Experiment set6IT030 for Klebsiella michiganensis M5al

Compare to:

Thymidine nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS18950 -8.2 -4.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00855 -7.5 -5.2 argininosuccinate lyase compare
BWI76_RS23920 -7.5 -4.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00850 -7.5 -7.6 acetylglutamate kinase compare
BWI76_RS04250 -7.4 -6.6 homoserine kinase compare
BWI76_RS20895 -7.1 -4.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00990 -6.9 -7.4 ketol-acid reductoisomerase compare
BWI76_RS09755 -6.8 -6.0 phosphoserine transaminase compare
BWI76_RS18935 -6.7 -6.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS07070 -6.4 -5.4 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25320 -6.3 -7.4 glutamate synthase compare
BWI76_RS05840 -6.1 -5.5 glutamate 5-kinase compare
BWI76_RS25115 -6.0 -7.2 argininosuccinate synthase compare
BWI76_RS04510 -5.9 -2.7 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS00385 -5.9 -10.2 nitrogen assimilation regulatory protein compare
BWI76_RS23220 -5.8 -8.0 amino-acid N-acetyltransferase compare
BWI76_RS11860 -5.7 -9.0 anthranilate synthase component I compare
BWI76_RS26085 -5.7 -2.6 3-dehydroquinate synthase compare
BWI76_RS18940 -5.7 -5.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04255 -5.5 -8.2 threonine synthase compare
BWI76_RS10780 -5.4 -3.6 pyrimidine utilization protein A compare
BWI76_RS06800 -5.3 -1.4 DUF2496 domain-containing protein compare
BWI76_RS10990 -5.3 -2.2 dihydroorotase compare
BWI76_RS21465 -5.2 -4.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18925 -5.2 -6.2 histidinol dehydrogenase compare
BWI76_RS04465 -5.1 -4.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS11840 -5.0 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS11435 -5.0 -2.3 hypothetical protein compare
BWI76_RS18930 -5.0 -2.6 histidinol-phosphate transaminase compare
BWI76_RS04470 -5.0 -6.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS24285 -4.9 -6.6 cystathionine beta-lyase compare
BWI76_RS20360 -4.9 -1.3 cell division protein DedD compare
BWI76_RS25315 -4.8 -9.0 glutamate synthase large subunit compare
BWI76_RS00400 -4.8 -2.2 glutamine synthetase compare
BWI76_RS22690 -4.8 -3.9 adenylyl-sulfate kinase compare
BWI76_RS01615 -4.8 -10.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS23895 -4.7 -2.1 Xaa-Pro aminopeptidase compare
BWI76_RS00805 -4.7 -3.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS08180 -4.7 -5.8 asparagine synthase B compare
BWI76_RS04245 -4.6 -10.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS11845 -4.6 -2.1 tryptophan synthase subunit beta compare
BWI76_RS18920 -4.5 -3.2 ATP phosphoribosyltransferase compare
BWI76_RS10760 -4.4 -3.5 nitroreductase family protein compare
BWI76_RS10775 -4.4 -5.8 pyrimidine utilization protein B compare
BWI76_RS23230 -4.3 -3.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS17525 -4.3 -1.5 XshC-Cox1-family protein compare
BWI76_RS00835 -4.2 -8.3 phosphoenolpyruvate carboxylase compare
BWI76_RS00845 -4.1 -5.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS22755 -4.1 -5.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS23240 -4.1 -4.0 exonuclease V subunit gamma compare
BWI76_RS00390 -4.0 -4.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS11855 -4.0 -4.6 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS21370 -4.0 -1.3 ATP-dependent RNA helicase SrmB compare
BWI76_RS00180 -4.0 -1.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS09910 -3.9 -12.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS22765 -3.9 -6.0 sulfite reductase subunit alpha compare
BWI76_RS23365 -3.9 -6.5 LysR family transcriptional regulator compare
BWI76_RS11850 -3.8 -5.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS20355 -3.8 -2.6 colicin V production protein compare
BWI76_RS00980 -3.8 -9.0 PLP-dependent threonine dehydratase compare
BWI76_RS10770 -3.8 -1.8 pyrimidine utilization protein C compare
BWI76_RS04645 -3.8 -4.3 3-dehydroquinase compare
BWI76_RS22760 -3.7 -5.2 sulfite reductase subunit beta compare
BWI76_RS01200 -3.7 -2.1 diaminopimelate epimerase compare
