Experiment set6IT006 for Bifidobacterium breve UCC2003

Compare to:

Recovery broth at 45C

200 most detrimental genes:

  gene name fitness t score description  
BBR_RS16080 +0.7 1.9 DUF1287 domain-containing protein compare
BBR_RS20830 +0.7 2.7 hypothetical protein compare
BBR_RS13945 +0.6 1.7 Txe/YoeB family addiction module toxin compare
BBR_RS19390 +0.6 0.9 hypothetical protein compare
BBR_RS16275 +0.6 1.4 leucine--tRNA ligase compare
BBR_RS20870 +0.5 1.9 hypothetical protein compare
BBR_RS19270 +0.5 0.9 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase compare
BBR_RS14330 +0.5 1.0 glycogen debranching enzyme GlgX compare
BBR_RS19030 +0.5 4.7 LacI family transcriptional regulator compare
BBR_RS16015 +0.5 2.4 DUF2089 domain-containing protein compare
BBR_RS18135 +0.4 3.1 hypothetical protein compare
BBR_RS17440 +0.4 1.2 DUF3027 domain-containing protein compare
BBR_RS11595 +0.4 1.9 50S ribosomal protein L9 compare
BBR_RS10805 +0.4 3.6 LacI family transcriptional regulator compare
BBR_RS18525 +0.4 1.8 hypothetical protein compare
BBR_RS14065 +0.4 1.9 TnpV protein compare
BBR_RS14545 +0.4 2.0 TIGR00730 family Rossman fold protein compare
BBR_RS20785 +0.4 1.5 PadR family transcriptional regulator compare
BBR_RS11240 +0.4 1.5 GtrA family protein compare
BBR_RS20775 +0.4 0.7 DUF4230 domain-containing protein compare
BBR_RS14765 +0.4 0.5 hypothetical protein compare
BBR_RS12940 +0.4 2.3 hypothetical protein compare
BBR_RS18485 +0.4 1.8 IS30 family transposase compare
BBR_RS16060 +0.3 1.3 hypothetical protein compare
BBR_RS20625 +0.3 2.0 hypothetical protein compare
BBR_RS18175 +0.3 0.6 GTP cyclohydrolase I FolE compare
BBR_RS17775 +0.3 1.7 LacI family DNA-binding transcriptional regulator compare
BBR_RS13505 +0.3 1.9 DUF4391 domain-containing protein compare
BBR_RS13525 +0.3 1.6 CrcB family protein compare
BBR_RS12490 +0.3 1.8 hypothetical protein compare
BBR_RS13210 +0.3 2.0 anion transporter compare
BBR_RS12855 +0.3 2.0 glycine cleavage system protein H compare
BBR_RS13850 +0.3 1.5 ABC transporter permease compare
BBR_RS14985 +0.3 0.9 ATP-dependent DNA helicase PcrA compare
BBR_RS10890 +0.3 2.4 LacI family transcriptional regulator compare
BBR_RS16105 +0.3 1.7 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
BBR_RS15140 +0.3 1.9 RNA methyltransferase compare
BBR_RS16845 +0.3 0.6 bifunctional folylpolyglutamate synthase/dihydrofolate synthase compare
BBR_RS20695 +0.3 1.3 hypothetical protein compare
BBR_RS13355 +0.3 1.9 ABC transporter substrate-binding protein compare
BBR_RS14020 +0.3 1.7 TrkA family potassium uptake protein compare
BBR_RS14455 +0.3 1.7 ABC transporter permease compare
BBR_RS15325 +0.3 1.2 hypothetical protein compare
BBR_RS13450 +0.3 0.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BBR_RS17690 +0.3 1.8 CRISPR-associated endonuclease Cas2 compare
BBR_RS14945 +0.3 1.7 peptidase E compare
