Experiment set6IT032 for Bifidobacterium breve UCC2003

Compare to:

Recovery broth at 32C

200 most important genes:

  gene name fitness t score description  
BBR_RS11210 -7.9 -9.4 phosphoenolpyruvate--protein phosphotransferase compare
BBR_RS10255 -5.7 -3.9 chromosomal replication initiator protein DnaA compare
BBR_RS18695 -5.5 -8.9 PRD domain-containing protein compare
BBR_RS18565 -4.8 -3.3 CHAP domain-containing protein compare
BBR_RS18700 -4.6 -11.2 PTS beta-glucoside transporter subunit EIIBCA compare
BBR_RS12545 -4.5 -4.4 DUF4012 domain-containing protein compare
BBR_RS11540 -4.5 -6.1 DUF1727 domain-containing protein compare
BBR_RS11205 -4.0 -3.6 HPr family phosphocarrier protein compare
BBR_RS13040 -3.5 -2.4 CHAP domain-containing protein compare
BBR_RS15070 -3.4 -5.2 endolytic transglycosylase MltG compare
BBR_RS12235 -3.3 -2.7 hypothetical protein compare
BBR_RS18955 -3.2 -17.7 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BBR_RS10620 -3.1 -7.2 phosphoprotein phosphatase compare
BBR_RS17640 -3.1 -3.6 DNA-directed RNA polymerase subunit omega compare
BBR_RS19760 -3.1 -3.6 polysaccharide ABC transporter ATPase compare
BBR_RS14210 -3.0 -2.1 hypothetical protein compare
BBR_RS19450 -3.0 -2.2 GTPase ObgE compare
BBR_RS16640 -2.7 -1.9 ABC transporter permease compare
BBR_RS16750 -2.6 -3.1 ParA family protein compare
BBR_RS19120 -2.6 -12.9 helicase compare
BBR_RS18180 -2.6 -11.4 ATP-dependent zinc metalloprotease FtsH compare
BBR_RS20465 -2.5 -9.2 chromosome partitioning protein compare
BBR_RS13805 -2.4 -2.3 hypothetical protein compare
BBR_RS12045 -2.4 -5.2 hypothetical protein compare
BBR_RS16940 -2.4 -5.6 hypothetical protein compare
BBR_RS19125 -2.4 -10.6 hypothetical protein compare
BBR_RS19640 -2.3 -1.8 phosphoesterase compare
BBR_RS20885 -2.2 -1.8 hypothetical protein compare
BBR_RS10625 -2.2 -3.8 FHA domain-containing protein compare
BBR_RS15055 -2.1 -3.5 hypothetical protein compare
BBR_RS21015 -2.0 -2.2 hypothetical protein compare
BBR_RS14265 -2.0 -5.2 Solute-binding protein of ABC transporter system for metals compare
BBR_RS18220 -2.0 -11.1 glycosyltransferase family 2 protein compare
BBR_RS14230 -2.0 -6.3 HAMP domain-containing histidine kinase compare
BBR_RS13035 -2.0 -1.3 ABC transporter permease compare
BBR_RS16425 -2.0 -2.6 DUF3071 domain-containing protein compare
BBR_RS18745 -1.9 -2.8 bifunctional riboflavin kinase/FMN adenylyltransferase compare
BBR_RS15050 -1.9 -2.3 DUF948 domain-containing protein compare
BBR_RS19815 -1.9 -15.5 ABC transporter permease compare
BBR_RS17455 -1.9 -9.3 DNA-binding response regulator compare
BBR_RS16635 -1.9 -1.8 ABC transporter ATP-binding protein compare
BBR_RS10580 -1.9 -3.4 septation inhibitor protein compare
BBR_RS13030 -1.8 -1.3 cell division ATP-binding protein FtsE compare
BBR_RS18735 -1.8 -11.5 hypothetical protein compare
BBR_RS11510 -1.8 -3.4 signal recognition particle-docking protein FtsY compare
BBR_RS17495 -1.8 -9.8 DUF58 domain-containing protein compare
BBR_RS15425 -1.7 -2.3 aspartate carbamoyltransferase compare
BBR_RS19820 -1.7 -12.8 ATP-binding protein of ABC transporter system compare
