Experiment set6IT030 for Klebsiella michiganensis M5al

Compare to:

Thymidine nitrogen source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS10785 +2.3 16.6 transcriptional regulator conserved
BWI76_RS03665 +1.9 1.8 ABC transporter ATP-binding protein compare
BWI76_RS03045 +1.9 2.7 hypothetical protein compare
BWI76_RS25285 +1.7 2.3 HPr family phosphocarrier protein compare
BWI76_RS17370 +1.7 3.5 nitrate transporter NasD compare
BWI76_RS26095 +1.7 1.2 shikimate kinase compare
BWI76_RS08825 +1.7 4.5 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS26875 +1.6 2.6 dipeptide ABC transporter permease DppC compare
BWI76_RS22815 +1.5 10.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS09080 +1.5 4.5 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS21075 +1.5 2.6 membrane protein compare
BWI76_RS18335 +1.5 7.8 DNA-binding response regulator compare
BWI76_RS01325 +1.5 3.4 twin-arginine translocase subunit TatB compare
BWI76_RS24080 +1.5 2.1 DUF179 domain-containing protein compare
BWI76_RS20150 +1.5 1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08815 +1.5 7.8 cyclic pyranopterin phosphate synthase compare
BWI76_RS09085 +1.5 5.4 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS09165 +1.5 2.9 phosphatase YbjI compare
BWI76_RS08310 +1.4 2.5 potassium-transporting ATPase subunit C compare
BWI76_RS19770 +1.4 1.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS03105 +1.4 1.7 myo-inosose-2 dehydratase compare
BWI76_RS16275 +1.4 2.4 fumarate hydratase FumA compare
BWI76_RS15660 +1.4 1.3 hypothetical protein compare
BWI76_RS08110 +1.4 2.5 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS17375 +1.3 3.4 nitrate ABC transporter, permease protein compare
BWI76_RS08835 +1.3 2.7 molybdopterin guanine dinucleotide biosynthesis protein MoaE compare
BWI76_RS12585 +1.3 2.4 transcriptional regulator compare
BWI76_RS26405 +1.3 2.3 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS04975 +1.3 1.5 PTS fructose subfamily transporter subunit IIA compare
BWI76_RS07865 +1.3 1.8 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS21460 +1.2 1.7 translation inhibitor protein RaiA compare
BWI76_RS21340 +1.2 3.1 SoxR reducing system protein RseC compare
BWI76_RS27875 +1.2 1.2 membrane protein compare
BWI76_RS11440 +1.2 1.5 hypothetical protein compare
BWI76_RS10575 +1.2 2.1 polar amino acid ABC transporter permease compare
BWI76_RS04135 +1.2 6.6 thymidine phosphorylase conserved
BWI76_RS24180 +1.2 1.5 hypothetical protein compare
BWI76_RS06595 +1.2 2.6 hypothetical protein compare
BWI76_RS11010 +1.2 3.5 30S ribosomal protein S5 alanine N-acetyltransferase compare
BWI76_RS01585 +1.2 5.3 transcriptional regulator compare
BWI76_RS08780 +1.2 3.1 ABC transporter conserved
BWI76_RS15845 +1.2 1.3 hypothetical protein compare
BWI76_RS03190 +1.2 3.4 hypothetical protein compare
BWI76_RS00025 +1.1 1.1 hypothetical protein compare
BWI76_RS07785 +1.1 2.2 transcriptional regulator compare
BWI76_RS23670 +1.1 2.8 alkaline phosphatase compare
BWI76_RS07955 +1.1 4.9 nucleoside diphosphate kinase regulator compare
BWI76_RS08640 +1.1 2.1 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS17385 +1.1 7.8 nitrate regulatory protein conserved
BWI76_RS10875 +1.1 3.4 quercetin 2,3-dioxygenase compare
BWI76_RS21165 +1.1 1.9 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS07740 +1.1 1.0 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS21570 +1.1 2.2 RnfH family protein compare
BWI76_RS09450 +1.1 1.1 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS05070 +1.1 1.7 type II secretion system protein GspH compare
BWI76_RS04275 +1.0 3.7 molybdopterin adenylyltransferase compare
BWI76_RS24745 +1.0 2.3 membrane protein compare
BWI76_RS17380 +1.0 4.2 nitrate transporter component compare
BWI76_RS16315 +1.0 0.9 SirA-like protein compare
BWI76_RS24575 +1.0 1.2 hypothetical protein compare
BWI76_RS11200 +1.0 2.5 transpeptidase compare
BWI76_RS00880 +1.0 2.5 membrane protein compare
BWI76_RS13805 +1.0 2.4 inorganic diphosphatase compare
BWI76_RS08330 +1.0 1.5 hypothetical protein compare
BWI76_RS01350 +1.0 1.0 NAD(P)H-flavin reductase compare