BBR_RS16145 +0.3 1.6 hypothetical protein compare
BBR_RS12370 +0.3 0.4 cell division protein compare
BBR_RS15685 +0.3 2.1 hypothetical protein compare
BBR_RS12860 +0.3 2.2 DUF2183 domain-containing protein compare
BBR_RS15640 +0.3 1.4 HIT domain-containing protein compare
BBR_RS15330 +0.3 1.1 hypothetical protein compare
BBR_RS12440 +0.3 2.2 Permease of ABC transporter system compare
BBR_RS14965 +0.2 1.1 DUF2975 domain-containing protein compare
BBR_RS17260 +0.2 1.5 Sucrose permease compare
BBR_RS13705 +0.2 1.7 Conserved hypothetical membrane spanning protein, contains a vitamin K epoxide reductase domain compare
BBR_RS17865 +0.2 1.3 MarR family transcriptional regulator compare
BBR_RS15790 +0.2 1.8 ATP phosphoribosyltransferase compare
BBR_RS17530 +0.2 1.6 Permease of ABC transporter system compare
BBR_RS13255 +0.2 1.4 hypothetical protein compare
BBR_RS18005 +0.2 1.6 hypothetical protein compare
BBR_RS15335 +0.2 1.3 hypothetical protein compare
BBR_RS15170 +0.2 1.7 HlyC/CorC family transporter compare
BBR_RS14755 +0.2 1.3 XRE family transcriptional regulator compare
BBR_RS20615 +0.2 1.4 GNAT family N-acetyltransferase compare
BBR_RS19370 +0.2 1.1 type I polyketide synthase compare
BBR_RS19375 +0.2 0.4 acyl-CoA carboxylase subunit beta compare
BBR_RS15345 +0.2 1.4 transporter compare
BBR_RS17600 +0.2 1.6 HAD family phosphatase compare
BBR_RS14015 +0.2 1.1 hypothetical protein compare
BBR_RS16445 +0.2 1.3 hypothetical protein compare
BBR_RS13410 +0.2 1.7 hypothetical protein compare
BBR_RS14890 +0.2 1.6 inorganic phosphate transporter compare
BBR_RS14505 +0.2 0.9 hypothetical protein compare
BBR_RS14865 +0.2 1.5 haloacid dehalogenase-like hydrolase compare
BBR_RS13985 +0.2 1.2 membrane protein compare
BBR_RS14715 +0.2 0.6 XRE family transcriptional regulator compare
BBR_RS15880 +0.2 0.8 hypothetical protein compare
BBR_RS13325 +0.2 0.8 hypothetical protein compare
BBR_RS14950 +0.2 1.4 Pyrazinamidase/Nicotinamidase compare
BBR_RS11715 +0.2 1.9 N-acetyltransferase compare
BBR_RS16545 +0.2 1.4 CinA family protein compare
BBR_RS16010 +0.2 0.9 hypothetical protein compare
BBR_RS13420 +0.2 0.8 DUF4230 domain-containing protein compare
BBR_RS20635 +0.2 1.3 hypothetical protein compare
BBR_RS13940 +0.2 1.0 integrase compare
BBR_RS18120 +0.2 0.7 hypothetical protein compare
BBR_RS13340 +0.2 1.3 TIGR03943 family protein compare
BBR_RS12435 +0.2 1.8 ABC transporter ATP-binding protein compare
BBR_RS12165 +0.2 1.7 ATP-binding protein compare
BBR_RS15355 +0.2 1.0 DUF3800 domain-containing protein compare
BBR_RS15795 +0.2 0.9 phosphoribosyl-ATP diphosphatase compare
BBR_RS15860 +0.2 0.4 DUF2316 domain-containing protein compare
BBR_RS16290 +0.2 1.6 histidine phosphatase family protein compare
BBR_RS16175 +0.2 0.9 DNA integration/recombination/inversion protein compare
BBR_RS13600 +0.2 1.5 carbohydrate-binding protein compare
BBR_RS14870 +0.2 0.8 histidine phosphatase family protein compare
