Experiment set6IT023 for Methanococcus maripaludis S2

Compare to:

formate McAA B12 dropout

200 most important genes:

  gene name fitness t score description  
MMP_RS01175 -4.9 -8.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08720 -4.9 -3.7 4Fe-4S binding protein compare
MMP_RS06700 -4.9 -19.8 hypothetical protein compare
MMP_RS01500 -4.8 -4.9 CBS domain-containing protein compare
MMP_RS01020 -4.7 -1.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06355 -4.4 -6.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07635 -4.4 -12.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS05515 -4.3 -12.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06350 -4.3 -12.7 HesA/MoeB/ThiF family protein compare
MMP_RS06685 -4.0 -21.9 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS03015 -3.9 -14.6 GTP 3' 8-cyclase MoaA compare
MMP_RS06345 -3.9 -15.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS06680 -3.9 -20.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS04710 -3.9 -3.4 hypothetical protein compare
MMP_RS07525 -3.6 -9.5 4Fe-4S binding protein compare
MMP_RS03315 -3.4 -1.9 ferrous iron transport protein A compare
MMP_RS01985 -3.3 -11.7 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06715 -3.2 -18.8 cache domain-containing protein compare
MMP_RS06720 -3.2 -14.2 response regulator transcription factor compare
MMP_RS04900 -3.1 -22.3 hypothetical protein compare
MMP_RS08300 -3.0 -2.6 metal-sulfur cluster assembly factor compare
MMP_RS02010 -3.0 -13.6 PHP domain-containing protein compare
MMP_RS08820 -3.0 -8.1 hypothetical protein compare
MMP_RS07445 -2.9 -8.9 helix-turn-helix domain-containing protein compare
MMP_RS03445 -2.9 -1.9 methanogenesis marker 17 protein compare
MMP_RS06285 -2.9 -5.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07630 -2.9 -3.6 ATP-binding cassette domain-containing protein compare
MMP_RS06705 -2.8 -8.3 formate/nitrite transporter family protein compare
MMP_RS01545 -2.8 -2.1 CBS domain-containing protein compare
MMP_RS01005 -2.7 -2.5 riboflavin synthase compare
MMP_RS00040 -2.7 -5.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS04615 -2.6 -8.5 PDGLE domain-containing protein compare
MMP_RS06105 -2.6 -9.1 hydrogenase maturation peptidase HycI compare
MMP_RS08745 -2.6 -10.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04775 -2.6 -5.8 adenosylhomocysteinase compare
MMP_RS06400 -2.6 -2.8 4Fe-4S binding protein compare
MMP_RS04605 -2.6 -7.8 cobalt ECF transporter T component CbiQ compare
MMP_RS04585 -2.5 -11.6 AIR synthase related protein compare
MMP_RS06175 -2.5 -8.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS00620 -2.5 -9.9 4Fe-4S binding protein compare
MMP_RS03600 -2.5 -4.1 triose-phosphate isomerase compare
MMP_RS06975 -2.5 -2.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS08635 -2.4 -3.0 UbiA family prenyltransferase compare
MMP_RS08460 -2.4 -4.0 proteasome-activating nucleotidase compare
MMP_RS01610 -2.4 -5.6 hypothetical protein compare
MMP_RS04620 -2.4 -12.7 cobalt transporter CbiM compare
MMP_RS07365 -2.4 -13.1 2-phosphoglycerate kinase compare
MMP_RS01980 -2.4 -18.1 trimeric intracellular cation channel family protein compare
MMP_RS00895 -2.4 -5.5 hypothetical protein compare
MMP_RS06295 -2.4 -9.3 methanogenesis marker 14 protein compare
MMP_RS00115 -2.4 -14.8 radical SAM protein compare
MMP_RS02800 -2.3 -8.0 nucleotidyltransferase domain-containing protein compare
MMP_RS00300 -2.3 -1.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05875 -2.3 -6.5 hydroxyethylthiazole kinase compare
MMP_RS07845 -2.3 -4.3 LL-diaminopimelate aminotransferase compare
MMP_RS02355 -2.3 -4.4 30S ribosomal protein S27ae compare
MMP_RS01265 -2.3 -3.6 hypothetical protein compare
MMP_RS03025 -2.3 -9.5 molybdenum cofactor guanylyltransferase compare
MMP_RS04890 -2.3 -1.7 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS05765 -2.3 -8.9 M42 family metallopeptidase compare
MMP_RS02165 -2.3 -11.1 tRNA-dihydrouridine synthase compare
MMP_RS03250 -2.2 -4.1 MJ1244 family protein compare
MMP_RS02340 -2.2 -3.1 DNA-directed RNA polymerase subunit E'' compare
