compare
Dsui_0067 +0.6 5.8 cephalosporin hydroxylase compare
Dsui_2812 +0.6 0.9 conserved hypothetical integral membrane protein compare
Dsui_0083 +0.6 4.8 UDP-N-acetylglucosamine 4,6-dehydratase compare
Dsui_2131 +0.6 4.7 tRNA-Arg compare
Dsui_0061 +0.6 4.8 glycosyltransferase compare
Dsui_2042 +0.6 0.4 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_1937 +0.5 4.0 outer membrane protein/peptidoglycan-associated (lipo)protein compare
Dsui_2166 +0.5 0.9 Fe2+-dicitrate sensor, membrane component compare
Dsui_2023 +0.5 3.8 transcriptional regulator compare
Dsui_1286 +0.5 3.3 hypothetical protein compare
Dsui_0084 +0.5 4.6 ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain compare
Dsui_2268 +0.5 0.8 putative lactoylglutathione lyase compare
Dsui_2752 +0.5 1.3 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_2555 +0.5 0.3 Bacteriophage coat protein B compare
Dsui_0461 +0.5 2.7 glycosyltransferase compare
Dsui_1287 +0.5 4.8 hypothetical protein compare
Dsui_2842 +0.5 0.3 radical SAM pair-associated protein compare
Dsui_2590 +0.5 0.9 Pilin accessory protein (PilO) compare
Dsui_1016 +0.5 2.0 tRNA (guanine-N(7)-)-methyltransferase compare
Dsui_2039 +0.5 3.6 OAH/OAS sulfhydrylase compare
Dsui_2188 +0.5 4.3 Protein of unknown function (DUF3460) compare
Dsui_0462 +0.5 2.5 ADP-heptose:LPS heptosyltransferase compare
Dsui_0058 +0.5 3.6 Glycosyl transferase family 11 compare
Dsui_0660 +0.5 4.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2868 +0.5 0.8 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein compare
Dsui_0070 +0.5 4.6 methyltransferase family protein compare
Dsui_1533 +0.5 1.5 disulfide bond formation protein DsbB compare
Dsui_2151 +0.5 2.5 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_1946 +0.5 3.1 putative N-acetylglucosaminyl transferase compare
Dsui_2959 +0.5 1.9 precorrin-4 C11-methyltransferase compare
Dsui_1288 +0.5 3.3 hypothetical protein compare
Dsui_1107 +0.5 1.4 cAMP-binding protein compare
Dsui_0081 +0.5 4.2 pseudaminic acid CMP-transferase compare
Dsui_0920 +0.5 0.2 fructose-2,6-bisphosphatase compare
Dsui_1495 +0.5 0.2 molecular chaperone (small heat shock protein) compare
Dsui_1281 +0.5 3.3 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_2544 +0.5 3.2 disulfide bond chaperone compare
Dsui_1869 +0.5 2.8 hypothetical protein compare
Dsui_0079 +0.5 4.3 pseudaminic acid synthase compare
Dsui_0215 +0.5 0.2 hypothetical protein compare
Dsui_0080 +0.5 3.7 pseudaminic acid biosynthesis-associated protein PseG compare
Dsui_2331 +0.5 1.7 heat shock protein compare
Dsui_0072 +0.5 4.0 CDP-glucose 4,6-dehydratase compare
Dsui_2004 +0.5 0.4 putative signal-transduction protein containing cAMP-binding and CBS domains compare
Dsui_1995 +0.5 2.8 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_0400 +0.4 2.7 putative nucleoside-diphosphate sugar epimerase compare
Dsui_1046 +0.4 1.5 hypothetical protein compare
Dsui_1042 +0.4 1.4 metal-dependent hydrolase compare
Dsui_2336 +0.4 2.9 hypothetical protein compare
Dsui_1333 +0.4 3.9 Integral membrane protein CcmA involved in cell shape determination compare
Dsui_1827 +0.4 1.5 hypothetical protein compare
Dsui_0604 +0.4 3.1 pilus retraction protein PilT compare
Dsui_2889 +0.4 3.9 parvulin-like peptidyl-prolyl isomerase compare
Dsui_0078 +0.4 3.5 putative dehydrogenase compare
Dsui_1293 +0.4 1.9 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_2159 +0.4 2.7 methyl-accepting chemotaxis protein compare
Dsui_1890 +0.4 1.0 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0228 +0.4 2.8 metalloendopeptidase-like membrane protein compare
Dsui_2103 +0.4 3.0 hypothetical protein compare
Dsui_2152 +0.4 2.1 molybdenum cofactor synthesis domain protein compare
Dsui_2068 +0.4 2.9 ABC-type metal ion transport system, ATPase component compare
Dsui_1318 +0.4 2.3 prepilin signal peptidase PulO-like peptidase compare
Dsui_1971 +0.4 2.9 RNA polymerase sigma factor RpoS compare
Dsui_2831 +0.4 4.0 hypothetical protein compare
Dsui_1582 +0.4 2.4 Fe-S oxidoreductase compare
Dsui_1690 +0.4 2.0 cAMP-binding protein compare
Dsui_2059 +0.4 2.2 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_0657 +0.4 3.2 methyl-accepting chemotaxis protein compare
Dsui_2600 +0.4 0.2 hypothetical protein compare
Dsui_2157 +0.4 0.7 PAS domain S-box compare
Dsui_1453 +0.4 1.1 metal-dependent hydrolase, beta-lactamase superfamily III compare
Dsui_0077 +0.4 3.4 putative PLP-dependent enzyme possibly involved in cell wall biogenesis compare
Dsui_0073 +0.4 3.7 glucose-1-phosphate cytidylyltransferase compare
Dsui_1902 +0.4 3.1 alkyl hydroperoxide reductase, F subunit compare