BBR_RS16150 +0.2 1.3 GuaB3 family IMP dehydrogenase-related protein compare
BBR_RS18530 +0.2 1.3 low molecular weight phosphotyrosine protein phosphatase compare
BBR_RS13125 +0.2 0.5 ABC transporter permease compare
BBR_RS19600 +0.2 1.4 hypothetical protein compare
BBR_RS13785 +0.2 1.4 myristoyl transferase compare
BBR_RS11220 +0.2 1.7 YbhB/YbcL family Raf kinase inhibitor-like protein compare
BBR_RS19055 +0.2 0.6 ferredoxin family protein compare
BBR_RS13110 +0.2 1.3 type III pantothenate kinase compare
BBR_RS11975 +0.2 1.2 hypothetical protein compare
BBR_RS16540 +0.2 1.2 XRE family transcriptional regulator compare
BBR_RS15000 +0.2 1.2 ABC transporter ATP-binding protein compare
BBR_RS19945 +0.2 1.2 MarR family transcriptional regulator compare
BBR_RS13445 +0.2 1.5 phosphoribosylformylglycinamidine synthase compare
BBR_RS14750 +0.2 1.4 serine/threonine protein kinase compare
BBR_RS13860 +0.2 1.4 energy-coupling factor transporter transmembrane protein EcfT compare
BBR_RS16030 +0.2 1.1 hypothetical protein compare
BBR_RS21055 +0.2 0.9 hypothetical protein compare
BBR_RS20755 +0.2 1.0 IS3 family transposase compare
BBR_RS18320 +0.2 1.1 hypothetical protein compare
BBR_RS13145 +0.2 1.3 cystathionine gamma-synthase compare
BBR_RS15030 +0.2 1.0 mRNA interferase PemK compare
BBR_RS15390 +0.2 1.1 phospholipase compare
BBR_RS17935 +0.2 1.6 long-chain fatty acid--CoA ligase compare
BBR_RS15745 +0.2 0.8 hydrolase or phosphatase compare
BBR_RS14345 +0.2 1.2 hypothetical protein compare
BBR_RS12805 +0.2 0.8 hypothetical protein compare
BBR_RS14060 +0.2 1.3 ABC transporter compare
BBR_RS18345 +0.2 1.0 hypothetical protein compare
BBR_RS11625 +0.2 1.3 transposase compare
BBR_RS14850 +0.2 0.5 VOC family protein compare
BBR_RS20805 +0.2 1.0 hypothetical protein compare
BBR_RS17475 +0.2 1.1 cold-shock protein compare
BBR_RS16580 +0.2 1.2 EamA/RhaT family transporter compare
BBR_RS15320 +0.2 0.8 hypothetical protein compare
BBR_RS20600 +0.2 1.4 hypothetical protein compare
BBR_RS18440 +0.2 1.2 hypothetical protein compare
BBR_RS18710 +0.2 1.5 hypothetical protein compare
BBR_RS15295 +0.2 1.0 Cof-type HAD-IIB family hydrolase compare
BBR_RS18595 +0.2 1.5 1,4-dihydroxy-2-naphthoate octaprenyltransferase compare
BBR_RS11295 +0.2 1.2 transcriptional regulator compare
BBR_RS14860 +0.2 1.3 MFS transporter compare
BBR_RS19890 +0.2 1.5 ABC transporter permease compare
BBR_RS15240 +0.2 1.1 LacI family DNA-binding transcriptional regulator compare
BBR_RS13425 +0.2 1.1 hypothetical protein compare
BBR_RS13965 +0.2 1.1 thiazole synthase compare
BBR_RS13605 +0.2 1.4 GGDEF domain-containing protein compare
BBR_RS21035 +0.2 0.8 AMMECR1 domain-containing protein compare
BBR_RS16745 +0.2 1.1 segregation/condensation protein A compare
BBR_RS11145 +0.2 0.6 hypothetical protein compare
BBR_RS11355 +0.2 0.9 hypothetical protein compare
BBR_RS10825 +0.2 1.5 beta-glucosidase compare
