Experiment set6IT007 for Klebsiella michiganensis M5al

Compare to:

L-Threonine nitrogen source

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -7.1 -4.7 tyrosine recombinase XerC compare
BWI76_RS05835 -6.3 -4.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS08385 -5.7 -3.3 citrate (Si)-synthase compare
BWI76_RS20895 -5.1 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05015 -5.1 -3.5 transcriptional regulator compare
BWI76_RS04470 -4.9 -10.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS20380 -4.9 -1.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS07070 -4.8 -5.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS25115 -4.8 -8.6 argininosuccinate synthase compare
BWI76_RS11965 -4.7 -4.3 orotidine-5'-phosphate decarboxylase compare
BWI76_RS00385 -4.7 -8.8 nitrogen assimilation regulatory protein compare
BWI76_RS09645 -4.7 -1.8 thioredoxin-disulfide reductase compare
BWI76_RS25320 -4.7 -11.2 glutamate synthase compare
BWI76_RS23360 -4.6 -4.5 diaminopimelate decarboxylase compare
BWI76_RS04465 -4.6 -6.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS10990 -4.5 -2.5 dihydroorotase compare
BWI76_RS18930 -4.5 -5.1 histidinol-phosphate transaminase compare
BWI76_RS00855 -4.4 -10.4 argininosuccinate lyase compare
BWI76_RS02530 -4.3 -3.0 tRNA dimethylallyltransferase compare
BWI76_RS18940 -4.2 -4.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11845 -4.2 -2.3 tryptophan synthase subunit beta compare
BWI76_RS18935 -4.2 -7.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00400 -4.1 -2.6 glutamine synthetase compare
BWI76_RS18920 -4.0 -3.7 ATP phosphoribosyltransferase compare
BWI76_RS18925 -4.0 -6.3 histidinol dehydrogenase compare
BWI76_RS25315 -4.0 -11.8 glutamate synthase large subunit compare
BWI76_RS05840 -4.0 -7.1 glutamate 5-kinase compare
BWI76_RS02995 -3.9 -6.5 aspartate carbamoyltransferase compare
BWI76_RS18950 -3.8 -4.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21265 -3.8 -12.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS27385 -3.7 -8.9 orotate phosphoribosyltransferase compare
BWI76_RS06525 -3.7 -5.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS00390 -3.6 -6.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS09910 -3.6 -15.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS20965 -3.6 -5.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00990 -3.5 -9.6 ketol-acid reductoisomerase compare
BWI76_RS04675 -3.5 -6.6 3-isopropylmalate dehydrogenase compare
BWI76_RS06530 -3.5 -6.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS11850 -3.4 -6.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS08525 -3.3 -4.2 colicin transporter compare
BWI76_RS11840 -3.3 -6.7 tryptophan synthase subunit alpha compare
BWI76_RS05985 -3.3 -6.0 branched-chain amino acid ABC transporter permease compare
BWI76_RS00975 -3.3 -7.2 dihydroxy-acid dehydratase compare
BWI76_RS20350 -3.3 -5.5 amidophosphoribosyltransferase compare
BWI76_RS19840 -3.3 -1.8 hypothetical protein compare
BWI76_RS03010 -3.2 -9.8 ornithine carbamoyltransferase compare
BWI76_RS00845 -3.2 -9.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS09660 -3.2 -2.2 DNA translocase FtsK compare
BWI76_RS08180 -3.1 -8.4 asparagine synthase B compare
BWI76_RS20355 -3.1 -3.6 colicin V production protein compare
BWI76_RS05075 -3.1 -1.7 type II secretion system protein GspG compare
BWI76_RS00850 -3.1 -8.5 acetylglutamate kinase compare
BWI76_RS09970 -3.1 -4.0 porin OmpA compare
BWI76_RS01615 -3.1 -10.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21465 -3.0 -5.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS01610 -2.9 -7.1 phosphoribosylamine--glycine ligase compare
BWI76_RS23230 -2.9 -3.9 exodeoxyribonuclease V subunit beta compare
BWI76_RS18630 -2.8 -8.5 nitrogen assimilation transcriptional regulator compare
BWI76_RS22755 -2.8 -5.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08535 -2.7 -3.2 translocation protein TolB compare
BWI76_RS11860 -2.7 -4.9 anthranilate synthase component I compare
BWI76_RS27390 -2.7 -3.2 ribonuclease PH compare
BWI76_RS27430 -2.6 -1.4 (p)ppGpp synthetase compare
BWI76_RS22690 -2.6 -4.2 adenylyl-sulfate kinase compare
BWI76_RS05995 -2.6 -7.2 branched-chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS00835 -2.5 -10.3 phosphoenolpyruvate carboxylase compare
