Experiment set6IT007 for Bifidobacterium breve UCC2003

Compare to:

Recovery broth at 45C

200 most detrimental genes:

  gene name fitness t score description  
BBR_RS16275 +1.0 2.3 leucine--tRNA ligase compare
BBR_RS14715 +0.9 1.9 XRE family transcriptional regulator compare
BBR_RS13300 +0.9 1.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BBR_RS11590 +0.9 1.3 30S ribosomal protein S18 compare
BBR_RS19390 +0.8 1.9 hypothetical protein compare
BBR_RS13945 +0.6 2.2 Txe/YoeB family addiction module toxin compare
BBR_RS20790 +0.5 3.0 hypothetical protein compare
BBR_RS11145 +0.5 2.0 hypothetical protein compare
BBR_RS17155 +0.5 1.0 cell division protein SepF compare
BBR_RS16905 +0.5 2.5 hypothetical protein compare
BBR_RS15415 +0.4 2.2 choloylglycine hydrolase compare
BBR_RS15385 +0.4 1.6 hypothetical protein compare
BBR_RS16960 +0.4 1.5 transcriptional regulator MraZ compare
BBR_RS13030 +0.4 0.7 cell division ATP-binding protein FtsE compare
BBR_RS17190 +0.4 2.0 transcriptional regulator compare
BBR_RS12855 +0.4 2.2 glycine cleavage system protein H compare
BBR_RS13910 +0.4 0.7 arginine repressor compare
BBR_RS16530 +0.4 1.8 recombinase RecA compare
BBR_RS14790 +0.4 2.6 phosphorylase compare
BBR_RS14970 +0.4 1.2 transcriptional regulator compare
BBR_RS14895 +0.4 2.0 DUF47 domain-containing protein compare
BBR_RS14840 +0.4 1.5 IS3 family transposase compare
BBR_RS12925 +0.4 1.7 hypothetical protein compare
BBR_RS17775 +0.4 2.1 LacI family DNA-binding transcriptional regulator compare
BBR_RS21055 +0.4 1.8 hypothetical protein compare
BBR_RS15020 +0.4 1.0 membrane protein compare
BBR_RS16075 +0.4 1.7 hypothetical protein compare
BBR_RS16490 +0.3 1.6 polyprenyl synthase compare
BBR_RS19330 +0.3 1.8 hypothetical protein compare
BBR_RS18135 +0.3 2.1 hypothetical protein compare
BBR_RS15750 +0.3 0.7 hypothetical protein compare
BBR_RS15940 +0.3 1.9 hypothetical protein compare
BBR_RS12940 +0.3 2.1 hypothetical protein compare
BBR_RS11640 +0.3 0.6 hypothetical protein compare
BBR_RS13960 +0.3 0.9 thiamine biosynthesis protein ThiS compare
BBR_RS11970 +0.3 1.2 Phage transcriptional regulator compare
BBR_RS13320 +0.3 1.9 ABC transporter ATP-binding protein compare
BBR_RS19095 +0.3 2.6 magnesium transporter compare
BBR_RS15030 +0.3 1.5 mRNA interferase PemK compare
BBR_RS16900 +0.3 1.3 D-tyrosyl-tRNA(Tyr) deacylase compare
BBR_RS20735 +0.3 1.8 hypothetical protein compare
BBR_RS16380 +0.3 1.5 hypothetical protein compare
BBR_RS14720 +0.3 2.2 MFS transporter compare
BBR_RS14455 +0.3 1.7 ABC transporter permease compare
BBR_RS20085 +0.3 2.2 histidine phosphatase family protein compare
BBR_RS13935 +0.3 1.5 hypothetical protein compare
BBR_RS20715 +0.3 1.5 hypothetical protein compare
BBR_RS12400 +0.3 2.4 nicotinate phosphoribosyltransferase compare
BBR_RS14890 +0.3 1.8 inorganic phosphate transporter compare