BWI76_RS18455 +1.0 1.1 tRNA-Ser compare
BWI76_RS22620 +1.0 2.8 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS15350 +1.0 1.2 hypothetical protein compare
BWI76_RS00375 +0.9 2.1 hypothetical protein compare
BWI76_RS23270 +0.9 4.0 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS07475 +0.9 1.0 DNA-binding transcriptional regulator RamA compare
BWI76_RS05790 +0.9 1.6 phage DNA-binding protein compare
BWI76_RS14775 +0.9 0.6 creatinine amidohydrolase compare
BWI76_RS11430 +0.9 1.1 lipoprotein compare
BWI76_RS11675 +0.9 1.1 arginine N-succinyltransferase compare
BWI76_RS24585 +0.9 2.4 glycerol dehydrogenase compare
BWI76_RS24640 +0.9 2.5 aldolase compare
BWI76_RS07970 +0.9 1.4 hypothetical protein compare
BWI76_RS11990 +0.9 3.5 exoribonuclease II compare
BWI76_RS09445 +0.9 1.8 NADPH-dependent oxidoreductase compare
BWI76_RS03285 +0.9 2.6 hypothetical protein compare
BWI76_RS13320 +0.9 2.1 putative LpxA-like enzyme compare
BWI76_RS19935 +0.9 1.4 hypothetical protein compare
BWI76_RS19000 +0.9 2.3 acyltransferase compare
BWI76_RS18190 +0.9 3.1 carboxy-S-adenosyl-L-methionine synthase CmoA compare
BWI76_RS23390 +0.9 2.9 oligogalacturonide ABC transporter ATP-binding protein compare
BWI76_RS09560 +0.9 1.3 DoxX family membrane protein compare
BWI76_RS13505 +0.9 2.9 putative receptor compare
BWI76_RS27610 +0.9 2.5 hydroxyacid dehydrogenase compare
BWI76_RS10475 +0.9 3.1 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS16330 +0.9 1.6 oxidoreductase compare
BWI76_RS12235 +0.9 1.3 hypothetical protein compare
BWI76_RS08965 +0.8 2.8 glutamine ABC transporter ATP-binding protein compare
BWI76_RS27760 +0.8 2.3 lactam utilization protein LamB compare
BWI76_RS22840 +0.8 1.6 transposase compare
BWI76_RS21380 +0.8 2.7 uracil-DNA glycosylase compare
BWI76_RS19695 +0.8 1.7 membrane protein compare
BWI76_RS14375 +0.8 2.3 hypothetical protein compare
BWI76_RS18905 +0.8 1.5 putrescine/spermidine ABC transporter compare
BWI76_RS19100 +0.8 3.3 putative acid phosphatase compare
BWI76_RS15315 +0.8 2.7 DNA-binding protein compare
BWI76_RS14870 +0.8 1.1 hypothetical protein compare
BWI76_RS12465 +0.8 0.9 phage shock protein D compare
BWI76_RS06705 +0.8 3.9 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS21245 +0.8 2.5 nitrogen regulatory protein P-II compare
BWI76_RS26260 +0.8 2.3 hypothetical protein compare
BWI76_RS02575 +0.8 3.9 exoribonuclease R compare
BWI76_RS21890 +0.8 2.0 oxidoreductase compare
BWI76_RS05965 +0.8 1.8 hypothetical protein compare
BWI76_RS18060 +0.8 1.8 hypothetical protein compare
BWI76_RS09230 +0.8 1.5 hypothetical protein compare
BWI76_RS12670 +0.8 1.5 DNA polymerase V subunit UmuD compare
BWI76_RS07905 +0.8 4.9 trimethylamine-N-oxide reductase (cytochrome c) compare
BWI76_RS26890 +0.8 1.0 hypothetical protein compare
BWI76_RS00865 +0.8 1.9 DNA-binding transcriptional regulator OxyR compare
BWI76_RS20085 +0.8 2.1 GNAT family N-acetyltransferase compare
BWI76_RS15130 +0.8 2.1 hypothetical protein compare
BWI76_RS02570 +0.8 3.1 transcriptional regulator compare
BWI76_RS08545 +0.8 1.4 cell division protein CpoB compare
BWI76_RS00330 +0.8 3.3 molybdenum cofactor guanylyltransferase compare
BWI76_RS26120 +0.8 1.0 hypothetical protein compare
BWI76_RS05075 +0.8 0.9 type II secretion system protein GspG compare
BWI76_RS14170 +0.8 1.7 hypothetical protein compare
BWI76_RS17350 +0.8 2.0 DNA-binding response regulator compare
BWI76_RS27350 +0.8 2.6 hypothetical protein compare
BWI76_RS06015 +0.7 0.9 hypothetical protein compare
BWI76_RS14755 +0.7 1.5 SIS domain-containing protein compare
BWI76_RS00725 +0.7 1.1 periplasmic repressor CpxP compare
BWI76_RS26185 +0.7 1.5 thiosulfate sulfurtransferase compare
BWI76_RS13710 +0.7 1.8 benzoate 1,2-dioxygenase small subunit compare
BWI76_RS06335 +0.7 1.0 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS13350 +0.7 1.8 EamA family transporter compare
BWI76_RS13630 +0.7 1.0 ABC transporter compare
BWI76_RS25245 +0.7 1.8 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS02680 +0.7 0.9 EamA family transporter compare