BBR_RS19375 -1.7 -1.9 acyl-CoA carboxylase subunit beta compare
BBR_RS14205 -1.7 -3.5 hypothetical protein compare
BBR_RS16605 -1.7 -9.4 hypothetical protein compare
BBR_RS14540 -1.6 -4.3 Na+/H+ antiporter NhaA compare
BBR_RS16220 -1.6 -1.6 DNA cytosine methyltransferase compare
BBR_RS17500 -1.6 -8.2 hypothetical protein compare
BBR_RS17510 -1.6 -6.2 VWA domain-containing protein compare
BBR_RS12590 -1.6 -2.0 beta-1,6-N-acetylglucosaminyltransferase compare
BBR_RS13515 -1.6 -6.5 putative sulfate exporter family transporter compare
BBR_RS16625 -1.6 -4.1 DUF3710 domain-containing protein compare
BBR_RS19435 -1.6 -2.3 pyridoxal phosphate-dependent aminotransferase compare
BBR_RS17505 -1.6 -9.5 VWA domain-containing protein compare
BBR_RS15440 -1.5 -3.8 orotidine-5'-phosphate decarboxylase compare
BBR_RS17490 -1.5 -10.4 MoxR family ATPase compare
BBR_RS16965 -1.5 -1.7 ATP-dependent DNA helicase compare
BBR_RS15665 -1.4 -2.9 preprotein translocase subunit YajC compare
BBR_RS10665 -1.4 -13.0 DUF2156 domain-containing protein compare
BBR_RS13070 -1.3 -1.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
BBR_RS15785 -1.3 -2.2 CDP-alcohol phosphatidyltransferase family protein compare
BBR_RS15130 -1.3 -3.1 metal-sulfur cluster assembly factor compare
BBR_RS21170 -1.3 -8.0 membrane protein insertion efficiency factor YidD compare
BBR_RS18175 -1.3 -1.6 GTP cyclohydrolase I FolE compare
BBR_RS14215 -1.3 -2.3 peptidase compare
BBR_RS12905 -1.3 -1.7 galactose-1-phosphate uridylyltransferase compare
BBR_RS12605 -1.3 -2.8 glycosyltransferase family 2 protein compare
BBR_RS15435 -1.3 -2.6 dihydroorotase compare
BBR_RS19540 -1.2 -2.0 homoserine dehydrogenase compare
BBR_RS20460 -1.2 -4.2 chromosome partitioning protein ParB compare
BBR_RS16650 -1.2 -7.5 ABC transporter substrate-binding protein compare
BBR_RS10940 -1.2 -8.0 DedA family protein compare
BBR_RS13630 -1.2 -3.9 carbamoyl-phosphate synthase small subunit compare
BBR_RS11590 -1.2 -1.1 30S ribosomal protein S18 compare
BBR_RS13635 -1.2 -5.5 carbamoyl-phosphate synthase large subunit compare
BBR_RS12310 -1.2 -1.8 signal recognition particle protein compare
BBR_RS13830 -1.2 -1.3 DUF4191 domain-containing protein compare
BBR_RS11970 -1.2 -2.0 Phage transcriptional regulator compare
BBR_RS17515 -1.2 -5.7 hypothetical protein compare
BBR_RS15080 -1.2 -2.4 chorismate synthase compare
BBR_RS16675 -1.2 -3.4 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
BBR_RS14370 -1.2 -3.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
BBR_RS13890 -1.1 -8.4 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
BBR_RS18215 -1.1 -5.5 AI-2E family transporter compare
BBR_RS12900 -1.1 -2.0 DeoR/GlpR transcriptional regulator compare
BBR_RS10900 -1.1 -1.3 molecular chaperone DnaK compare
BBR_RS20320 -1.1 -9.7 PTS ascorbate transporter subunit IIC compare
BBR_RS10720 -1.1 -9.0 PDZ domain-containing protein compare
BBR_RS18050 -1.1 -2.3 threonylcarbamoyl-AMP synthase compare
BBR_RS20720 -1.1 -4.2 DUF4422 domain-containing protein compare
BBR_RS20325 -1.1 -8.0 PTS lactose transporter subunit IIB compare
BBR_RS12375 -1.1 -1.2 pantetheine-phosphate adenylyltransferase compare