BWI76_RS04665 -2.5 -14.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS17345 -2.5 -5.9 nitrate/nitrite two-component system sensor histidine kinase NarX compare
BWI76_RS15825 -2.4 -2.8 hypothetical protein compare
BWI76_RS25960 -2.4 -4.4 NUDIX hydrolase compare
BWI76_RS20435 -2.4 -1.2 chorismate synthase compare
BWI76_RS00980 -2.4 -8.3 PLP-dependent threonine dehydratase compare
BWI76_RS23240 -2.4 -3.9 exonuclease V subunit gamma compare
BWI76_RS19850 -2.3 -2.0 tRNA-Pro compare
BWI76_RS17975 -2.3 -6.3 tail-specific protease compare
BWI76_RS08520 -2.3 -3.1 colicin transporter TolQ compare
BWI76_RS04685 -2.2 -7.0 putative leucine operon leader peptide compare
BWI76_RS07065 -2.2 -3.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05990 -2.2 -5.0 branched-chain amino acid ABC transporter permease compare
BWI76_RS17720 -2.2 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04670 -2.2 -6.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04680 -2.1 -11.0 2-isopropylmalate synthase compare
BWI76_RS17980 -2.1 -3.8 RNA chaperone ProQ compare
BWI76_RS21370 -2.1 -2.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS19845 -2.1 -4.5 phosphatase compare
BWI76_RS26055 -2.1 -4.9 siroheme synthase compare
BWI76_RS09760 -2.0 -4.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23220 -2.0 -5.3 amino-acid N-acetyltransferase compare
BWI76_RS00575 -2.0 -8.4 DNA-binding protein compare
BWI76_RS04305 -2.0 -1.5 molecular chaperone DnaJ compare
BWI76_RS05980 -2.0 -5.5 ABC transporter ATP-binding protein compare
BWI76_RS18715 -1.9 -7.4 hypothetical protein compare
BWI76_RS00345 -1.9 -4.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS00805 -1.9 -3.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05975 -1.9 -6.1 ABC transporter ATP-binding protein compare
BWI76_RS26570 -1.8 -3.3 anion permease compare
BWI76_RS18710 -1.8 -10.1 GGDEF-domain containing protein compare
BWI76_RS25280 -1.8 -2.0 RNase adaptor protein RapZ compare
BWI76_RS24025 -1.8 -9.2 agmatinase compare
BWI76_RS15760 -1.8 -1.8 hypothetical protein compare
BWI76_RS15835 -1.8 -1.1 hypothetical protein compare
BWI76_RS25060 -1.8 -4.2 lipoprotein NlpI compare
BWI76_RS25065 -1.8 -3.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS27820 -1.8 -1.9 ilvB operon leader peptide IvbL compare
BWI76_RS00970 -1.7 -3.1 branched chain amino acid aminotransferase compare
BWI76_RS11855 -1.7 -3.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS23265 -1.7 -3.7 hypothetical protein compare
BWI76_RS05200 -1.7 -2.1 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04605 -1.7 -1.5 thiamine ABC transporter ATP-binding protein compare
BWI76_RS16965 -1.7 -4.3 murein lipoprotein compare
BWI76_RS23920 -1.6 -5.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS05120 -1.6 -9.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS06605 -1.6 -4.1 ammonium transporter compare
BWI76_RS04645 -1.5 -5.2 3-dehydroquinase compare
BWI76_RS19330 -1.5 -1.3 HAD family hydrolase compare
BWI76_RS09755 -1.5 -5.0 phosphoserine transaminase compare
BWI76_RS26085 -1.5 -1.2 3-dehydroquinate synthase compare
BWI76_RS23880 -1.5 -5.3 Aminomethyltransferase (EC 2.1.2.10) (from data) conserved
BWI76_RS13980 -1.4 -1.8 hypothetical protein compare
BWI76_RS00960 -1.4 -2.6 acetolactate synthase 2 catalytic subunit compare
BWI76_RS04160 -1.4 -4.0 phosphoserine phosphatase compare
BWI76_RS11610 -1.4 -2.2 glutamate dehydrogenase compare
BWI76_RS20495 -1.4 -7.4 alanine transaminase compare
BWI76_RS10835 -1.4 -1.5 hypothetical protein compare
BWI76_RS20880 -1.4 -2.3 esterase compare
BWI76_RS15060 -1.4 -2.6 MarR family transcriptional regulator compare
BWI76_RS23870 -1.4 -6.1 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) conserved
BWI76_RS27255 -1.3 -6.3 2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) (from data) compare
BWI76_RS03595 -1.3 -1.3 ethanolamine utilization protein EutM compare
BWI76_RS05570 -1.3 -1.1 hypothetical protein compare
BWI76_RS15990 -1.3 -4.5 serine protease compare
BWI76_RS13545 -1.3 -1.5 N-acetyltransferase compare
BWI76_RS19870 -1.3 -2.4 malate:quinone oxidoreductase compare
BWI76_RS00965 -1.3 -1.2 acetolactate synthase 2 small subunit compare