BBR_RS13980 +0.3 1.3 HD domain-containing protein compare
BBR_RS14350 +0.3 1.2 hypothetical protein compare
BBR_RS14950 +0.3 1.7 Pyrazinamidase/Nicotinamidase compare
BBR_RS14545 +0.3 1.6 TIGR00730 family Rossman fold protein compare
BBR_RS14420 +0.3 1.3 ribosome silencing factor compare
BBR_RS15795 +0.3 1.1 phosphoribosyl-ATP diphosphatase compare
BBR_RS19030 +0.3 2.3 LacI family transcriptional regulator compare
BBR_RS12575 +0.3 1.5 hypothetical protein compare
BBR_RS13330 +0.2 1.3 hypothetical protein compare
BBR_RS20710 +0.2 1.4 hypothetical protein compare
BBR_RS14875 +0.2 1.6 uracil-xanthine permease compare
BBR_RS21050 +0.2 1.4 hypothetical protein compare
BBR_RS20770 +0.2 1.2 30S ribosomal protein S14 compare
BBR_RS11550 +0.2 1.7 hypothetical protein compare
BBR_RS17220 +0.2 1.3 thiamine-binding protein compare
BBR_RS12550 +0.2 2.1 sugar transferase compare
BBR_RS17520 +0.2 1.2 hypothetical protein compare
BBR_RS14325 +0.2 1.1 NUDIX hydrolase compare
BBR_RS14470 +0.2 1.1 hypothetical protein compare
BBR_RS17085 +0.2 1.5 KR domain-containing protein compare
BBR_RS11185 +0.2 0.7 type I DNA topoisomerase compare
BBR_RS17185 +0.2 1.7 hypothetical protein compare
BBR_RS14925 +0.2 1.5 ABC transporter permease compare
BBR_RS10805 +0.2 2.0 LacI family transcriptional regulator compare
BBR_RS12680 +0.2 0.9 hypothetical protein compare
BBR_RS13850 +0.2 1.2 ABC transporter permease compare
BBR_RS13445 +0.2 1.8 phosphoribosylformylglycinamidine synthase compare
BBR_RS18985 +0.2 2.1 4-alpha-glucanotransferase compare
BBR_RS11835 +0.2 1.5 ribbon-helix-helix protein, CopG family compare
BBR_RS13390 +0.2 1.0 hypothetical protein compare
BBR_RS18320 +0.2 1.2 hypothetical protein compare
BBR_RS17090 +0.2 1.5 mandelate racemase compare
BBR_RS20755 +0.2 0.9 IS3 family transposase compare
BBR_RS15755 +0.2 0.5 hypothetical protein compare
BBR_RS14850 +0.2 0.6 VOC family protein compare
BBR_RS15380 +0.2 1.4 thiaminase II compare
BBR_RS14845 +0.2 0.9 permease compare
BBR_RS18035 +0.2 0.8 oligoribonuclease compare
BBR_RS15260 +0.2 1.3 glutamate synthase subunit beta compare
BBR_RS16285 +0.2 1.2 magnesium transporter CorA family protein compare
BBR_RS13450 +0.2 0.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BBR_RS14880 +0.2 1.2 ATP-dependent helicase compare
BBR_RS15475 +0.2 1.4 Histidinol-phosphatase (EC 3.1.3.15) (from data) compare
BBR_RS16300 +0.2 1.1 pyridoxamine 5'-phosphate oxidase family protein compare
BBR_RS15895 +0.2 1.0 hypothetical protein compare
BBR_RS12125 +0.2 1.0 transposase compare
BBR_RS13335 +0.2 1.4 transcriptional repressor compare
BBR_RS18175 +0.2 0.4 GTP cyclohydrolase I FolE compare
BBR_RS12435 +0.2 1.7 ABC transporter ATP-binding protein compare
BBR_RS17425 +0.2 1.5 cytosine deaminase compare
BBR_RS20750 +0.2 0.7 GntR family transcriptional regulator compare
BBR_RS13375 +0.2 1.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BBR_RS16035 +0.2 0.8 hypothetical protein compare