BBR_RS10660 -1.1 -9.4 esterase compare
BBR_RS18635 -1.0 -4.8 PspC domain-containing protein compare
BBR_RS20440 -1.0 -3.4 NUDIX hydrolase compare
BBR_RS14615 -1.0 -4.9 histidine kinase compare
BBR_RS11315 -1.0 -8.3 MFS transporter compare
BBR_RS19190 -1.0 -5.0 3-deoxy-7-phosphoheptulonate synthase compare
BBR_RS19390 -1.0 -1.5 hypothetical protein compare
BBR_RS15455 -1.0 -1.5 orotate phosphoribosyltransferase compare
BBR_RS12610 -1.0 -3.9 capsular polysaccharide biosynthesis protein compare
BBR_RS14190 -1.0 -5.9 transcriptional regulator compare
BBR_RS15650 -0.9 -1.9 Holliday junction resolvase compare
BBR_RS11135 -0.9 -8.2 dihydrodipicolinate synthase family protein compare
BBR_RS13820 -0.9 -1.9 ATP-binding protein compare
BBR_RS19160 -0.9 -1.5 phosphate ABC transporter permease subunit PstC compare
BBR_RS14260 -0.9 -1.2 ABC transporter ATP-binding protein compare
BBR_RS14625 -0.9 -4.7 pyrroline-5-carboxylate reductase compare
BBR_RS19755 -0.9 -6.5 glycosyl transferase compare
BBR_RS15090 -0.9 -1.2 type II 3-dehydroquinate dehydratase compare
BBR_RS14495 -0.9 -2.5 trigger factor compare
BBR_RS12450 -0.9 -2.0 signal peptidase I compare
BBR_RS17905 -0.9 -8.6 2-hydroxyglutaryl-CoA dehydratase activator compare
BBR_RS11720 -0.9 -3.5 DUF2469 domain-containing protein compare
BBR_RS20450 -0.8 -7.1 murein biosynthesis integral membrane protein MurJ compare
BBR_RS18325 -0.8 -1.7 DNA-binding protein compare
BBR_RS16670 -0.8 -4.3 hypothetical protein compare
BBR_RS10570 -0.8 -2.0 hypothetical protein compare
BBR_RS18575 -0.8 -2.8 hypothetical protein compare
BBR_RS19165 -0.8 -1.6 phosphate ABC transporter substrate-binding protein PstS compare
BBR_RS17155 -0.8 -1.2 cell division protein SepF compare
BBR_RS12720 -0.8 -2.2 hypothetical protein compare
BBR_RS14070 -0.8 -3.7 threonine synthase (EC 4.2.3.1) (from data) compare
BBR_RS19095 -0.8 -6.0 magnesium transporter compare
BBR_RS11770 -0.7 -3.0 chorismate mutase compare
BBR_RS20475 -0.7 -6.6 KH domain-containing protein compare
BBR_RS12985 -0.7 -4.2 MFS transporter compare
BBR_RS15695 -0.7 -4.0 membrane channel protein compare
BBR_RS20930 -0.7 -1.1 hypothetical protein compare
BBR_RS14290 -0.7 -3.3 TerC family protein compare
BBR_RS20080 -0.7 -6.1 ABC transporter substrate-binding protein compare
BBR_RS13125 -0.7 -1.3 ABC transporter permease compare
BBR_RS11515 -0.7 -5.9 ammonium transporter compare
BBR_RS13640 -0.7 -2.5 orotidine-5'-phosphate decarboxylase compare
BBR_RS20330 -0.7 -4.9 PTS sugar transporter subunit IIA compare
BBR_RS11505 -0.7 -5.7 TetR/AcrR family transcriptional regulator compare
BBR_RS10265 -0.7 -4.3 DNA replication and repair protein RecF compare
BBR_RS20415 -0.6 -5.6 G5 domain-containing protein compare
BBR_RS16685 -0.6 -1.4 alcohol dehydrogenase compare
BBR_RS13490 -0.6 -1.1 30S ribosomal protein S7 compare
BBR_RS12820 -0.6 -4.8 hypothetical protein compare
BBR_RS11805 -0.6 -3.8 hypothetical protein compare
BBR_RS13960 -0.6 -1.1 thiamine biosynthesis protein ThiS compare
BBR_RS20435 -0.6 -0.6 CCA tRNA nucleotidyltransferase compare
BBR_RS16255 -0.6 -1.4 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE compare