MMP_RS06315 -2.2 -1.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08715 -2.2 -3.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01665 -2.2 -4.7 DUF2111 domain-containing protein compare
MMP_RS02195 -2.1 -6.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02240 -2.1 -4.3 methanogenesis marker 7 protein compare
MMP_RS08165 -2.1 -5.4 phosphoglycerate dehydrogenase compare
MMP_RS06625 -2.1 -3.2 DNA primase compare
MMP_RS08210 -2.1 -3.9 phosphatidylglycerophosphatase A compare
MMP_RS06270 -2.0 -6.5 TIGR00300 family protein compare
MMP_RS08645 -2.0 -9.4 UPF0179 family protein compare
MMP_RS08790 -2.0 -3.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS01220 -2.0 -12.0 hypothetical protein compare
MMP_RS07605 -2.0 -5.2 diadenylate cyclase compare
MMP_RS00685 -2.0 -5.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS09020 -1.9 -3.0 hypothetical protein compare
MMP_RS05250 -1.9 -2.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00695 -1.9 -1.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS03475 -1.9 -1.1 hypothetical protein compare
MMP_RS02235 -1.9 -7.0 CBS domain-containing protein compare
MMP_RS01365 -1.9 -4.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS03035 -1.9 -5.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07005 -1.9 -1.1 4Fe-4S binding protein compare
MMP_RS05430 -1.9 -4.6 TIGR00288 family NYN domain-containing protein compare
MMP_RS02345 -1.8 -4.5 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00110 -1.8 -3.9 hypothetical protein compare
MMP_RS03435 -1.8 -3.1 ketol-acid reductoisomerase compare
MMP_RS05925 -1.8 -4.6 small nuclear ribonucleoprotein compare
MMP_RS06020 -1.8 -5.0 archaeoflavoprotein AfpA compare
MMP_RS00320 -1.8 -2.3 class I SAM-dependent methyltransferase compare
MMP_RS01700 -1.8 -1.5 dihydroxy-acid dehydratase compare
MMP_RS04870 -1.8 -5.9 TIGR02253 family HAD-type hydrolase compare
MMP_RS03580 -1.8 -6.4 signal recognition particle-docking protein FtsY compare
MMP_RS05540 -1.8 -2.1 hypothetical protein compare
MMP_RS00295 -1.7 -3.9 gamma carbonic anhydrase family protein compare
MMP_RS07420 -1.7 -4.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08320 -1.7 -8.0 molybdopterin molybdotransferase MoeA compare
MMP_RS01225 -1.7 -7.5 DUF5379 domain-containing protein compare
MMP_RS06925 -1.7 -4.0 ribonuclease VapC4 compare
MMP_RS06895 -1.7 -2.2 selenocysteine-specific translation elongation factor compare
MMP_RS08195 -1.7 -8.8 hypothetical protein compare
MMP_RS07575 -1.6 -5.6 RNA ligase partner protein compare
MMP_RS08435 -1.6 -3.3 Era-like GTP-binding protein compare
MMP_RS06885 -1.6 -3.1 50S ribosome-binding GTPase compare
MMP_RS00305 -1.6 -2.9 phosphoribosyl-ATP diphosphatase compare
MMP_RS07600 -1.6 -4.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07355 -1.6 -1.7 transcription factor S compare
MMP_RS02900 -1.6 -0.9 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS03485 -1.6 -5.8 TIGR00267 family protein compare
MMP_RS07755 -1.6 -2.0 DUF555 domain-containing protein compare
MMP_RS04780 -1.5 -2.8 ribonuclease P compare
MMP_RS03770 -1.5 -6.6 hydroxylamine reductase compare
MMP_RS03640 -1.5 -4.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07735 -1.5 -1.4 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06475 -1.4 -5.0 FAD-dependent oxidoreductase compare
MMP_RS07710 -1.4 -6.3 cell division protein FtsZ compare
MMP_RS06630 -1.4 -1.5 UPF0058 family protein compare
MMP_RS05245 -1.4 -7.4 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01755 -1.4 -1.6 DUF2097 domain-containing protein compare
MMP_RS01440 -1.4 -6.1 NAAT family transporter compare
MMP_RS01325 -1.4 -2.8 dihydroneopterin aldolase family protein compare
MMP_RS01795 -1.4 -1.5 methanogenesis marker 6 protein compare
MMP_RS02175 -1.4 -1.2 DUF1611 domain-containing protein compare
MMP_RS06215 -1.3 -2.8 30S ribosomal protein S6e compare
MMP_RS03080 -1.3 -2.9 universal stress protein compare
MMP_RS07765 -1.3 -7.5 sodium:alanine symporter family protein compare
MMP_RS00555 -1.3 -4.9 MFS transporter compare
MMP_RS04685 -1.3 -2.1 DUF126 domain-containing protein compare
MMP_RS02280 -1.3 -1.3 DUF211 domain-containing protein compare
MMP_RS07545 -1.3 -1.4 HTH domain-containing protein compare
MMP_RS05815 -1.3 -2.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS03400 -1.3 -3.2 archease compare
MMP_RS00050 -1.3 -5.9 AarF/UbiB family protein compare
MMP_RS06120 -1.3 -2.3 UPF0147 family protein compare
MMP_RS06170 -1.2 -7.7 ABC transporter ATP-binding protein compare
MMP_RS01575 -1.2 -5.2 aldolase compare
MMP_RS05920 -1.2 -0.8 50S ribosomal protein L37e compare
MMP_RS00915 -1.2 -5.0 DUF116 domain-containing protein compare
MMP_RS01250 -1.2 -6.0 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS08785 -1.2 -1.4 RNA-protein complex protein Nop10 compare
MMP_RS05550 -1.2 -0.9 cation:proton antiporter compare
MMP_RS06200 -1.2 -7.4 M24 family metallopeptidase compare
MMP_RS02145 -1.2 -5.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS01375 -1.2 -9.0 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
MMP_RS05345 -1.2 -5.7 hypothetical protein compare
MMP_RS01745 -1.1 -4.9 AMP phosphorylase compare
MMP_RS04875 -1.1 -4.0 energy-converting hydrogenase B subunit P compare
MMP_RS07730 -1.1 -1.8 pyruvate synthase subunit beta compare
MMP_RS03520 -1.1 -2.0 YwbE family protein compare
MMP_RS05425 -1.1 -3.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01380 -1.1 -3.8 PHP domain-containing protein compare
MMP_RS06930 -1.1 -7.6 MBL fold metallo-hydrolase compare
MMP_RS07380 -1.1 -1.9 transcription elongation factor Spt5 compare
MMP_RS08070 -1.1 -4.6 DUF2096 domain-containing protein compare
MMP_RS00515 -1.1 -1.2 DUF655 domain-containing protein compare
MMP_RS03155 -1.1 -5.3 precorrin-6A reductase compare
MMP_RS06230 -1.1 -2.7 helix-turn-helix domain-containing protein compare
MMP_RS00060 -1.1 -1.9 3-dehydroquinate synthase II compare
MMP_RS06675 -1.1 -5.3 ADP-specific phosphofructokinase compare
MMP_RS05510 -1.1 -3.3 Rrf2 family transcriptional regulator compare
MMP_RS01800 -1.1 -3.5 TIGR00303 family protein compare
MMP_RS08000 -1.1 -7.6 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMP_RS02245 -1.1 -3.0 hypothetical protein compare
MMP_RS06165 -1.1 -7.0 ABC transporter permease compare
MMP_RS06865 -1.0 -1.3 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS08200 -1.0 -8.2 archaeosine synthase subunit alpha compare
MMP_RS07200 -1.0 -4.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04695 -1.0 -3.7 selenide water dikinase SelD compare
MMP_RS01725 -1.0 -3.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS05445 -1.0 -5.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS00810 -1.0 -5.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01750 -1.0 -5.8 DUF63 family protein compare
MMP_RS07705 -1.0 -4.7 transcriptional regulator compare
MMP_RS03555 -1.0 -5.2 transcriptional regulator compare
MMP_RS05450 -1.0 -2.7 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS05555 -0.9 -1.4 DUF4040 domain-containing protein compare
MMP_RS06340 -0.9 -4.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00290 -0.9 -3.2 hypothetical protein compare
MMP_RS03095 -0.9 -5.3 diphthine synthase compare
MMP_RS05800 -0.9 -5.7 B12-binding domain-containing radical SAM protein compare
MMP_RS07385 -0.9 -1.9 protein translocase SEC61 complex subunit gamma compare
MMP_RS07685 -0.9 -3.9 TIGR01212 family radical SAM protein compare
MMP_RS07535 -0.9 -4.6 4Fe-4S binding protein compare
MMP_RS07625 -0.8 -2.7 cobalt ECF transporter T component CbiQ compare
MMP_RS03590 -0.8 -3.8 METTL5 family protein compare
MMP_RS03775 -0.8 -2.1 4Fe-4S dicluster domain-containing protein compare
MMP_RS06855 -0.8 -5.9 hypothetical protein compare
MMP_RS05845 -0.8 -2.0 tRNA-intron lyase compare
MMP_RS01465 -0.8 -1.8 hypothetical protein compare
MMP_RS06730 -0.8 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS07580 -0.8 -1.8 DUF356 domain-containing protein compare
MMP_RS07750 -0.8 -3.1 DUF357 domain-containing protein compare
MMP_RS02135 -0.8 -2.0 DUF5612 domain-containing protein compare
MMP_RS08940 -0.8 -1.3 MetS family NSS transporter small subunit compare
MMP_RS07350 -0.8 -1.1 preprotein translocase subunit Sec61beta compare
MMP_RS08690 -0.8 -4.4 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare
MMP_RS03305 -0.8 -4.3 winged helix-turn-helix domain-containing protein compare
MMP_RS02190 -0.8 -2.5 sulfopyruvate decarboxylase subunit alpha compare


Specific Phenotypes

For 1 genes in this experiment