Experiment set6IT033 for Dechlorosoma suillum PS

Compare to:

ALP with Dimethyl Sulfoxide 2 vol%

200 most important genes:

  gene name fitness t score description  
Dsui_0743 -6.4 -13.9 phosphotransferase system HPr (HPr) family protein compare
Dsui_0423 -5.8 -6.9 putative permease compare
Dsui_0742 -5.2 -14.0 phosphoenolpyruvate-protein phosphotransferase compare
Dsui_2816 -4.8 -4.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_3139 -4.2 -4.1 outer membrane assembly lipoprotein YfgL compare
Dsui_2651 -3.7 -2.2 ankyrin repeat-containing protein compare
Dsui_0025 -3.5 -2.4 hypothetical protein compare
Dsui_1490 -3.2 -2.1 DNA-binding protein, excisionase family compare
Dsui_3229 -3.1 -2.1 transglutaminase-like enzyme, predicted cysteine protease compare
Dsui_0023 -2.9 -2.0 acetylornithine/succinylornithine aminotransferase compare
Dsui_1674 -2.9 -2.0 EAL domain-containing protein compare
Dsui_2893 -2.8 -2.7 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3158 -2.8 -2.7 Na+/H+ dicarboxylate symporter compare
Dsui_2772 -2.8 -1.9 uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Dsui_0003 -2.7 -5.2 putative Zn-dependent protease compare
Dsui_1852 -2.7 -1.8 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1819 -2.7 -1.3 4-oxalocrotonate tautomerase family enzyme compare
Dsui_3524 -2.7 -11.3 signal transduction histidine kinase compare
Dsui_1893 -2.6 -1.6 putative membrane protein compare
Dsui_1045 -2.6 -2.5 hypothetical protein compare
Dsui_1529 -2.6 -5.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_1408 -2.6 -0.9 NifZ domain-containing protein compare
Dsui_2330 -2.5 -1.7 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_3448 -2.5 -1.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0171 -2.5 -1.7 putative transcriptional regulator compare
Dsui_1396 -2.4 -1.7 type II secretory pathway, component ExeA (predicted ATPase) compare
Dsui_1242 -2.4 -2.3 hypothetical protein compare
Dsui_1620 -2.4 -1.6 PAP2 (acid phosphatase) superfamily protein compare
Dsui_2027 -2.4 -1.6 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_3298 -2.4 -14.2 Kef-type K+ transport system, predicted NAD-binding component compare
Dsui_0966 -2.3 -2.7 methyl-accepting chemotaxis protein compare
Dsui_3231 -2.3 -1.6 hypothetical protein compare
Dsui_2717 -2.3 -4.3 RNA polymerase-binding protein DksA compare
Dsui_2866 -2.3 -1.6 outer membrane receptor for ferrienterochelin and colicins compare
Dsui_1857 -2.3 -1.5 putative permease, DMT superfamily compare
Dsui_2921 -2.3 -2.6 isochorismate synthase family protein compare
Dsui_0520 -2.3 -11.5 transcriptional regulator compare
Dsui_1442 -2.3 -1.5 putative efflux protein, MATE family compare
Dsui_0618 -2.2 -1.5 putative lipoprotein involved in nitrous oxide reduction compare
Dsui_3114 -2.2 -1.5 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_1669 -2.2 -1.5 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0174 -2.2 -1.9 hypothetical protein compare
Dsui_1619 -2.2 -2.1 putative membrane-associated, metal-dependent hydrolase compare
Dsui_0431 -2.2 -1.5 putative permease, DMT superfamily compare
Dsui_3523 -2.2 -9.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0417 -2.2 -2.0 gamma-glutamyltransferase compare