BWI76_RS24295 +0.7 2.1 AraC family transcriptional regulator compare
BWI76_RS12420 +0.7 0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS26015 +0.7 1.4 DUF2559 domain-containing protein compare
BWI76_RS13470 +0.7 1.5 transporter compare
BWI76_RS12755 +0.7 1.4 hypothetical protein compare
BWI76_RS26270 +0.7 1.2 N-acetyltransferase compare
BWI76_RS00430 +0.7 1.3 GNAT family N-acetyltransferase compare
BWI76_RS15190 +0.7 2.3 GGDEF domain-containing protein compare
BWI76_RS07845 +0.7 2.0 LacI family transcriptional regulator compare
BWI76_RS15345 +0.7 1.9 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS25425 +0.7 1.3 arginine repressor compare
BWI76_RS09315 +0.7 1.3 hypothetical protein compare
BWI76_RS08820 +0.7 1.3 molybdenum cofactor biosynthesis protein compare
BWI76_RS09255 +0.7 0.7 hypothetical protein compare
BWI76_RS24260 +0.7 1.5 hypothetical protein compare
BWI76_RS16195 +0.7 1.0 hypothetical protein compare
BWI76_RS13640 +0.7 0.9 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS07590 +0.7 3.3 glutamate ABC transporter ATP-binding protein compare
BWI76_RS15435 +0.7 0.8 hypothetical protein compare
BWI76_RS18620 +0.7 2.3 L,D-transpeptidase compare
BWI76_RS23050 +0.7 1.0 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS17300 +0.7 0.9 tRNA-Tyr compare
BWI76_RS21660 +0.7 1.1 antirestriction protein compare
BWI76_RS16910 +0.7 1.0 2-keto-4-pentenoate hydratase compare
BWI76_RS18235 +0.7 2.5 trehalose-phosphatase compare
BWI76_RS25925 +0.7 2.3 hypothetical protein compare
BWI76_RS12925 +0.7 2.1 efflux transporter periplasmic adaptor subunit compare
BWI76_RS15205 +0.7 1.2 succinate-semialdehyde dehydrogenase compare
BWI76_RS21350 +0.7 1.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS19305 +0.7 2.4 ABC transporter ATP-binding protein compare
BWI76_RS25270 +0.7 0.9 ribosome hibernation promoting factor compare
BWI76_RS23320 +0.7 0.8 hypothetical protein compare
BWI76_RS05165 +0.7 1.7 cobalamin-binding protein compare
BWI76_RS05950 +0.7 1.1 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS05755 +0.7 2.2 beta-ketoacyl-[acyl-carrier-protein] synthase II compare
BWI76_RS04175 +0.7 1.3 energy-dependent translational throttle protein EttA compare
BWI76_RS19900 +0.7 1.5 FAD:protein FMN transferase compare
BWI76_RS17045 +0.7 1.0 hypothetical protein compare
BWI76_RS12180 +0.7 2.7 membrane protein compare
BWI76_RS23555 +0.7 1.6 type 1 major fimbrial subunit precursor compare
BWI76_RS11810 +0.7 0.8 outer membrane protein OmpW compare
BWI76_RS18775 +0.7 1.4 hypothetical protein compare
BWI76_RS01275 +0.7 2.1 LysR family transcriptional regulator compare
BWI76_RS14300 +0.7 0.8 hypothetical protein compare
BWI76_RS00325 +0.7 2.5 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
BWI76_RS11290 +0.7 1.4 MFS transporter compare
BWI76_RS10375 +0.7 2.3 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS00335 +0.7 1.4 hypothetical protein compare
BWI76_RS02320 +0.7 1.5 divalent ion tolerance protein CutA compare
BWI76_RS19700 +0.7 1.5 deoxyribonuclease IV compare
BWI76_RS08985 +0.7 1.7 threonine/homoserine exporter RhtA compare
BWI76_RS00795 +0.7 1.3 carboxymuconolactone decarboxylase compare
BWI76_RS07810 +0.7 1.6 sugar ABC transporter periplasmic sugar-binding protein compare
BWI76_RS20960 +0.6 2.3 ROK family protein compare
BWI76_RS09250 +0.6 1.4 hypothetical protein compare
BWI76_RS15050 +0.6 2.0 sugar transporter compare
BWI76_RS00415 +0.6 1.3 glucose-1-phosphatase compare
BWI76_RS08750 +0.6 0.7 kinase inhibitor compare
BWI76_RS16455 +0.6 1.1 superoxide dismutase compare
BWI76_RS25905 +0.6 1.4 hypothetical protein compare
BWI76_RS06540 +0.6 1.7 DNA-binding protein HU-beta compare
BWI76_RS18780 +0.6 0.9 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS24965 +0.6 0.8 SCP2 domain-containing protein compare
BWI76_RS13995 +0.6 2.6 penicillin-binding protein 2 compare
BWI76_RS26660 +0.6 1.3 transcription elongation factor GreB compare


Specific Phenotypes

For 5 genes in this experiment

For nitrogen source Thymidine in Klebsiella michiganensis M5al

For nitrogen source Thymidine across organisms