Experiment set6IT008 for Sinorhizobium meliloti 1021

Compare to:

Day4 TSB

200 most important genes:

  gene name fitness t score description  
SMc02245 -5.0 -3.2 dihydroorotate dehydrogenase 2 compare
SMc00963 -4.5 -2.6 hypothetical protein compare
SMc01183 -3.8 -1.8 LexA repressor compare
SMc00412 -3.1 -2.1 orotidine 5'-phosphate decarboxylase compare
SMc04001 -2.7 -1.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02755 -2.6 -8.7 S-adenosyl-L-homocysteine hydrolase compare
SMc00073 -2.5 -4.1 hypothetical protein compare
SMc00495 -2.5 -8.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc04088 -2.5 -14.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02246 -2.4 -0.6 hypothetical protein compare
SMc03069 -2.4 -1.5 6-phosphogluconolactonase compare
SMc00993 -2.3 -14.1 phosphoribosylamine--glycine ligase compare
SMc01220 -2.3 -9.8 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00614 -2.3 -10.6 phosphoribosylglycinamide formyltransferase compare
SMc00815 -2.3 -1.3 inosine 5'-monophosphate dehydrogenase compare
SMc02166 -2.3 -5.3 dihydroorotase compare
SMc00689 -2.1 -10.9 lipoprotein compare
SMc01850 -2.1 -7.1 hypothetical protein compare
SMc00488 -2.0 -14.8 phosphoribosylformylglycinamidine synthase II compare
SM_b21174 -1.9 -3.2 phosphate uptake ABC transporter permease compare
SMc00494 -1.9 -3.0 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc02640 -1.9 -6.0 UDP-glucuronic acid epimerase compare
SMc01147 -1.9 -4.6 coproporphyrinogen III oxidase compare
SMc00615 -1.8 -8.7 phosphoribosylaminoimidazole synthetase compare
SMc02165 -1.8 -4.6 orotate phosphoribosyltransferase compare
SMc00493 -1.8 -7.7 phosphoribosylformylglycinamidine synthase I compare
SMc02641 -1.7 -4.7 UDP-glucose 6-dehydrogenase compare
SMc00554 -1.7 -7.6 amidophosphoribosyltransferase compare
SMc01360 -1.6 -1.0 aspartate carbamoyltransferase catalytic subunit compare
SMc04002 -1.6 -8.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02365 -1.6 -7.3 protease precursor protein compare
SMc02985 -1.6 -11.9 hypothetical protein compare
SMc01342 -1.5 -5.9 hypothetical protein compare
SMc02510 -1.5 -1.4 ferric uptake regulation protein compare
SMc02897 -1.5 -3.5 cytochrome C transmembrane protein compare
SMc00404 -1.5 -1.9 hypothetical protein compare
SMc02753 -1.4 -2.1 PTS system transporter subunit IIA compare
SM_b20948 -1.4 -1.3 glucosyltransferase compare
SMc01221 -1.4 -7.1 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02856 -1.4 -9.3 penicillin-binding protein compare
SM_b20563 -1.4 -4.6 hypothetical protein compare
SMc04385 -1.4 -2.3 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc02867 -1.3 -4.5 multidrug-efflux system transmembrane protein compare
SM_b20942 -1.3 -4.8 UDP glucose 4-epimerase compare
SMc00010 -1.3 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc04000 -1.3 -1.4 hypothetical protein compare
SMc02425 -1.2 -3.4 transcriptional regulator compare
SMc02362 -1.2 -2.7 cytochrome c-type biogenesis protein CcmE compare
SMc01361 -1.2 -1.6 dihydroorotase compare
SMc03070 -1.2 -5.3 glucose-6-phosphate 1-dehydrogenase compare
SMc02833 -1.2 -2.3 penicillin-insensitive murein endopeptidase compare
SMc01012 -1.1 -2.2 hypothetical protein compare
SMc00450 -1.1 -1.6 protoheme IX farnesyltransferase compare
SMc00349 -1.1 -6.2 GTP-binding protein LepA compare
SMc01368 -1.1 -5.7 transport transmembrane protein compare
SMc00188 -1.1 -7.1 cytochrome B transmembrane protein compare
SMc02695 -1.1 -5.0 GTP-dependent nucleic acid-binding protein EngD compare
SMc02868 -1.1 -6.0 multidrug efflux system protein compare
SMc04383 -1.1 -2.9 putative hydrolase, required for lysine catabolism (from data) compare
SMc03780 -1.0 -2.6 hypothetical protein compare
SMc01768 -1.0 -4.1 transcriptional regulator compare
SMc02050 -1.0 -4.4 trigger factor compare