Dsui_3478 -2.2 -1.1 hypothetical protein compare
Dsui_3117 -2.2 -1.5 hypothetical protein compare
Dsui_0945 -2.2 -1.2 Iron-sulfur cluster assembly accessory protein compare
Dsui_3077 -2.2 -1.5 hypothetical protein compare
Dsui_0116 -2.2 -1.4 alkylhydroperoxidase AhpD family core domain protein compare
Dsui_1311 -2.2 -1.4 hypothetical protein compare
Dsui_0568 -2.1 -4.6 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3465 -2.1 -2.5 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_1660 -2.1 -1.4 outer membrane cobalamin receptor protein compare
Dsui_3115 -2.1 -1.0 hypothetical protein compare
Dsui_3178 -2.1 -1.4 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_1577 -2.1 -2.5 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_0253 -2.1 -1.4 HIRAN domain-containing protein compare
Dsui_0978 -2.1 -1.3 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_1165 -2.1 -1.4 Ni,Fe-hydrogenase I large subunit compare
Dsui_1133 -2.1 -1.4 hypothetical protein compare
Dsui_2352 -2.1 -1.4 hypothetical protein compare
Dsui_2903 -2.1 -2.4 methyltransferase family protein compare
Dsui_0866 -2.0 -3.8 hypothetical protein compare
Dsui_3257 -2.0 -2.4 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_0209 -2.0 -1.4 hypothetical protein compare
Dsui_1394 -2.0 -3.0 hypothetical protein compare
Dsui_1296 -2.0 -1.4 putative amidophosphoribosyltransferase compare
Dsui_0297 -2.0 -1.9 sugar fermentation stimulation protein compare
Dsui_1607 -2.0 -1.8 putative membrane-associated protein compare
Dsui_0792 -2.0 -2.3 hypothetical protein compare
Dsui_3371 -2.0 -1.4 putative oxidoreductase, aryl-alcohol dehydrogenase like protein compare
Dsui_2991 -2.0 -2.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2312 -2.0 -1.3 3-hydroxybutyrate dehydrogenase compare
Dsui_2076 -2.0 -1.3 cytochrome c, mono- and diheme variants family compare
Dsui_2822 -2.0 -1.1 hypothetical protein compare
Dsui_3377 -2.0 -1.3 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_1553 -2.0 -1.1 regulator of competence-specific genes compare
Dsui_0870 -2.0 -13.1 putative membrane protein compare
Dsui_1402 -2.0 -4.0 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Dsui_0733 -1.9 -1.3 hypothetical protein compare
Dsui_2339 -1.9 -1.3 putative domain HDIG-containing protein compare
Dsui_1605 -1.9 -1.3 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_1701 -1.9 -1.3 restriction endonuclease compare
Dsui_0558 -1.9 -1.3 tetratricopeptide repeat protein compare
Dsui_0691 -1.9 -1.1 hypothetical protein compare
Dsui_0897 -1.9 -1.3 RND family efflux transporter, MFP subunit compare
Dsui_0765 -1.9 -1.3 conserved hypothetical protein, proteobacterial compare
Dsui_2418 -1.9 -13.4 peptide chain release factor 3 compare
Dsui_3426 -1.9 -1.8 transcriptional regulator compare
Dsui_1149 -1.9 -1.8 Zn-dependent protease with chaperone function compare
Dsui_0392 -1.9 -1.3 diacylglycerol kinase compare
Dsui_1970 -1.9 -6.3 metalloendopeptidase-like membrane protein compare
Dsui_1368 -1.9 -1.8 hypothetical protein compare
Dsui_1618 -1.9 -1.8 signal transduction histidine kinase compare
Dsui_3392 -1.9 -9.2 carboxylate-amine ligase, YbdK family compare
Dsui_2206 -1.9 -2.8 putative rRNA methylase SpoU family compare
