Experiment set6IT025 for Klebsiella michiganensis M5al

Compare to:

Putrescine Dihydrochloride nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS20965 -9.1 -5.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20350 -9.1 -6.3 amidophosphoribosyltransferase compare
BWI76_RS20355 -9.0 -5.5 colicin V production protein compare
BWI76_RS18950 -8.6 -5.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS23920 -7.8 -5.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18930 -7.5 -4.0 histidinol-phosphate transaminase compare
BWI76_RS18940 -7.5 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00855 -7.4 -7.3 argininosuccinate lyase compare
BWI76_RS05835 -7.4 -5.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS18925 -7.3 -7.2 histidinol dehydrogenase compare
BWI76_RS11965 -7.2 -5.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00850 -7.2 -9.6 acetylglutamate kinase compare
BWI76_RS04470 -7.1 -10.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS18935 -6.9 -7.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS22805 -6.9 -11.5 GTP diphosphokinase compare
BWI76_RS04250 -6.8 -9.3 homoserine kinase compare
BWI76_RS05840 -6.4 -6.3 glutamate 5-kinase compare
BWI76_RS23360 -6.3 -4.1 diaminopimelate decarboxylase compare
BWI76_RS07070 -6.2 -7.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04255 -6.2 -10.3 threonine synthase compare
BWI76_RS01610 -6.2 -7.2 phosphoribosylamine--glycine ligase compare
BWI76_RS00805 -6.1 -4.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS26085 -6.0 -3.6 3-dehydroquinate synthase compare
BWI76_RS04645 -5.9 -7.4 3-dehydroquinase compare
BWI76_RS18920 -5.9 -4.8 ATP phosphoribosyltransferase compare
BWI76_RS27385 -5.9 -9.0 orotate phosphoribosyltransferase compare
BWI76_RS22755 -5.8 -9.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS21475 -5.7 -5.8 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS01655 -5.6 -8.6 homoserine O-succinyltransferase compare
BWI76_RS25115 -5.4 -8.2 argininosuccinate synthase compare
BWI76_RS01615 -5.4 -9.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04665 -5.4 -22.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS24285 -5.4 -7.7 cystathionine beta-lyase compare
BWI76_RS04465 -5.4 -5.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23220 -5.4 -7.2 amino-acid N-acetyltransferase compare
BWI76_RS21265 -5.3 -12.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09910 -5.3 -15.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04160 -5.3 -6.5 phosphoserine phosphatase compare
BWI76_RS11860 -5.3 -6.6 anthranilate synthase component I compare
BWI76_RS04245 -5.3 -16.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS08385 -5.1 -5.2 citrate (Si)-synthase compare
BWI76_RS00965 -5.1 -1.8 acetolactate synthase 2 small subunit compare
BWI76_RS02995 -5.1 -6.1 aspartate carbamoyltransferase compare
BWI76_RS04670 -5.1 -7.9 3-isopropylmalate dehydratase large subunit compare
BWI76_RS23365 -5.0 -5.9 LysR family transcriptional regulator compare
BWI76_RS00785 -5.0 -8.7 cystathionine gamma-synthase compare
BWI76_RS03010 -4.8 -7.2 ornithine carbamoyltransferase compare
BWI76_RS11840 -4.8 -6.4 tryptophan synthase subunit alpha compare
BWI76_RS11845 -4.8 -2.6 tryptophan synthase subunit beta compare
BWI76_RS11850 -4.8 -8.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS09760 -4.8 -6.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00845 -4.7 -8.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS09755 -4.7 -5.7 phosphoserine transaminase compare
BWI76_RS00990 -4.7 -6.1 ketol-acid reductoisomerase compare
BWI76_RS20895 -4.7 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08180 -4.6 -6.8 asparagine synthase B compare
BWI76_RS10705 -4.5 -6.4 Gamma-glutamyl-gamma-aminobutyrate hydrolase (EC 3.5.1.94) (from data) conserved
BWI76_RS04685 -4.5 -10.3 putative leucine operon leader peptide compare
BWI76_RS07065 -4.4 -10.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS23240 -4.4 -4.2 exonuclease V subunit gamma compare
BWI76_RS04530 -4.3 -3.0 peptidylprolyl isomerase SurA compare
BWI76_RS09660 -4.3 -2.9 DNA translocase FtsK compare
BWI76_RS00980 -4.3 -11.5 PLP-dependent threonine dehydratase compare
BWI76_RS22690 -4.2 -5.0 adenylyl-sulfate kinase compare
BWI76_RS23885 -4.2 -2.1 2-octaprenylphenol hydroxylase compare
BWI76_RS22765 -4.2 -12.2 sulfite reductase subunit alpha compare
BWI76_RS04675 -4.2 -5.6 3-isopropylmalate dehydrogenase compare
BWI76_RS00975 -4.1 -7.6 dihydroxy-acid dehydratase compare
BWI76_RS11855 -3.9 -4.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04240 -3.8 -3.0 thr operon leader peptide compare
BWI76_RS04680 -3.7 -8.5 2-isopropylmalate synthase compare
BWI76_RS00400 -3.7 -3.0 glutamine synthetase compare
BWI76_RS18955 -3.7 -4.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS10990 -3.6 -2.8 dihydroorotase compare
BWI76_RS27390 -3.6 -5.0 ribonuclease PH compare
BWI76_RS09970 -3.4 -3.6 porin OmpA compare
BWI76_RS23230 -3.4 -5.2 exodeoxyribonuclease V subunit beta compare
BWI76_RS05015 -3.4 -3.1 transcriptional regulator compare
BWI76_RS27425 -3.4 -2.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS10710 -3.2 -12.6 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) conserved
BWI76_RS22760 -3.2 -6.0 sulfite reductase subunit beta compare
BWI76_RS21465 -3.2 -2.3 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS00345 -3.2 -5.7 protein disulfide oxidoreductase DsbA compare
BWI76_RS10690 -3.1 -6.2 gamma-glutamylputrescine oxidoreductase conserved
BWI76_RS02530 -3.0 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS20435 -3.0 -1.4 chorismate synthase compare
BWI76_RS06535 -3.0 -4.0 endopeptidase La compare
BWI76_RS10720 -2.9 -7.0 putrescine importer conserved
BWI76_RS20640 -2.8 -5.7 cysteine synthase A compare
BWI76_RS04510 -2.8 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS10695 -2.6 -8.7 aldehyde dehydrogenase PuuC conserved
BWI76_RS26620 -2.6 -1.6 Fe-S biogenesis protein NfuA compare
BWI76_RS01210 -2.6 -3.3 tyrosine recombinase XerC compare
BWI76_RS25645 -2.6 -6.4 shikimate dehydrogenase compare
BWI76_RS26095 -2.6 -1.6 shikimate kinase compare
BWI76_RS20090 -2.5 -7.4 ribonuclease Z compare
BWI76_RS04305 -2.5 -1.7 molecular chaperone DnaJ compare
BWI76_RS00940 -2.4 -7.1 transcriptional regulator HdfR compare
BWI76_RS06525 -2.4 -5.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS25320 -2.2 -8.1 glutamate synthase compare
BWI76_RS25070 -2.2 -1.8 hypothetical protein compare
BWI76_RS25315 -2.1 -9.5 glutamate synthase large subunit compare
BWI76_RS16235 -2.1 -3.5 membrane protein compare
BWI76_RS06495 -2.0 -7.7 cytochrome ubiquinol oxidase subunit II compare
BWI76_RS05200 -1.9 -2.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS20900 -1.9 -1.9 outer membrane protein assembly factor BamC compare
BWI76_RS27430 -1.9 -1.5 (p)ppGpp synthetase compare
BWI76_RS06765 -1.9 -3.3 transcriptional regulator compare
BWI76_RS10700 -1.8 -5.3 XRE family transcriptional regulator compare
BWI76_RS00390 -1.8 -4.8 two-component system sensor histidine kinase NtrB compare
BWI76_RS25065 -1.8 -3.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS09465 -1.8 -6.8 polyamine ABC transporter ATP-binding protein conserved
BWI76_RS06490 -1.8 -5.2 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS00985 -1.8 -4.6 transcriptional regulator IlvY compare
BWI76_RS26055 -1.8 -7.4 siroheme synthase compare
BWI76_RS16965 -1.8 -2.4 murein lipoprotein compare
BWI76_RS15835 -1.7 -1.3 hypothetical protein compare
BWI76_RS00385 -1.7 -7.0 nitrogen assimilation regulatory protein compare
BWI76_RS00180 -1.7 -1.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS09470 -1.7 -2.0 putrescine ABC transporter permease compare
BWI76_RS18755 -1.7 -1.6 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS02410 -1.7 -2.1 EF-P beta-lysylation protein EpmB compare
BWI76_RS23480 -1.7 -9.2 EAL domain-containing protein compare
BWI76_RS01200 -1.6 -1.9 diaminopimelate epimerase compare
BWI76_RS09475 -1.6 -3.1 putrescine ABC transporter permease PotI compare
BWI76_RS21565 -1.5 -1.4 outer membrane protein assembly factor BamE compare
BWI76_RS12090 -1.4 -1.0 HNH endonuclease compare
BWI76_RS08525 -1.4 -2.1 colicin transporter compare
BWI76_RS02735 -1.4 -3.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS06485 -1.4 -2.9 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS15825 -1.4 -2.3 hypothetical protein compare
BWI76_RS26405 -1.4 -1.5 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS15830 -1.4 -2.5 hypothetical protein compare
BWI76_RS08535 -1.4 -2.6 translocation protein TolB compare
BWI76_RS08500 -1.4 -2.1 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS16935 -1.4 -1.7 shikimate dehydrogenase compare
BWI76_RS13595 -1.3 -4.1 transcriptional regulator compare
BWI76_RS25505 -1.3 -6.2 RNase E specificity factor CsrD compare
BWI76_RS05005 -1.3 -2.5 polynucleotide adenylyltransferase compare
BWI76_RS16805 -1.3 -1.8 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS22485 -1.3 -3.1 hypothetical protein compare
BWI76_RS25280 -1.3 -1.8 RNase adaptor protein RapZ compare
BWI76_RS11770 -1.3 -2.7 hypothetical protein compare
BWI76_RS23270 -1.3 -6.6 phosphoenolpyruvate--protein phosphotransferase PtsP compare
BWI76_RS20995 -1.3 -3.9 RNA degradosome polyphosphate kinase compare
BWI76_RS25960 -1.2 -3.5 NUDIX hydrolase compare
BWI76_RS21235 -1.2 -1.2 hypothetical protein compare
BWI76_RS15810 -1.2 -4.1 hypothetical protein compare
BWI76_RS17980 -1.2 -3.3 RNA chaperone ProQ compare
BWI76_RS04715 -1.2 -1.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS15990 -1.2 -4.3 serine protease compare
BWI76_RS08520 -1.2 -2.2 colicin transporter TolQ compare
BWI76_RS15840 -1.2 -2.4 prophage protein compare
BWI76_RS12205 -1.2 -3.3 hypothetical protein compare
BWI76_RS24290 -1.2 -3.8 membrane protein compare
BWI76_RS13245 -1.2 -2.5 DNA-damage-inducible protein I compare
BWI76_RS07185 -1.2 -1.3 hypothetical protein compare
BWI76_RS04705 -1.1 -4.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS01220 -1.1 -5.2 DNA-dependent helicase II compare
BWI76_RS09460 -1.1 -2.3 spermidine/putrescine ABC transporter substrate-binding protein PotF compare
BWI76_RS25285 -1.1 -1.1 HPr family phosphocarrier protein compare
BWI76_RS09610 -1.1 -1.8 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS16485 -1.1 -1.9 ribonuclease T compare
BWI76_RS22695 -1.1 -5.3 sulfate adenylyltransferase compare
BWI76_RS25480 -1.1 -2.5 ribonuclease E/G compare
BWI76_RS13755 -1.1 -1.6 hypothetical protein compare
BWI76_RS10785 -1.0 -5.3 transcriptional regulator compare
BWI76_RS03500 -1.0 -6.7 hypothetical protein compare
BWI76_RS22645 -1.0 -2.3 RNA polymerase sigma factor RpoS compare
BWI76_RS20380 -1.0 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS11430 -1.0 -1.1 lipoprotein compare
BWI76_RS19750 -1.0 -2.8 elongation factor P-like protein YeiP compare
BWI76_RS22700 -1.0 -4.3 sulfate adenylyltransferase subunit 2 compare
BWI76_RS18240 -1.0 -1.7 L-arabinose ABC transporter permease AraH compare
BWI76_RS21580 -1.0 -1.5 SsrA-binding protein compare
BWI76_RS06475 -1.0 -1.1 protoheme IX farnesyltransferase compare
BWI76_RS16605 -1.0 -3.9 hypothetical protein compare
BWI76_RS10345 -1.0 -6.9 MFS transporter compare
BWI76_RS17975 -1.0 -4.1 tail-specific protease compare
BWI76_RS21130 -1.0 -1.6 Fe-S assembly protein IscX compare
BWI76_RS00240 -1.0 -1.9 FMN-binding protein MioC compare
BWI76_RS06530 -0.9 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS08530 -0.9 -1.9 protein TolA compare
BWI76_RS18695 -0.9 -2.6 GntR family transcriptional regulator compare
BWI76_RS11040 -0.9 -1.6 ribonuclease E compare
BWI76_RS25300 -0.9 -2.4 hybrid sensor histidine kinase/response regulator compare
BWI76_RS00225 -0.9 -4.6 16S rRNA methyltransferase G compare
BWI76_RS20710 -0.9 -2.9 dyp-type peroxidase family protein compare
BWI76_RS04570 -0.9 -4.7 RNA polymerase-associated protein RapA compare
BWI76_RS01800 -0.9 -3.4 glucose-6-phosphate isomerase compare
BWI76_RS15860 -0.9 -3.5 adenine-specific DNA methyltransferase compare
BWI76_RS19685 -0.9 -4.0 lysine transporter compare
BWI76_RS01580 -0.9 -1.9 hypothetical protein compare
BWI76_RS02990 -0.9 -3.0 aspartate carbamoyltransferase regulatory subunit compare
BWI76_RS20360 -0.9 -0.9 cell division protein DedD compare
BWI76_RS01330 -0.9 -1.6 twin-arginine translocase subunit TatC compare
BWI76_RS09650 -0.9 -3.7 hypothetical protein compare
BWI76_RS12790 -0.9 -0.9 lactate dehydrogenase compare
BWI76_RS21395 -0.9 -1.3 DTW domain-containing protein compare
BWI76_RS11155 -0.9 -2.1 penicillin-binding protein activator LpoB compare


Specific Phenotypes

For 8 genes in this experiment

For nitrogen source Putrescine Dihydrochloride in Klebsiella michiganensis M5al

For nitrogen source Putrescine Dihydrochloride across organisms