BBR_RS13880 +0.2 1.3 hypothetical protein compare
BBR_RS16185 +0.2 1.4 transposase compare
BBR_RS15190 +0.2 1.0 NAD(P) transhydrogenase subunit alpha compare
BBR_RS14520 +0.2 0.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BBR_RS15980 +0.2 1.2 Lantibiotic transport ATP-binding protein compare
BBR_RS17865 +0.2 0.9 MarR family transcriptional regulator compare
BBR_RS20250 +0.2 1.2 transcriptional regulator compare
BBR_RS20660 +0.2 1.1 hypothetical protein compare
BBR_RS16810 +0.2 1.5 aldose 1-epimerase compare
BBR_RS13245 +0.2 1.6 LacI family transcriptional regulator compare
BBR_RS11240 +0.2 0.6 GtrA family protein compare
BBR_RS21135 +0.2 1.4 hypothetical protein compare
BBR_RS20810 +0.2 0.5 pirin compare
BBR_RS15345 +0.2 1.0 transporter compare
BBR_RS13205 +0.2 1.6 PLP-dependent aminotransferase family protein compare
BBR_RS16025 +0.2 1.1 hypothetical protein compare
BBR_RS13200 +0.2 1.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
BBR_RS13165 +0.2 1.5 amino acid permease compare
BBR_RS12470 +0.2 1.6 long-chain fatty acid--CoA ligase compare
BBR_RS18005 +0.2 1.0 hypothetical protein compare
BBR_RS16980 +0.2 0.8 LysM peptidoglycan-binding domain-containing protein compare
BBR_RS15950 +0.2 1.1 ABC transporter ATP-binding protein compare
BBR_RS16525 +0.2 1.1 RecX family transcriptional regulator compare
BBR_RS17225 +0.2 1.5 MFS transporter compare
BBR_RS13210 +0.2 1.0 anion transporter compare
BBR_RS18770 +0.2 1.5 hypothetical protein compare
BBR_RS16030 +0.2 1.0 hypothetical protein compare
BBR_RS18800 +0.2 0.9 50S ribosomal protein L17 compare
BBR_RS17265 +0.2 1.4 beta-fructofuranosidase compare
BBR_RS20060 +0.2 1.2 DUF624 domain-containing protein compare
BBR_RS19360 +0.2 1.1 hypothetical protein compare
BBR_RS20545 +0.2 1.0 hypothetical protein compare
BBR_RS14585 +0.2 0.3 hypothetical protein compare
BBR_RS13325 +0.2 0.7 hypothetical protein compare
BBR_RS14065 +0.2 0.8 TnpV protein compare
BBR_RS13355 +0.2 1.2 ABC transporter substrate-binding protein compare
BBR_RS14735 +0.2 0.9 TetR family transcriptional regulator compare
BBR_RS14425 +0.2 1.1 histidine phosphatase family protein compare
BBR_RS11840 +0.2 1.2 hypothetical protein compare
BBR_RS14535 +0.2 1.0 pyridoxal phosphate-dependent aminotransferase compare
BBR_RS12505 +0.2 0.5 ABC transporter permease compare
BBR_RS19855 +0.2 1.1 hypothetical protein compare
BBR_RS14225 +0.2 0.8 ComF family protein compare
BBR_RS12480 +0.2 0.9 arabinose-proton symporter compare
BBR_RS14315 +0.2 0.9 DNA polymerase I compare
BBR_RS14460 +0.2 1.2 amidohydrolase compare
BBR_RS14860 +0.2 1.3 MFS transporter compare
BBR_RS17570 +0.2 1.2 ribulose-phosphate 3-epimerase compare
BBR_RS14765 +0.2 0.2 hypothetical protein compare
BBR_RS18420 +0.2 1.0 hypothetical protein compare
BBR_RS14055 +0.2 0.9 ABC-2 transporter permease compare
