Experiment set6IT035 for Caulobacter crescentus NA1000

Compare to:

PYE 0.5x 25C survival rep2 12 days

Group: survival
Media: PYE (0.5x)
Culturing: Caulo_ML2, tube, Aerobic, at 25 (C), shaken=200 rpm
By: Sneha on 8-Aug-18
Media components: 1 g/L Bacto Peptone, 0.5 g/L Yeast Extract, 0.4 mM Magnesium sulfate, 0.25 mM Calcium chloride (final concentrations)

Specific Phenotypes

For 7 genes in this experiment

SEED Subsystems

Subsystem #Specific
D-ribose utilization 1
Glycerol and Glycerol-3-phosphate Uptake and Utilization 1
Glycine and Serine Utilization 1
LOS core oligosaccharide biosynthesis 1
Potassium homeostasis 1
Pyridoxin (Vitamin B6) Biosynthesis 1
Serine Biosynthesis 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
phosphatidylcholine resynthesis via glycerophosphocholine 2 1 1
glycerophosphodiester degradation 2 1 1
L-serine biosynthesis I 3 3 1
L-cysteine biosynthesis IX (Trichomonas vaginalis) 3 2 1
superpathway of L-serine and glycine biosynthesis I 4 4 1
glycerol and glycerophosphodiester degradation 4 2 1
phospholipid remodeling (phosphatidylethanolamine, yeast) 4 2 1
superpathway of sulfate assimilation and cysteine biosynthesis 9 9 1
anandamide biosynthesis I 12 3 1