Dsui_3174 +0.4 2.7 DNA/RNA helicase, superfamily II compare
Dsui_0399 +0.4 1.2 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_2641 +0.4 0.4 putative multicopper oxidase compare
Dsui_0956 +0.4 0.3 nitrogenase molybdenum-iron protein alpha chain compare
Dsui_3090 +0.4 1.8 hypothetical protein compare
Dsui_1871 +0.4 2.2 hydrophobe/amphiphile efflux-1 (HAE1) family transporter compare
Dsui_2874 +0.4 1.4 putative periplasmic/secreted protein compare
Dsui_1540 +0.4 3.1 NAD(FAD)-dependent dehydrogenase compare
Dsui_2499 +0.4 0.2 MerE protein compare
Dsui_2606 +0.4 0.2 soluble lytic murein transglycosylase-like protein compare
Dsui_1897 +0.4 0.6 hypothetical protein compare
Dsui_1290 +0.4 1.6 hypothetical protein compare
Dsui_3091 +0.4 1.7 integral membrane protein, TerC family compare
Dsui_1436 +0.4 2.5 methyl-accepting chemotaxis protein compare
Dsui_0304 +0.4 1.0 hypothetical protein compare
Dsui_1460 +0.4 3.2 cAMP-binding protein compare
Dsui_2156 +0.4 3.1 methyl-accepting chemotaxis protein compare
Dsui_1924 +0.4 3.3 ribonucleoside-diphosphate reductase, alpha subunit compare
Dsui_1858 +0.4 3.3 transcriptional regulator compare
Dsui_1933 +0.4 2.1 2-phosphoglycolate phosphatase compare
Dsui_1393 +0.4 0.2 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0057 +0.4 2.2 glycosyltransferase compare
Dsui_1862 +0.4 1.7 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_2067 +0.4 2.2 ABC-type metal ion transport system, permease component compare
Dsui_2186 +0.4 1.5 Protein of unknown function (DUF3567) compare
Dsui_0323 +0.4 2.7 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_2183 +0.4 0.5 aldose 1-epimerase-like enzyme compare
Dsui_1332 +0.4 2.7 hypothetical protein compare
Dsui_1918 +0.4 1.8 TIGR03549 family protein compare
Dsui_3080 +0.4 1.0 molecular chaperone GrpE (heat shock protein) compare
Dsui_2057 +0.4 1.6 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_3196 +0.4 2.7 FimV N-terminal domain protein compare
Dsui_3207 +0.3 0.6 ankyrin repeat-containing protein compare
Dsui_1584 +0.3 2.3 hypothetical protein compare
Dsui_0988 +0.3 1.7 hypothetical protein compare
Dsui_0847 +0.3 2.6 16S rRNA (guanine(527)-N(7))-methyltransferase GidB compare
Dsui_2829 +0.3 3.1 hypothetical protein compare
Dsui_1109 +0.3 0.3 ABC-type branched-chain amino acid transport systems, ATPase component compare
Dsui_3154 +0.3 2.4 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_2257 +0.3 2.0 transcriptional regulator compare
Dsui_2608 +0.3 0.2 topoisomerase IA compare
Dsui_1049 +0.3 1.2 hypothetical protein compare
Dsui_1911 +0.3 2.8 ParB-like partition protein compare
Dsui_1908 +0.3 2.2 putative Fe-S-cluster redox enzyme compare
Dsui_0827 +0.3 2.8 putative acyltransferase compare
Dsui_1376 +0.3 2.6 phasin family protein compare
Dsui_1282 +0.3 0.7 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_0310 +0.3 1.9 acyl-CoA hydrolase compare
Dsui_2000 +0.3 2.3 hypothetical protein compare
Dsui_0483 +0.3 2.1 tol-pal system-associated acyl-CoA thioesterase compare
Dsui_3382 +0.3 1.5 universal stress protein UspA-like protein compare
Dsui_0128 +0.3 2.7 D-alanyl-D-alanine carboxypeptidase compare
Dsui_2180 +0.3 1.7 hypothetical protein compare
Dsui_2316 +0.3 0.7 hypothetical protein compare
Dsui_3202 +0.3 0.7 Peptidase family M48 compare
Dsui_2579 +0.3 0.6 Flp pilus assembly protein, ATPase CpaF compare
Dsui_2343 +0.3 2.9 transcriptional regulator compare
Dsui_1488 +0.3 0.2 putative metal-dependent hydrolase compare
Dsui_0192 +0.3 0.2 hypothetical protein compare
Dsui_0822 +0.3 2.7 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Dsui_1987 +0.3 2.7 putative permease compare
Dsui_2642 +0.3 0.2 outer membrane protein compare
Dsui_1967 +0.3 3.1 DNA-binding protein H-NS compare
Dsui_2273 +0.3 0.2 TonB-dependent siderophore receptor compare
Dsui_0425 +0.3 0.9 putative Fe-S oxidoreductase compare
Dsui_2222 +0.3 2.0 type II secretory pathway, component PulD compare
Dsui_3342 +0.3 2.0 ketosteroid isomerase-like enzyme compare
Dsui_2720 +0.3 1.6 tRNA pseudouridine 55 synthase compare
Dsui_2256 +0.3 2.2 flavodoxin reductase family protein compare
Dsui_2836 +0.3 0.8 hypothetical protein compare
Dsui_1011 +0.3 2.3 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2041 +0.3 1.1 enoyl-CoA hydratase/carnithine racemase compare
Dsui_1003 +0.3 2.2 phosphoribosylglycinamide formyltransferase 2 compare
Dsui_1687 +0.3 2.0 nitrogen regulatory protein PII compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in carbon source experiments

For carbon source Sodium D-Lactate across organisms