Experiment set6IT035 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

BHIS with Dimetridazole 0.025 mM

Group: stress
Media: BHIS + Dimetridazole (0.025 mM) + Dimethyl Sulfoxide (0.25 vol%)
Culturing: Btheta_ML6a, 24-well transparent microplate, Anaerobic, at 37 (C), shaken=0 rpm
By: Adam on 5/2/18
Media components: 7.7 g/L Calf brains, 9.8 g/L Beef heart, 10 g/L Proteose Peptone, 5 g/L Sodium Chloride, 2.5 g/L Disodium phosphate, 1 g/L L-Cysteine, 2 g/L Sodium bicarbonate, 0.005 g/L Hemin
Growth plate: 2026 A1

Specific Phenotypes

For 9 genes in this experiment

For stress Dimetridazole in Bacteroides thetaiotaomicron VPI-5482

For stress Dimetridazole across organisms

SEED Subsystems

Subsystem #Specific
DNA repair, bacterial 2
DNA-replication 1
Transcription factors bacterial 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
2-carboxy-1,4-naphthoquinol biosynthesis 7 5 1
superpathway of demethylmenaquinol-8 biosynthesis I 9 7 1
superpathway of demethylmenaquinol-9 biosynthesis 9 6 1
superpathway of demethylmenaquinol-6 biosynthesis I 9 6 1
superpathway of menaquinol-8 biosynthesis I 10 8 1
superpathway of menaquinol-9 biosynthesis 10 7 1
superpathway of menaquinol-12 biosynthesis 10 7 1
superpathway of menaquinol-10 biosynthesis 10 7 1
superpathway of menaquinol-11 biosynthesis 10 7 1
superpathway of menaquinol-13 biosynthesis 10 7 1
superpathway of menaquinol-6 biosynthesis 10 7 1
superpathway of menaquinol-7 biosynthesis 10 7 1
superpathway of phylloquinol biosynthesis 15 6 1
superpathway of chorismate metabolism 59 38 1