SMc00187 -1.0 -2.7 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00239 -1.0 -1.7 hypothetical protein compare
SMc01471 -1.0 -2.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMc03863 -1.0 -3.0 50S ribosomal protein L19 compare
SMc03229 -1.0 -2.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc03180 -1.0 -3.1 monovalent cation/H+ antiporter subunit C compare
SMc01242 -1.0 -2.2 signal peptide protein compare
SM_b20955 -0.9 -5.4 endo-beta-1,3-1,4-glycanase compare
SM_b20758 -0.9 -2.2 ArsR family transcriptional regulator compare
SMc04024 -0.9 -5.2 membrane-bound lytic murein transglycosylase compare
SMc00189 -0.8 -3.6 cytochrome C1 protein compare
SMc03935 -0.8 -7.2 hypothetical protein compare
SMc03850 -0.8 -0.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02846 -0.8 -3.6 sugar kinase compare
SMc00378 -0.8 -3.3 exodeoxyribonuclease VII large subunit compare
SMc02095 -0.8 -6.7 hypothetical protein compare
SMa0645 -0.8 -1.5 hypothetical protein compare
SMc00053 -0.8 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc01800 -0.8 -0.7 cytochrome C oxidase assembly transmembrane protein compare
SMc00085 -0.8 -4.5 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc04209 -0.8 -5.7 hypothetical protein compare
SMc01146 -0.8 -2.1 deoxyribonucleotide triphosphate pyrophosphatase compare
SM_b20258 -0.8 -2.8 transcriptional regulator compare
SMc03973 -0.8 -5.6 hypothetical protein compare
SMc00576 -0.8 -3.8 hypothetical protein compare
SM_b21170 -0.7 -5.0 guanylate kinase compare
SMc01153 -0.7 -1.5 enoyl-CoA hydratase compare
SMc03785 -0.7 -3.7 dinucleoside polyphosphate hydrolase compare
SM_b21175 -0.7 -0.9 phosphate uptake ABC transporter permease compare
SMc03183 -0.7 -2.8 monovalent cation/H+ antiporter subunit F compare
SMc00451 -0.7 -4.7 processing protease compare
SMc01454 -0.7 -4.5 hypothetical protein compare
SMc01765 -0.7 -2.0 hypothetical protein compare
SMc02051 -0.7 -1.3 hypothetical protein compare
SMc03179 -0.7 -5.9 monovalent cation/H+ antiporter subunit A compare
SMc03181 -0.7 -4.3 monovalent cation/H+ antiporter subunit D compare
SMc03182 -0.7 -3.8 pH adaptation potassium efflux system E transmembrane protein compare
SMc03053 -0.7 -2.0 flagellar biosynthesis protein FliQ compare
SMc03836 -0.7 -0.8 acyl-CoA thioesterase i protein compare
SM_b20752 -0.7 -5.0 3-hydroxyisobutyryl-CoA hydrolase compare
SMc04085 -0.7 -1.7 hypothetical protein compare
SMc01575 -0.6 -5.4 hypothetical protein compare
SM_b21509 -0.6 -1.4 plasmid stability protein compare
SMc03993 -0.6 -4.3 hypothetical protein compare
SMc02495 -0.6 -1.3 translaldolase compare
SMc00296 -0.6 -4.0 POLY3-hydroxybutyrate polymerase compare
SMa2215 -0.6 -1.9 GntR family transcriptional regulator compare
SMc00024 -0.6 -2.0 chromosome partition protein compare
SMa0760 -0.6 -1.8 FixT2 anti-kinase compare
SMc02234 -0.6 -1.4 hypothetical protein compare
SMc01110 -0.6 -3.2 DNA-binding protein compare
SMa1017 -0.6 -1.8 hypothetical protein compare
SMc02149 -0.6 -1.7 hypothetical protein compare
SMc00360 -0.6 -2.8 hypothetical protein compare
SM_b21191 -0.6 -3.6 surface saccharide ABC transporter ATP-binding/membrane spanning protein compare
SMc00948 -0.6 -4.5 glutamine synthetase compare
SMa2034 -0.6 -0.7 hypothetical protein compare
SMc00070 -0.6 -3.3 signal peptide protein compare
SMc00013 -0.6 -1.6 cytochrome C oxidase subunit III transmembrane protein compare
SMc03833 -0.6 -2.5 hypothetical protein compare
SMc01458 -0.6 -4.0 transporter compare
SMc00726 -0.6 -0.6 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc01842 -0.6 -1.7 methyltransferase transcription regulator protein compare
SMc01366 -0.6 -3.0 hypothetical protein compare
SMc01666 -0.6 -3.6 methionine gamma-lyase compare
SMc02719 -0.6 -0.9 transposase compare
SMc03773 -0.6 -3.5 hypothetical protein compare
SMc02862 -0.6 -2.1 Pit accessory protein compare
