Experiment set6IT035 for Dechlorosoma suillum PS

Compare to:

a-Ketoglutaric acid disodium salt hydrate carbon source

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -7.2 -12.3 phosphotransferase system HPr (HPr) family protein compare
Dsui_1970 -5.3 -7.3 metalloendopeptidase-like membrane protein compare
Dsui_0423 -5.3 -7.3 putative permease compare
Dsui_0742 -5.0 -9.1 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_0704 -4.6 -23.3 RNA polymerase sigma-54 factor compare
Dsui_2816 -4.6 -5.5 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_1529 -3.8 -6.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3524 -3.7 -8.5 signal transduction histidine kinase compare
Dsui_0520 -3.7 -10.2 transcriptional regulator compare
Dsui_1402 -3.6 -4.0 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_2717 -3.5 -6.7 RNA polymerase-binding protein DksA compare
Dsui_3523 -3.5 -6.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2651 -3.4 -2.0 ankyrin repeat-containing protein compare
Dsui_1399 -3.3 -8.3 conserved hypothetical integral membrane protein compare
Dsui_0025 -3.3 -2.3 hypothetical protein compare
Dsui_3139 -3.3 -4.5 outer membrane assembly lipoprotein YfgL compare
Dsui_3521 -3.3 -16.4 membrane-fusion protein compare
Dsui_0968 -3.2 -2.2 deoxyinosine 3'endonuclease (endonuclease V) compare
Dsui_3520 -3.0 -18.3 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1398 -2.9 -10.4 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_1978 -2.9 -3.4 putative lipoprotein compare
Dsui_1599 -2.9 -17.7 putative enzyme of heme biosynthesis compare
Dsui_1884 -2.8 -1.9 histidine kinase compare
Dsui_1600 -2.8 -15.4 putative enzyme of heme biosynthesis compare
Dsui_0870 -2.8 -13.2 putative membrane protein compare
Dsui_1002 -2.8 -1.7 prolyl oligopeptidase family protein compare
Dsui_2443 -2.8 -2.9 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_3230 -2.7 -2.7 hypothetical protein compare
Dsui_0023 -2.7 -1.9 acetylornithine/succinylornithine aminotransferase compare
Dsui_0174 -2.7 -1.8 hypothetical protein compare
Dsui_1446 -2.7 -4.3 succinyl-CoA synthetase, alpha subunit compare
Dsui_1401 -2.5 -6.3 surface lipoprotein compare
Dsui_1400 -2.5 -11.5 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Dsui_3298 -2.5 -13.8 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_2877 -2.5 -2.4 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_3240 -2.5 -9.4 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_1969 -2.5 -14.5 protein-L-isoaspartate and D-aspartate O-methyltransferase compare
Dsui_1674 -2.5 -1.7 EAL domain-containing protein compare
Dsui_3099 -2.4 -1.6 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_1852 -2.4 -1.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1403 -2.4 -2.8 putative NTP binding protein (contains STAS domain) compare
Dsui_1580 -2.4 -8.5 PAS domain S-box compare
Dsui_1893 -2.4 -1.4 putative membrane protein compare
Dsui_1408 -2.3 -0.8 NifZ domain-containing protein compare
Dsui_3392 -2.3 -7.2 carboxylate-amine ligase, YbdK family compare
Dsui_0171 -2.3 -1.5 putative transcriptional regulator compare
Dsui_2518 -2.2 -1.5 hypothetical protein compare
Dsui_0417 -2.2 -1.5 gamma-glutamyltransferase compare
Dsui_3158 -2.2 -2.9 Na+/H+ dicarboxylate symporter compare
Dsui_2893 -2.2 -2.9 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1825 -2.2 -1.5 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_2903 -2.1 -2.0 methyltransferase family protein compare
Dsui_0297 -2.1 -1.4 sugar fermentation stimulation protein compare
Dsui_1198 -2.1 -5.2 apolipoprotein N-acyltransferase compare
Dsui_1619 -2.1 -1.4 putative membrane-associated, metal-dependent hydrolase compare
Dsui_0966 -2.1 -2.0 methyl-accepting chemotaxis protein compare
Dsui_3448 -2.1 -1.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0990 -2.0 -1.7 putative P-loop-containing kinase compare
Dsui_2330 -2.0 -1.4 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_0003 -2.0 -5.5 putative Zn-dependent protease compare
Dsui_1061 -2.0 -10.4 membrane-bound lytic murein transglycosylase compare
Dsui_1179 -2.0 -2.1 ribosome-associated heat shock protein implicated in recycling of 50S subunit compare
Dsui_3006 -2.0 -1.0 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_0487 -2.0 -1.3 hemerythrin HHE cation binding domain-containing protein compare
Dsui_0543 -2.0 -11.2 malic enzyme compare
Dsui_1947 -2.0 -1.9 nucleotide sugar dehydrogenase compare
Dsui_0568 -2.0 -4.1 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0255 -2.0 -3.4 hypothetical protein compare
Dsui_1445 -2.0 -3.4 succinyl-CoA synthetase, beta subunit compare
Dsui_2433 -2.0 -10.3 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_3531 -2.0 -3.8 Protein of unknown function (DUF3619) compare
Dsui_3105 -2.0 -11.2 CBS domain-containing protein compare
Dsui_1620 -1.9 -1.3 PAP2 (acid phosphatase) superfamily protein compare
Dsui_0650 -1.9 -5.2 hypothetical protein compare
Dsui_1857 -1.9 -1.3 putative permease, DMT superfamily compare
Dsui_3478 -1.9 -0.9 hypothetical protein compare
Dsui_1759 -1.9 -6.2 flagellar hook-basal body complex protein FliE compare
Dsui_2866 -1.9 -1.3 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_1015 -1.9 -4.4 hypothetical protein compare
Dsui_3026 -1.9 -1.1 hydrogenase maturation protease compare
Dsui_3465 -1.9 -1.8 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_3115 -1.9 -0.9 hypothetical protein compare
Dsui_3231 -1.9 -1.3 hypothetical protein compare
Dsui_1819 -1.8 -1.2 4-oxalocrotonate tautomerase family enzyme compare
Dsui_1094 -1.8 -2.9 shikimate kinase compare
Dsui_1031 -1.8 -1.3 formamidopyrimidine-DNA glycosylase Fpg compare
Dsui_2342 -1.8 -1.2 multidrug resistance efflux pump compare
Dsui_1577 -1.8 -3.0 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1442 -1.8 -1.2 putative efflux protein, MATE family compare
Dsui_3393 -1.8 -6.7 Kef-type K+ transport system, membrane component compare
Dsui_0316 -1.8 -1.2 hypothetical protein compare
Dsui_1242 -1.8 -2.1 hypothetical protein compare
Dsui_3114 -1.8 -1.2 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3456 -1.8 -1.2 hypothetical protein compare
Dsui_1396 -1.8 -1.7 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_1578 -1.8 -6.1 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1490 -1.8 -1.7 DNA-binding protein, excisionase family compare
Dsui_1669 -1.8 -1.2 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_2920 -1.8 -1.9 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0105 -1.7 -2.3 NAD-dependent aldehyde dehydrogenase compare
Dsui_0618 -1.7 -1.2 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_2027 -1.7 -1.6 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_0866 -1.7 -3.4 hypothetical protein compare
Dsui_2762 -1.7 -0.8 Protein of unknown function (DUF3617) compare
Dsui_3366 -1.7 -1.2 glycerophosphoryl diester phosphodiesterase compare
Dsui_3117 -1.7 -1.1 hypothetical protein compare
Dsui_0477 -1.7 -4.0 tol-pal system protein YbgF compare
Dsui_0945 -1.7 -0.9 Iron-sulfur cluster assembly accessory protein compare
Dsui_2242 -1.7 -2.2 hypothetical protein compare
Dsui_2991 -1.7 -2.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0683 -1.7 -12.2 soluble lytic murein transglycosylase-like protein compare
Dsui_2076 -1.7 -1.1 cytochrome c, mono- and diheme variants family compare
Dsui_1368 -1.7 -1.1 hypothetical protein compare
Dsui_1311 -1.6 -1.1 hypothetical protein compare
Dsui_2822 -1.6 -0.9 hypothetical protein compare
Dsui_3160 -1.6 -6.1 response regulator compare
Dsui_3178 -1.6 -1.1 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_3469 -1.6 -1.5 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Dsui_3257 -1.6 -1.9 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_0035 -1.6 -4.3 ankyrin repeat-containing protein compare
Dsui_3408 -1.6 -1.5 hypothetical protein compare
Dsui_2975 -1.6 -1.1 TonB-dependent siderophore receptor compare
Dsui_1925 -1.6 -2.8 acetolactate synthase, large subunit, biosynthetic type compare
Dsui_1165 -1.6 -1.1 Ni,Fe-hydrogenase I large subunit compare
Dsui_2807 -1.6 -2.5 enoyl-CoA hydratase/carnithine racemase compare
Dsui_1149 -1.6 -1.1 Zn-dependent protease with chaperone function compare
Dsui_2809 -1.6 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_1618 -1.6 -1.1 signal transduction histidine kinase compare
Dsui_3069 -1.6 -3.0 putative membrane protein compare
Dsui_3522 -1.6 -7.2 outer membrane protein compare
Dsui_0871 -1.5 -0.5 hypothetical protein compare
Dsui_1433 -1.5 -0.7 chemotaxis protein compare
Dsui_1659 -1.5 -1.0 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_1321 -1.5 -6.9 ABC-type uncharacterized transport system, permease component compare
Dsui_0033 -1.5 -1.7 Zn-dependent protease with chaperone function compare
Dsui_0778 -1.5 -2.0 small protein A (tmRNA-binding) compare
Dsui_1032 -1.5 -7.1 Flp pilus assembly protein TadD compare
Dsui_1296 -1.5 -1.0 putative amidophosphoribosyltransferase compare
Dsui_0431 -1.5 -1.8 putative permease, DMT superfamily compare
Dsui_2080 -1.5 -1.0 response regulator compare
Dsui_2127 -1.5 -0.9 flavodoxin reductase family protein compare
Dsui_2895 -1.5 -1.0 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1855 -1.5 -1.0 hypothetical protein compare
Dsui_2237 -1.5 -1.0 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_2948 -1.5 -2.0 RNA polymerase sigma factor, sigma-70 family compare
Dsui_1821 -1.5 -0.9 esterase/lipase compare
Dsui_1553 -1.5 -0.9 regulator of competence-specific genes compare
Dsui_3426 -1.5 -1.4 transcriptional regulator compare
Dsui_2312 -1.5 -1.0 3-hydroxybutyrate dehydrogenase compare
Dsui_0897 -1.5 -1.0 RND family efflux transporter, MFP subunit compare
Dsui_0173 -1.5 -1.0 site-specific DNA methylase compare
Dsui_2935 -1.5 -1.0 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1576 -1.5 -1.6 dihydrolipoamide dehydrogenase compare
Dsui_1840 -1.5 -1.0 hypothetical protein compare
Dsui_0765 -1.5 -1.0 conserved hypothetical protein, proteobacterial compare
Dsui_1992 -1.4 -3.3 ribosomal protein L9 compare
Dsui_0733 -1.4 -1.0 hypothetical protein compare
Dsui_1701 -1.4 -1.0 restriction endonuclease compare
Dsui_2228 -1.4 -1.0 Zn-dependent alcohol dehydrogenase compare
Dsui_1370 -1.4 -1.0 putative permease, DMT superfamily compare
Dsui_1605 -1.4 -1.0 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_3077 -1.4 -1.4 hypothetical protein compare
Dsui_3229 -1.4 -1.3 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_2339 -1.4 -1.0 putative domain HDIG-containing protein compare
Dsui_2294 -1.4 -1.0 phasin family protein compare
Dsui_2969 -1.4 -1.6 uroporphyrin-III C-methyltransferase compare
Dsui_0510 -1.4 -0.9 ferredoxin-type protein, NapH/MauN family compare
Dsui_0558 -1.4 -1.0 tetratricopeptide repeat protein compare
Dsui_2951 -1.4 -1.0 putative iron-regulated membrane protein compare
Dsui_0176 -1.4 -0.9 ribosome modulation factor compare
Dsui_1394 -1.4 -2.4 hypothetical protein compare
Dsui_2321 -1.4 -1.8 site-specific recombinase compare
Dsui_1931 -1.4 -1.4 transcriptional regulator compare
Dsui_1968 -1.4 -8.1 5''/3''-nucleotidase SurE compare
Dsui_2238 -1.4 -1.6 ABC-type dipeptide transport system, periplasmic component compare
Dsui_0306 -1.4 -0.9 putative permease compare
Dsui_3125 -1.4 -1.6 cytochrome c, mono- and diheme variants family compare
Dsui_1104 -1.4 -0.9 putative thioesterase compare
Dsui_2919 -1.4 -0.9 addiction module antidote protein, HigA family compare
Dsui_1867 -1.4 -1.6 signal transduction histidine kinase compare
Dsui_3008 -1.4 -0.9 hydrogenase expression/formation protein compare
Dsui_3151 -1.4 -0.6 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2476 -1.4 -0.4 hypothetical protein compare
Dsui_2072 -1.4 -0.9 Pirin-related protein compare
Dsui_3063 -1.4 -3.2 transcription elongation factor GreA compare
Dsui_2429 -1.4 -0.9 putative permease compare
Dsui_0513 -1.4 -2.2 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0553 -1.4 -0.9 putative nitrogen fixation protein compare
Dsui_1000 -1.3 -0.9 hypothetical protein compare
Dsui_3007 -1.3 -0.4 hydrogenase assembly chaperone HypC/HupF compare
Dsui_3441 -1.3 -0.9 cation/multidrug efflux pump compare
Dsui_0542 -1.3 -3.2 cobyric acid synthase CobQ compare
Dsui_2921 -1.3 -1.7 isochorismate synthase family protein compare
Dsui_0245 -1.3 -3.3 S-adenosyl-methyltransferase MraW compare
Dsui_1559 -1.3 -0.9 hypothetical protein compare
Dsui_0313 -1.3 -0.9 putative transcriptional regulator compare
Dsui_0203 -1.3 -0.6 hypothetical protein compare
Dsui_1817 -1.3 -0.9 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_2024 -1.3 -0.9 esterase/lipase compare
Dsui_2341 -1.3 -0.9 ABC-type multidrug transport system, ATPase component compare


Specific Phenotypes

For 3 genes in this experiment

For carbon source a-Ketoglutaric acid disodium salt hydrate in Dechlorosoma suillum PS

For carbon source a-Ketoglutaric acid disodium salt hydrate across organisms