Dsui_3441 -1.9 -1.3 cation/multidrug efflux pump compare
Dsui_1926 -1.9 -2.1 acetolactate synthase, small (regulatory) subunit compare
Dsui_0553 -1.9 -1.2 putative nitrogen fixation protein compare
Dsui_1840 -1.9 -1.3 hypothetical protein compare
Dsui_2935 -1.9 -1.2 NAD/NADP transhydrogenase alpha subunit compare
Dsui_1000 -1.9 -1.2 hypothetical protein compare
Dsui_1733 -1.8 -1.3 flagellar basal-body rod protein FlgC compare
Dsui_0306 -1.8 -1.2 putative permease compare
Dsui_2741 -1.8 -1.3 PAS domain S-box compare
Dsui_2341 -1.8 -1.2 ABC-type multidrug transport system, ATPase component compare
Dsui_1855 -1.8 -1.2 hypothetical protein compare
Dsui_2228 -1.8 -1.2 Zn-dependent alcohol dehydrogenase compare
Dsui_2127 -1.8 -1.1 flavodoxin reductase family protein compare
Dsui_1559 -1.8 -1.2 hypothetical protein compare
Dsui_1160 -1.8 -1.2 hydrogenase assembly chaperone HypC/HupF compare
Dsui_2762 -1.8 -0.9 Protein of unknown function (DUF3617) compare
Dsui_1675 -1.8 -1.2 hypothetical protein compare
Dsui_2384 -1.8 -1.2 putative esterase of the alpha-beta hydrolase superfamily compare
Dsui_1399 -1.8 -7.3 conserved hypothetical integral membrane protein compare
Dsui_3351 -1.8 -1.2 cytochrome c peroxidase compare
Dsui_2323 -1.8 -2.2 protein of unknown function (DUF1857) compare
Dsui_2443 -1.8 -2.7 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_1044 -1.8 -1.2 hypothetical protein compare
Dsui_2695 -1.8 -12.0 methionine aminopeptidase, type I compare
Dsui_3274 -1.8 -1.2 dihydrodipicolinate reductase compare
Dsui_3456 -1.8 -1.7 hypothetical protein compare
Dsui_3008 -1.8 -1.2 hydrogenase expression/formation protein compare
Dsui_2424 -1.8 -0.6 hypothetical protein compare
Dsui_1111 -1.8 -1.2 ABC-type branched-chain amino acid transport system, permease component compare
Dsui_0871 -1.8 -0.6 hypothetical protein compare
Dsui_1659 -1.8 -1.7 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_2429 -1.8 -1.2 putative permease compare
Dsui_3477 -1.8 -1.2 PAS domain S-box compare
Dsui_0313 -1.8 -1.2 putative transcriptional regulator compare
Dsui_2951 -1.8 -1.2 putative iron-regulated membrane protein compare
Dsui_1817 -1.8 -1.2 anaerobic dehydrogenase, typically selenocysteine-containing compare
Dsui_1825 -1.8 -2.1 NAD(P)H-dependent nitrite reductase, large subunit compare
Dsui_0653 -1.8 -1.2 putative SAM-dependent methyltransferase compare
Dsui_1739 -1.8 -1.2 flagellar basal-body P-ring protein compare
Dsui_2342 -1.8 -2.0 multidrug resistance efflux pump compare
Dsui_3238 -1.8 -3.1 PAS domain S-box compare
Dsui_0436 -1.8 -1.7 dienelactone hydrolase-like enzyme compare
Dsui_1433 -1.8 -0.8 chemotaxis protein compare
Dsui_1888 -1.8 -1.2 putative domain HDIG-containing protein compare
Dsui_2919 -1.8 -1.2 addiction module antidote protein, HigA family compare
Dsui_3157 -1.8 -1.2 Fatty acid cis/trans isomerase (CTI) compare
Dsui_1867 -1.8 -1.7 signal transduction histidine kinase compare
Dsui_1401 -1.8 -6.5 surface lipoprotein compare
Dsui_2518 -1.8 -2.0 hypothetical protein compare
Dsui_0620 -1.8 -1.7 Fe2+-dicitrate sensor, membrane component compare
Dsui_3521 -1.8 -12.8 membrane-fusion protein compare
Dsui_1892 -1.8 -3.0 transcriptional regulator compare