BBR_RS15790 +0.1 0.8 ATP phosphoribosyltransferase compare
BBR_RS10510 +0.1 1.4 GGDEF domain-containing protein compare
BBR_RS17930 +0.1 1.1 flavodoxin family protein compare
BBR_RS15910 +0.1 1.0 ABC transporter substrate-binding protein compare
BBR_RS18110 +0.1 1.0 peptide deformylase compare
BBR_RS19270 +0.1 0.2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase compare
BBR_RS15045 +0.1 0.9 histidine phosphatase family protein compare
BBR_RS16580 +0.1 1.0 EamA/RhaT family transporter compare
BBR_RS17940 +0.1 0.9 large conductance mechanosensitive channel protein MscL compare
BBR_RS15015 +0.1 0.5 cytidine deaminase compare
BBR_RS17625 +0.1 0.8 HAD family phosphatase compare
BBR_RS16560 +0.1 1.1 hypothetical protein compare
BBR_RS14865 +0.1 0.9 haloacid dehalogenase-like hydrolase compare
BBR_RS17690 +0.1 0.9 CRISPR-associated endonuclease Cas2 compare
BBR_RS15100 +0.1 1.2 murein L,D-transpeptidase compare
BBR_RS15075 +0.1 0.9 peptidase A24 compare
BBR_RS13185 +0.1 0.9 PIN domain-containing protein compare
BBR_RS12040 +0.1 1.2 peptidyl-prolyl cis-trans isomerase compare
BBR_RS16540 +0.1 0.8 XRE family transcriptional regulator compare
BBR_RS17480 +0.1 0.8 hypothetical protein compare
BBR_RS19825 +0.1 1.2 HD domain-containing protein compare
BBR_RS15390 +0.1 0.8 phospholipase compare
BBR_RS17150 +0.1 0.6 YggT family protein compare
BBR_RS14130 +0.1 0.3 septum formation initiator family protein compare
BBR_RS18055 +0.1 1.0 ABC transporter ATP-binding protein compare
BBR_RS11220 +0.1 1.2 YbhB/YbcL family Raf kinase inhibitor-like protein compare
BBR_RS12200 +0.1 1.1 hypothetical protein compare
BBR_RS16895 +0.1 0.9 MFS transporter compare
BBR_RS20655 +0.1 0.8 hypothetical protein compare
BBR_RS15500 +0.1 0.8 cobalt ABC transporter permease compare
BBR_RS16165 +0.1 0.6 M23 family peptidase compare
BBR_RS16060 +0.1 0.4 hypothetical protein compare
BBR_RS13050 +0.1 1.0 ABC transporter substrate-binding protein compare
BBR_RS16080 +0.1 0.3 DUF1287 domain-containing protein compare
BBR_RS15405 +0.1 1.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BBR_RS19275 +0.1 1.2 laccase domain-containing protein compare
BBR_RS14155 +0.1 0.9 L-serine ammonia-lyase compare
BBR_RS15640 +0.1 0.6 HIT domain-containing protein compare
BBR_RS16355 +0.1 0.9 sugar ABC transporter permease compare
BBR_RS17130 +0.1 0.9 WYL domain-containing protein compare
BBR_RS10335 +0.1 1.0 hypothetical protein compare
BBR_RS11555 +0.1 1.1 AarF/ABC1/UbiB kinase family protein compare
BBR_RS14755 +0.1 0.7 XRE family transcriptional regulator compare
BBR_RS17080 +0.1 0.8 hypothetical protein compare
BBR_RS16145 +0.1 0.6 hypothetical protein compare
BBR_RS15560 +0.1 0.8 aminotransferase class V-fold PLP-dependent enzyme compare
BBR_RS11200 +0.1 1.0 LacI family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Bifidobacterium breve UCC2003 in temperature experiments