BBR_RS12980 -0.6 -4.7 ATP-dependent DNA helicase UvrD/REP family compare
BBR_RS15520 -0.6 -1.6 shikimate 5-dehydrogenase compare
BBR_RS12305 -0.6 -3.1 endonuclease/exonuclease/phosphatase family protein compare
BBR_RS15180 -0.6 -3.9 long-chain fatty acid--CoA ligase compare
BBR_RS19055 -0.6 -1.5 ferredoxin family protein compare
BBR_RS15805 -0.6 -2.6 prolipoprotein diacylglyceryl transferase compare
BBR_RS15670 -0.6 -1.2 adenine phosphoribosyltransferase compare
BBR_RS10615 -0.6 -3.1 FtsW/RodA/SpoVE family cell cycle protein compare
BBR_RS16960 -0.6 -1.8 transcriptional regulator MraZ compare
BBR_RS13735 -0.6 -1.1 Lon protease compare
BBR_RS13905 -0.6 -3.2 ornithine carbamoyltransferase compare
BBR_RS12500 -0.6 -0.7 sugar ABC transporter permease compare
BBR_RS19070 -0.6 -0.9 50S ribosomal protein L33 compare
BBR_RS14280 -0.6 -1.7 dephospho-CoA kinase compare
BBR_RS12325 -0.5 -3.4 type 1 glutamine amidotransferase compare
BBR_RS14610 -0.5 -1.8 DNA-binding response regulator compare
BBR_RS20430 -0.5 -0.7 hypothetical protein compare
BBR_RS16620 -0.5 -2.2 DUF3159 domain-containing protein compare
BBR_RS17290 -0.5 -3.5 Fused ATP-binding protein and permease of ABC transporter compare
BBR_RS19740 -0.5 -4.8 DUF2142 domain-containing protein compare
BBR_RS12555 -0.5 -3.5 protein-tyrosine-phosphatase compare
BBR_RS14700 -0.5 -1.4 type II toxin-antitoxin system PemK/MazF family toxin compare
BBR_RS19905 -0.5 -0.7 methionine--tRNA ligase compare
BBR_RS15760 -0.5 -2.1 MerR family transcriptional regulator compare
BBR_RS20795 -0.5 -1.2 cystathionine gamma-lyase compare
BBR_RS15330 -0.5 -1.5 hypothetical protein compare
BBR_RS19155 -0.5 -3.0 phosphate ABC transporter, permease protein PstA compare
BBR_RS10285 -0.5 -1.1 membrane protein compare
BBR_RS20400 -0.5 -4.6 serine/threonine protein kinase compare
BBR_RS18120 -0.5 -0.8 hypothetical protein compare
BBR_RS12515 -0.5 -3.9 LacI family transcriptional regulator compare
BBR_RS17415 -0.5 -1.3 hypothetical protein compare
BBR_RS14550 -0.5 -3.0 hypothetical protein compare
BBR_RS14220 -0.5 -3.0 phosphomannomutase compare
BBR_RS15085 -0.5 -0.6 3-dehydroquinate synthase compare
BBR_RS16955 -0.5 -0.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
BBR_RS16430 -0.5 -1.1 nucleotide pyrophosphatase compare
BBR_RS12975 -0.5 -3.5 ATP-dependent DNA helicase UvrD/REP family compare
BBR_RS13945 -0.4 -1.4 Txe/YoeB family addiction module toxin compare
BBR_RS16250 -0.4 -1.5 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB compare
BBR_RS10735 -0.4 -3.4 zinc metalloprotease HtpX compare
BBR_RS11175 -0.4 -3.4 penicillin-binding protein compare
BBR_RS13510 -0.4 -2.9 LysR family transcriptional regulator compare
BBR_RS17480 -0.4 -2.2 hypothetical protein compare
BBR_RS19395 -0.4 -1.1 hypothetical protein compare
BBR_RS13770 -0.4 -0.7 DNA repair protein RecO compare
BBR_RS11640 -0.4 -0.9 hypothetical protein compare
BBR_RS12830 -0.4 -2.7 G5 domain-containing protein compare
BBR_RS18170 -0.4 -0.6 dihydropteroate synthase compare


Specific Phenotypes

None in this experiment

For Bifidobacterium breve UCC2003 in temperature experiments