BBR_RS16200 +0.2 1.1 zinc ribbon domain-containing protein compare
BBR_RS17265 +0.2 1.3 beta-fructofuranosidase compare
BBR_RS15585 +0.2 1.1 heat-inducible transcriptional repressor HrcA compare
BBR_RS13165 +0.2 1.3 amino acid permease compare
BBR_RS16905 +0.2 0.9 hypothetical protein compare
BBR_RS14770 +0.2 1.1 hypothetical protein compare
BBR_RS13140 +0.2 1.2 cysteine synthase compare
BBR_RS10920 +0.2 1.0 hypothetical protein compare
BBR_RS16305 +0.2 1.1 EamA family transporter compare
BBR_RS17995 +0.2 1.2 citrate synthase compare
BBR_RS21135 +0.2 1.2 hypothetical protein compare
BBR_RS20970 +0.2 0.9 integrase compare
BBR_RS14120 +0.2 1.0 aldo/keto reductase compare
BBR_RS13345 +0.2 1.3 permease compare
BBR_RS16485 +0.2 1.1 DUF4192 domain-containing protein compare
BBR_RS15605 +0.2 0.9 PAC2 family protein compare
BBR_RS12550 +0.2 1.3 sugar transferase compare
BBR_RS10970 +0.2 1.3 pilus assembly protein TadE compare
BBR_RS20590 +0.2 1.1 IS30 family transposase compare
BBR_RS20135 +0.1 1.4 alpha-glucosidase compare
BBR_RS16895 +0.1 1.1 MFS transporter compare
BBR_RS12755 +0.1 1.4 DUF4365 domain-containing protein compare
BBR_RS15100 +0.1 1.3 murein L,D-transpeptidase compare
BBR_RS17980 +0.1 1.1 GNAT family N-acetyltransferase compare
BBR_RS15975 +0.1 1.0 hypothetical protein compare
BBR_RS15020 +0.1 0.5 membrane protein compare
BBR_RS16310 +0.1 0.9 hypothetical protein compare
BBR_RS12630 +0.1 1.3 glycosyltransferase family 1 protein compare
BBR_RS14970 +0.1 0.6 transcriptional regulator compare
BBR_RS14955 +0.1 1.0 hypothetical protein compare
BBR_RS19515 +0.1 1.3 ABC transporter ATP-binding protein compare
BBR_RS19930 +0.1 1.3 FAD:protein FMN transferase compare
BBR_RS17240 +0.1 1.1 hypothetical protein compare
BBR_RS15985 +0.1 1.1 IS30 family transposase compare
BBR_RS11555 +0.1 1.3 AarF/ABC1/UbiB kinase family protein compare
BBR_RS18350 +0.1 1.2 hypothetical protein compare
BBR_RS15360 +0.1 0.5 hypothetical protein compare
BBR_RS14790 +0.1 0.9 phosphorylase compare
BBR_RS13835 +0.1 1.1 FAD-dependent oxidoreductase compare
BBR_RS17355 +0.1 1.2 phosphatase PAP2 family protein compare
BBR_RS16075 +0.1 0.8 hypothetical protein compare
BBR_RS14185 +0.1 1.2 cell division protein FtsK compare
BBR_RS15590 +0.1 1.0 molecular chaperone DnaJ compare
BBR_RS17720 +0.1 1.2 CRISPR-associated helicase/endonuclease Cas3 compare
BBR_RS12155 +0.1 1.1 sugar ABC transporter permease compare
BBR_RS21045 +0.1 0.8 hypothetical protein compare
BBR_RS16505 +0.1 0.8 hypothetical protein compare
BBR_RS14585 +0.1 0.3 hypothetical protein compare
BBR_RS15075 +0.1 0.9 peptidase A24 compare
BBR_RS14055 +0.1 0.8 ABC-2 transporter permease compare
BBR_RS14105 +0.1 1.0 N-acetyltransferase compare
BBR_RS13960 +0.1 0.3 thiamine biosynthesis protein ThiS compare


Specific Phenotypes

None in this experiment

For Bifidobacterium breve UCC2003 in temperature experiments