BWI76_RS21265 -3.7 -7.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS03010 -3.7 -5.2 ornithine carbamoyltransferase compare
BWI76_RS22805 -3.7 -7.9 GTP diphosphokinase compare
BWI76_RS05200 -3.6 -3.2 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS18955 -3.6 -4.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS23360 -3.6 -3.6 diaminopimelate decarboxylase compare
BWI76_RS01610 -3.5 -7.4 phosphoribosylamine--glycine ligase compare
BWI76_RS01655 -3.5 -5.9 homoserine O-succinyltransferase compare
BWI76_RS02995 -3.5 -5.6 aspartate carbamoyltransferase compare
BWI76_RS11965 -3.5 -4.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS16235 -3.5 -2.2 membrane protein compare
BWI76_RS04160 -3.5 -4.2 phosphoserine phosphatase compare
BWI76_RS00785 -3.4 -4.0 cystathionine gamma-synthase compare
BWI76_RS00965 -3.4 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS08720 -3.3 -1.8 imidazolonepropionase compare
BWI76_RS27385 -3.3 -4.1 orotate phosphoribosyltransferase compare
BWI76_RS15835 -3.2 -2.1 hypothetical protein compare
BWI76_RS13245 -3.2 -2.2 DNA-damage-inducible protein I compare
BWI76_RS08385 -3.2 -3.3 citrate (Si)-synthase compare
BWI76_RS07640 -3.1 -1.8 short chain dehydrogenase compare
BWI76_RS27940 -3.1 -2.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS00345 -3.1 -4.0 protein disulfide oxidoreductase DsbA compare
BWI76_RS09760 -3.1 -3.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS02530 -3.1 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS26570 -3.1 -3.5 anion permease compare
BWI76_RS25060 -3.1 -3.8 lipoprotein NlpI compare
BWI76_RS20965 -3.0 -2.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS25070 -3.0 -1.4 hypothetical protein compare
BWI76_RS06535 -3.0 -4.2 endopeptidase La compare
BWI76_RS11105 -3.0 -2.9 aminodeoxychorismate lyase compare
BWI76_RS15975 -3.0 -1.3 hypothetical protein compare
BWI76_RS08275 -3.0 -1.5 LexA regulated protein compare
BWI76_RS00975 -3.0 -7.0 dihydroxy-acid dehydratase compare
BWI76_RS27390 -2.9 -3.0 ribonuclease PH compare
BWI76_RS26130 -2.9 -3.0 ADP compounds hydrolase NudE compare
BWI76_RS15290 -2.9 -1.3 transcriptional regulator compare
BWI76_RS20435 -2.9 -1.0 chorismate synthase compare
BWI76_RS06765 -2.8 -2.6 transcriptional regulator compare
BWI76_RS24900 -2.8 -2.2 DeoR family transcriptional regulator compare
BWI76_RS25065 -2.7 -3.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS01210 -2.6 -1.5 tyrosine recombinase XerC compare
BWI76_RS26055 -2.6 -5.6 siroheme synthase compare
BWI76_RS07065 -2.6 -4.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS22625 -2.5 -1.8 transcriptional regulator compare
BWI76_RS27820 -2.5 -1.5 ilvB operon leader peptide IvbL compare
BWI76_RS04670 -2.5 -4.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS20350 -2.5 -3.7 amidophosphoribosyltransferase compare
BWI76_RS20380 -2.4 -1.3 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS08605 -2.4 -2.2 phosphoglyceromutase compare
BWI76_RS17980 -2.4 -4.6 RNA chaperone ProQ compare
BWI76_RS24500 -2.4 -2.4 urease subunit gamma compare
BWI76_RS11250 -2.4 -1.5 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS20155 -2.3 -2.3 NADH-quinone oxidoreductase subunit I compare
BWI76_RS10755 -2.3 -1.2 pyrimidine utilization flavin reductase protein F compare
BWI76_RS13435 -2.2 -1.4 hypothetical protein compare
BWI76_RS27430 -2.2 -1.1 (p)ppGpp synthetase compare
BWI76_RS15035 -2.2 -1.3 metal ABC transporter permease compare
BWI76_RS17195 -2.2 -2.2 hypothetical protein compare
BWI76_RS10765 -2.2 -3.0 pyrimidine utilization protein D compare
BWI76_RS14915 -2.2 -2.5 hypothetical protein compare
BWI76_RS21475 -2.2 -3.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS14415 -2.2 -2.5 transcriptional regulator, TetR family protein compare
BWI76_RS04685 -2.1 -6.7 putative leucine operon leader peptide compare
BWI76_RS11260 -2.1 -1.8 hypothetical protein compare
BWI76_RS25920 -2.1 -1.6 peptidylprolyl isomerase compare
BWI76_RS14770 -2.1 -1.3 PTS IIA 2 domain protein compare
BWI76_RS04240 -2.1 -2.4 thr operon leader peptide compare
BWI76_RS05835 -2.1 -1.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS26440 -2.0 -1.4 hypothetical protein compare
BWI76_RS26410 -2.0 -1.2 membrane protein compare
BWI76_RS25645 -2.0 -4.8 shikimate dehydrogenase compare
BWI76_RS25505 -2.0 -4.7 RNase E specificity factor CsrD compare
BWI76_RS02545 -2.0 -6.3 protease modulator HflK compare
BWI76_RS20720 -2.0 -1.2 hypothetical protein compare
BWI76_RS17720 -2.0 -1.1 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19010 -1.9 -3.0 polysaccharide pyruvyl transferase yvff compare
BWI76_RS22485 -1.9 -2.9 hypothetical protein compare
BWI76_RS08040 -1.9 -2.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS04680 -1.9 -6.3 2-isopropylmalate synthase compare
BWI76_RS01800 -1.8 -1.9 glucose-6-phosphate isomerase compare
BWI76_RS04305 -1.8 -1.1 molecular chaperone DnaJ compare
BWI76_RS17975 -1.8 -2.7 tail-specific protease compare
BWI76_RS20490 -1.8 -1.8 hypothetical protein compare
BWI76_RS14325 -1.8 -2.0 maturase compare
BWI76_RS01070 -1.8 -4.2 thiol reductase thioredoxin compare
BWI76_RS09175 -1.8 -4.9 DNA-binding transcriptional regulator compare
BWI76_RS06530 -1.8 -3.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS09660 -1.8 -1.3 DNA translocase FtsK compare
BWI76_RS09240 -1.7 -1.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20695 -1.7 -3.6 sulfate/thiosulfate transporter permease subunit compare
BWI76_RS18550 -1.7 -1.3 tRNA-Asn compare
BWI76_RS21390 -1.7 -1.9 thiol disulfide reductase thioredoxin compare
BWI76_RS00140 -1.7 -0.7 phosphate transport system regulator PhoU compare
BWI76_RS08925 -1.7 -2.8 DNA-binding protein YbiB compare
BWI76_RS04665 -1.7 -8.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS09970 -1.6 -2.2 porin OmpA compare
BWI76_RS02855 -1.6 -2.2 cytochrome B562 compare
BWI76_RS13820 -1.6 -1.2 hypothetical protein compare
BWI76_RS17345 -1.6 -2.3 nitrate/nitrite two-component system sensor histidine kinase NarX compare
BWI76_RS09960 -1.6 -1.6 Lon protease compare
BWI76_RS09650 -1.6 -4.2 hypothetical protein compare
BWI76_RS20640 -1.6 -1.5 cysteine synthase A compare
BWI76_RS18885 -1.6 -2.2 nitrogen fixation regulatory protein compare
BWI76_RS09515 -1.6 -2.0 arginine ABC transporter substrate-binding protein compare
BWI76_RS20730 -1.5 -1.2 hypothetical protein compare
BWI76_RS14505 -1.5 -1.6 salicylate synthase Irp9 compare
BWI76_RS12750 -1.5 -2.7 hypothetical protein compare
BWI76_RS10745 -1.5 -0.9 hypothetical protein compare
BWI76_RS01060 -1.5 -4.1 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase conserved
BWI76_RS16190 -1.5 -1.6 universal stress protein UspE compare
BWI76_RS08535 -1.5 -1.3 translocation protein TolB compare
BWI76_RS25480 -1.4 -1.9 ribonuclease E/G compare
BWI76_RS11635 -1.4 -1.0 ABC transporter compare
BWI76_RS22685 -1.4 -2.8 hypothetical protein compare
BWI76_RS18165 -1.4 -1.1 NUDIX pyrophosphatase compare
BWI76_RS08580 -1.4 -2.5 quinolinate synthetase compare
BWI76_RS04675 -1.4 -3.1 3-isopropylmalate dehydrogenase compare
BWI76_RS25960 -1.4 -3.9 NUDIX hydrolase compare
BWI76_RS11515 -1.4 -1.0 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS10920 -1.4 -1.9 putative TetR family transcriptional regulator compare
BWI76_RS09615 -1.4 -1.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS16955 -1.4 -0.8 hypothetical protein compare
BWI76_RS11700 -1.4 -1.1 hypothetical protein compare
BWI76_RS10565 -1.4 -3.9 sugar isomerase compare
BWI76_RS02550 -1.4 -4.2 protease modulator HflC compare
BWI76_RS14460 -1.4 -1.7 MurR/RpiR family transcriptional regulator compare
BWI76_RS22085 -1.4 -1.9 L-valine transporter subunit YgaH compare
BWI76_RS23480 -1.3 -4.6 EAL domain-containing protein compare
BWI76_RS21565 -1.3 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS20560 -1.3 -2.1 hypothetical protein compare
BWI76_RS24075 -1.3 -1.4 glutathione synthase compare
BWI76_RS22475 -1.3 -1.8 heme ABC transporter ATP-binding protein compare
BWI76_RS01385 -1.3 -1.5 potassium transporter compare
BWI76_RS06485 -1.3 -2.0 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS17310 -1.3 -1.5 AsnC family transcriptional regulator compare
BWI76_RS26760 -1.3 -2.0 C4-dicarboxylate transport protein DctA (from data) compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source Thymidine in Klebsiella michiganensis M5al

For nitrogen source Thymidine across organisms