Dsui_3099 -1.8 -2.0 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_3520 -1.8 -14.0 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_0173 -1.8 -1.2 site-specific DNA methylase compare
Dsui_0954 -1.7 -1.2 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_3318 -1.7 -2.3 cytochrome c, mono- and diheme variants family compare
Dsui_0974 -1.7 -1.1 hypothetical protein compare
Dsui_1104 -1.7 -1.6 putative thioesterase compare
Dsui_3226 -1.7 -2.3 putative SAM-dependent methyltransferase compare
Dsui_2325 -1.7 -1.8 hypothetical protein compare
Dsui_3120 -1.7 -1.2 cAMP-binding protein compare
Dsui_2329 -1.7 -1.2 putative dehydrogenase compare
Dsui_2096 -1.7 -1.7 methyl-accepting chemotaxis protein compare
Dsui_1356 -1.7 -1.1 hypothetical protein compare
Dsui_1398 -1.7 -7.3 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_2740 -1.7 -1.1 putative integral membrane protein compare
Dsui_0878 -1.7 -1.2 heme/copper-type cytochrome/quinol oxidase, subunit 3 compare
Dsui_3443 -1.7 -1.1 RND family efflux transporter, MFP subunit compare
Dsui_1610 -1.7 -1.1 Protein of unknown function (DUF3079) compare
Dsui_1676 -1.7 -1.1 biopolymer transport protein compare
Dsui_1670 -1.7 -1.1 cytochrome c peroxidase compare
Dsui_1302 -1.7 -2.7 RNA polymerase sigma factor, sigma-70 family compare
Dsui_2072 -1.7 -1.1 Pirin-related protein compare
Dsui_2895 -1.7 -1.6 ABC-type uncharacterized transport system, periplasmic component compare
Dsui_1075 -1.7 -1.6 hypothetical protein compare
Dsui_3151 -1.7 -0.7 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3167 -1.7 -4.9 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_1198 -1.7 -5.5 apolipoprotein N-acyltransferase compare
Dsui_2189 -1.7 -3.5 acyl-CoA synthetase (NDP forming) compare
Dsui_3389 -1.7 -1.1 enoyl-CoA hydratase/carnithine racemase compare
Dsui_3149 -1.7 -1.1 electron transfer flavoprotein, alpha subunit compare
Dsui_2386 -1.7 -1.1 pyruvate-formate lyase-activating enzyme compare
Dsui_1523 -1.7 -1.6 drug resistance transporter, EmrB/QacA subfamily compare
Dsui_2975 -1.7 -2.2 TonB-dependent siderophore receptor compare
Dsui_0225 -1.7 -1.1 hypothetical protein compare
Dsui_2965 -1.7 -0.9 cobalamin biosynthesis protein CbiG compare
Dsui_0033 -1.6 -1.9 Zn-dependent protease with chaperone function compare
Dsui_3125 -1.6 -2.2 cytochrome c, mono- and diheme variants family compare
Dsui_1742 -1.6 -1.6 flagellar hook-associated protein 3 compare
Dsui_2809 -1.6 -0.5 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_2933 -1.6 -1.1 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_3408 -1.6 -2.1 hypothetical protein compare
Dsui_3271 -1.6 -1.1 ATP-dependent protease Clp, ATPase subunit compare
Dsui_1839 -1.6 -1.1 hypothetical protein compare
Dsui_3021 -1.6 -1.9 putative permease, DMT superfamily compare
Dsui_0487 -1.6 -1.5 hemerythrin HHE cation binding domain-containing protein compare
Dsui_2924 -1.6 -0.9 hypothetical protein compare
Dsui_1992 -1.6 -3.1 ribosomal protein L9 compare
Dsui_3179 -1.6 -1.1 signal transduction histidine kinase compare
Dsui_0200 -1.6 -1.1 hypothetical protein compare
Dsui_1400 -1.6 -7.8 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in stress experiments

For stress Dimethyl Sulfoxide across organisms