BWI76_RS25070 -1.3 -1.3 hypothetical protein compare
BWI76_RS08530 -1.3 -2.1 protein TolA compare
BWI76_RS02735 -1.2 -2.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS15950 -1.2 -1.8 dethiobiotin synthase compare
BWI76_RS20970 -1.2 -1.3 phosphoribosylglycinamide formyltransferase compare
BWI76_RS23020 -1.2 -1.8 cobalamin biosynthesis protein CbiQ compare
BWI76_RS16935 -1.2 -1.5 shikimate dehydrogenase compare
BWI76_RS18955 -1.2 -2.2 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS06000 -1.2 -7.4 ethanolamine ammonia-lyase small subunit compare
BWI76_RS06595 -1.2 -1.9 hypothetical protein compare
BWI76_RS09870 -1.2 -5.2 aromatic amino acid aminotransferase compare
BWI76_RS01205 -1.2 -1.8 DUF484 family protein compare
BWI76_RS06005 -1.2 -5.1 ethanolamine ammonia lyase large subunit compare
BWI76_RS21450 -1.2 -2.3 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS08405 -1.1 -2.8 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS20145 -1.1 -1.7 NADH-quinone oxidoreductase subunit K compare
BWI76_RS24500 -1.1 -1.1 urease subunit gamma compare
BWI76_RS20640 -1.1 -3.9 cysteine synthase A compare
BWI76_RS25485 -1.1 -1.5 septum formation protein Maf compare
BWI76_RS11750 -1.1 -1.5 chitooligosaccharide deacetylase compare
BWI76_RS11155 -1.1 -1.2 penicillin-binding protein activator LpoB compare
BWI76_RS27745 -1.1 -1.9 PTS sugar transporter subunit IIB compare
BWI76_RS01065 -1.1 -3.2 ATP-dependent RNA helicase RhlB compare
BWI76_RS06765 -1.1 -3.3 transcriptional regulator compare
BWI76_RS11410 -1.1 -1.3 leucine efflux protein compare
BWI76_RS04270 -1.1 -2.5 transaldolase compare
BWI76_RS15840 -1.1 -2.6 prophage protein compare
BWI76_RS15635 -1.1 -3.1 hypothetical protein compare
BWI76_RS10755 -1.1 -1.1 pyrimidine utilization flavin reductase protein F compare
BWI76_RS23480 -1.1 -6.6 EAL domain-containing protein compare
BWI76_RS15830 -1.1 -2.0 hypothetical protein compare
BWI76_RS15850 -1.1 -1.1 DUF1317 domain-containing protein compare
BWI76_RS01060 -1.1 -5.8 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase compare
BWI76_RS13595 -1.1 -3.3 transcriptional regulator compare
BWI76_RS15660 -1.1 -0.8 hypothetical protein compare
BWI76_RS25505 -1.1 -4.6 RNase E specificity factor CsrD compare
BWI76_RS09315 -1.0 -1.8 hypothetical protein compare
BWI76_RS08925 -1.0 -3.4 DNA-binding protein YbiB compare
BWI76_RS04050 -1.0 -2.6 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS02410 -1.0 -1.3 EF-P beta-lysylation protein EpmB compare
BWI76_RS24910 -1.0 -3.8 rRNA (cytidine-2'-O-)-methyltransferase compare
BWI76_RS25600 -1.0 -1.0 tRNA-Thr compare
BWI76_RS13370 -1.0 -3.3 hypothetical protein compare
BWI76_RS15600 -1.0 -1.9 hypothetical protein compare
BWI76_RS06535 -1.0 -4.3 endopeptidase La compare
BWI76_RS12590 -1.0 -2.8 helix-turn-helix-type transcriptional regulator compare
BWI76_RS26205 -1.0 -2.1 glucose-1-phosphate adenylyltransferase compare
BWI76_RS09615 -1.0 -1.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS14650 -1.0 -2.0 helix-turn-helix transcriptional regulator compare
BWI76_RS24770 -1.0 -2.6 hypothetical protein compare
BWI76_RS23340 -1.0 -1.5 transcriptional regulator compare
BWI76_RS00940 -0.9 -3.6 transcriptional regulator HdfR compare
BWI76_RS00840 -0.9 -5.7 acetylornithine deacetylase compare
BWI76_RS15630 -0.9 -3.9 hypothetical protein compare
BWI76_RS11880 -0.9 -3.7 23S rRNA pseudouridylate synthase B compare
BWI76_RS26830 -0.9 -3.2 endoglucanase compare
BWI76_RS20900 -0.9 -1.1 outer membrane protein assembly factor BamC compare
BWI76_RS10770 -0.9 -2.0 pyrimidine utilization protein C compare
BWI76_RS23875 -0.9 -1.8 glycine cleavage system protein H compare
BWI76_RS00795 -0.9 -1.1 carboxymuconolactone decarboxylase compare
BWI76_RS21070 -0.9 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS15810 -0.9 -3.1 hypothetical protein compare
BWI76_RS00440 -0.9 -1.1 CopG family transcriptional regulator compare
BWI76_RS11700 -0.9 -1.1 hypothetical protein compare
BWI76_RS27940 -0.9 -2.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS27250 -0.9 -5.1 L-threonine 3-dehydrogenase compare


Specific Phenotypes

For 18 genes in this experiment

For nitrogen source L-Threonine in Klebsiella michiganensis M5al

For nitrogen source L-Threonine across organisms