SMc00012 -0.5 -1.1 cytochrome C oxidase assembly protein compare
SM_b21377 -0.5 -3.3 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc03979 -0.5 -1.3 glyceraldehyde-3-phosphate dehydrogenase compare
SMc03124 -0.5 -1.8 periplasmic binding ABC transporter protein compare
SMc00513 -0.5 -3.7 amino acid-binding periplasmic protein compare
SMc04391 -0.5 -1.3 3-ketoacyl-ACP reductase compare
SM_b20294 -0.5 -0.7 transcriptional regulator NanR compare
SMc01880 -0.5 -0.5 pantoate--beta-alanine ligase compare
SMc01258 -0.5 -4.0 hypothetical protein compare
SMc01568 -0.5 -1.2 hypothetical protein compare
SMc02858 -0.5 -0.5 chaperone protein DnaJ compare
SMc04175 -0.5 -4.0 transmembrane protein compare
SMa1323 -0.5 -1.9 Transcription regulator compare
SMc03878 -0.5 -1.9 acetoacetyl-CoA reductase compare
SMc03046 -0.5 -3.7 transcriptional regulator compare
SM_b20509 -0.5 -2.2 transcriptional regulator compare
SMc01208 -0.5 -1.7 peptidyl-prolyl cis-trans isomerase B protein compare
SMc01881 -0.5 -0.9 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc02173 -0.5 -1.6 hypothetical protein compare
SMc03100 -0.5 -1.4 hypothetical protein compare
SMc04866 -0.5 -1.7 hypothetical protein compare
SMc03140 -0.5 -2.8 transcriptional regulator compare
SMa2011 -0.5 -2.3 hypothetical protein compare
SMc04384 -0.5 -2.3 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SM_b20015 -0.5 -3.3 sugar ABC transporter permease compare
SMc02713 -0.5 -1.6 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc02076 -0.5 -4.2 cardiolipin synthetase transmembrane protein compare
SM_b20806 -0.5 -1.5 hypothetical protein compare
SMc02543 -0.5 -3.1 hypothetical protein compare
SMa0121 -0.5 -2.1 hypothetical protein compare
SMa1240 -0.5 -0.9 NapF ferredoxin component of periplasmic nitrate reductase compare
SMa2091 -0.5 -1.8 hypothetical protein compare
SMc01007 -0.5 -1.4 hypothetical protein compare
SMc00698 -0.5 -1.2 transcriptional regulator compare
SM_b20021 -0.5 -0.8 transcriptional regulator compare
SMc04213 -0.5 -0.9 diacylglycerol kinase compare
SMc03016 -0.5 -3.7 transcriptional regulator compare
SMc01969 -0.5 -2.5 hypothetical protein compare
SM_b21347 -0.5 -1.5 pectin degradation protein compare
SMc01347 -0.4 -1.8 hypothetical protein compare
SMc03052 -0.4 -3.2 flagellar basal body rod modification protein compare
SMc04346 -0.4 -2.8 ketol-acid reductoisomerase compare
SMc00998 -0.4 -3.5 signal peptide protein compare
SMc03014 -0.4 -2.5 flagellar MS-ring protein compare
SM_b21487 -0.4 -3.4 cytochrome o ubiquinol oxidase subunit II compare
SMc02497 -0.4 -1.8 hypothetical protein compare
SMc02505 -0.4 -0.6 hypothetical protein compare
SMc01015 -0.4 -2.2 hypothetical protein compare
SMc02853 -0.4 -2.3 hypothetical protein compare
SM_b21100 -0.4 -1.9 polysaccharide deacetylase compare
SMc02709 -0.4 -2.0 hypothetical protein compare
SMc02361 -0.4 -1.3 cytochrome C-type biogenesis transmembrane protein compare
SMc04298 -0.4 -1.7 hypothetical protein compare
SM_b20909 -0.4 -1.3 hypothetical protein compare
SMa1780 -0.4 -3.0 hypothetical protein compare
SMc00733 -0.4 -2.7 short chain dehydrogenase compare
SMa1578 -0.4 -1.8 CpaA2 pilus assembly protein compare
SMc01782 -0.4 -2.7 hypothetical protein compare
SMa2085 -0.4 -2.1 ABC transporter permease compare
SMc04319 -0.4 -1.5 hypothetical protein compare
SMc04043 -0.4 -2.8 hypothetical protein compare
SMc02904 -0.4 -1.5 hypothetical protein compare
SM_b20219 -0.4 -1.8 response regulator protein compare
SMc00241 -0.4 -1.0 transcriptional regulator compare
SMc02884 -0.4 -3.3 lipoprotein compare
SM_b20883 -0.4 -1.5 hypothetical protein compare
SMc03010 -0.4 -1.0 chemotaxis-specific methylesterase compare
SM_b20595 -0.4 -2.2 cell division protein FtsK compare
SMc03128 -0.4 -1.6 ABC transporter permease compare
SMc00470 -0.4 -1.8 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment