| | gene | name | fitness | t score | description | |
|---|
| PGA1_c21690 | | +8.2 | 56.9 | transporter, BCCT family | conserved |
| PGA1_c21660 | | +2.5 | 15.9 | choline dehydrogenase BetA | conserved |
| PGA1_c21670 | | +1.9 | 9.0 | betaine aldehyde dehydrogenase BetB | conserved |
| PGA1_c21680 | | +1.8 | 13.1 | choline-sulfatase BetC | compare |
| PGA1_c34150 | | +1.4 | 2.2 | exodeoxyribonuclease VII, small subunit | compare |
| PGA1_c19870 | | +1.3 | 2.2 | hypothetical protein | compare |
| PGA1_262p00980 | | +1.2 | 6.1 | transcriptional regulator, LysR family | compare |
| PGA1_262p00950 | | +1.2 | 4.1 | thioesterase superfamily protein TdaD | compare |
| PGA1_262p00960 | | +1.1 | 11.0 | Prephenate dehydratase. | compare |
| PGA1_c04050 | | +1.1 | 5.6 | phenylacetic acid degradation protein PaaD | compare |
| PGA1_c03330 | | +1.1 | 4.0 | tetratricopeptide repeat-containing protein | compare |
| PGA1_78p00490 | | +1.1 | 1.5 | putative HTH-type transcriptional regulator | compare |
| PGA1_c19200 | | +1.1 | 2.5 | Predicted Fe-S protein | compare |
| PGA1_c11540 | | +1.1 | 1.6 | gamma-glutamylputrescine synthetase PuuA | compare |
| PGA1_c02700 | | +1.0 | 6.4 | putative HTH-type transcriptional regulator | compare |
| PGA1_c15960 | | +1.0 | 7.7 | Predicted ATPase | compare |
| PGA1_65p00450 | | +1.0 | 1.9 | UDP-glucose 6-dehydrogenase Ugd | compare |
| PGA1_c33190 | | +0.9 | 5.5 | putative anti-sigma-B factor antagonist | compare |
| PGA1_c12550 | | +0.9 | 2.6 | hypothetical protein | compare |
| PGA1_262p01410 | | +0.8 | 1.7 | malate/L-lactate dehydrogenase-like protein | compare |
| PGA1_c04040 | | +0.8 | 7.0 | phenylacetic acid degradation NADH oxidoreductase PaaE | compare |
| PGA1_c21700 | | +0.8 | 4.7 | HTH-type transcriptional regulator | compare |
| PGA1_c08600 | | +0.8 | 5.8 | diguanylate cyclase (GGDEF) domain-containing protein | compare |
| PGA1_c03880 | | +0.8 | 6.8 | putative transcriptional activator protein RaiR | compare |
| PGA1_262p01300 | | +0.8 | 1.9 | Cupin domain. | compare |
| PGA1_c18380 | | +0.8 | 1.4 | Phage Head-Tail Attachment. | compare |
| PGA1_c34880 | | +0.8 | 6.0 | putative response regulator | compare |
| PGA1_262p01800 | | +0.8 | 3.0 | putative membrane dipeptidase | compare |
| PGA1_c08780 | | +0.8 | 1.8 | hypothetical protein | compare |
| PGA1_c08590 | | +0.8 | 5.4 | heme NO binding domain-containing protein | compare |
| PGA1_c20140 | | +0.8 | 4.5 | putative arginine-tRNA-protein transferase | compare |
| PGA1_c18560 | | +0.8 | 1.8 | hypothetical protein | compare |
| PGA1_c34890 | | +0.8 | 5.1 | putative histidine-containing phosphotransfer protein | compare |
| PGA1_262p00470 | | +0.8 | 2.1 | Plasmid stabilization system protein | compare |
| PGA1_c35920 | | +0.8 | 1.3 | thiamine kinase ThiK-like protein | compare |
| PGA1_c21900 | | +0.8 | 1.9 | Uncharacterized conserved small protein | compare |
| PGA1_c04080 | | +0.8 | 5.6 | phenylacetic acid degradation protein PaaA | compare |
| PGA1_c07490 | | +0.7 | 1.3 | Putative sterol carrier protein | compare |
| PGA1_c27240 | | +0.7 | 1.6 | hypothetical protein | compare |
| PGA1_c26790 | | +0.7 | 4.2 | transcriptional regulator, TetR family | compare |
| PGA1_c00600 | | +0.7 | 0.9 | putative acetyltransferase | compare |
| PGA1_c04060 | | +0.7 | 4.1 | phenylacetic acid degradation protein PaaC | compare |
| PGA1_65p00070 | | +0.7 | 1.2 | putative regulatory protein, LuxR family | compare |
| PGA1_c00610 | | +0.7 | 1.2 | acetyltransferase, GNAT family | compare |
| PGA1_c34650 | | +0.7 | 1.1 | UPF0090 protein YhbC | compare |
| PGA1_262p02160 | | +0.7 | 3.7 | putative chemotaxis response regulator protein-glutamate methylesterase | compare |
| PGA1_c16120 | | +0.7 | 2.4 | hypothetical protein | compare |
| PGA1_262p00060 | | +0.7 | 1.6 | putative glycosyl transferase | compare |
| PGA1_c27660 | | +0.7 | 1.8 | hypothetical protein | compare |
| PGA1_c05530 | | +0.7 | 2.5 | putative allantoin catabolism protein | compare |
| PGA1_262p01165 | | +0.7 | 1.0 | hypothetical protein | compare |
| PGA1_262p01780 | | +0.7 | 2.0 | transcriptional regulator, LysR family | compare |
| PGA1_c21580 | | +0.6 | 2.4 | hypothetical protein | compare |
| PGA1_c15950 | | +0.6 | 4.3 | putative branched-chain amino acid transport system, permease protein | compare |
| PGA1_262p00420 | | +0.6 | 2.5 | Transcriptional regulator/sugar kinase | compare |
| PGA1_c17030 | | +0.6 | 1.4 | peptidoglycan binding domain-containing protein | compare |
| PGA1_262p00800 | | +0.6 | 4.2 | phenylacetic acid degradation protein PaaZ | compare |
| PGA1_c24800 | | +0.6 | 1.3 | putative bifunctional SAT/APS kinase | compare |
| PGA1_262p00450 | | +0.6 | 1.5 | glucose transporter, ATPase component (from data) | compare |
| PGA1_c01670 | | +0.6 | 1.9 | hypothetical protein | compare |
| PGA1_c15660 | | +0.6 | 3.0 | enoyl-CoA hydratase/isomerase family protein | compare |
| PGA1_c14140 | | +0.6 | 1.4 | hypothetical protein | compare |
| PGA1_c13540 | | +0.6 | 4.0 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_262p00340 | | +0.6 | 1.8 | oligopeptide ABC transporter, ATP binding protein | compare |
| PGA1_c29040 | | +0.6 | 3.0 | endonuclease III | compare |
| PGA1_78p00240 | | +0.6 | 1.3 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_262p02170 | | +0.6 | 1.3 | putative chemoreceptor glutamine deamidase CheD | compare |
| PGA1_c04090 | | +0.6 | 3.7 | beta-ketoadipyl-CoA thiolase PaaJ | compare |
| PGA1_262p01060 | | +0.6 | 1.3 | Protein of unknown function (DUF995). | compare |
| PGA1_c24750 | | +0.6 | 2.2 | uncharacterized protein, YfiH family | compare |
| PGA1_c02460 | | +0.6 | 5.0 | hypothetical protein | compare |
| PGA1_c31270 | | +0.6 | 5.4 | putative glycosyltransferase / polysaccharide deacetylase | compare |
| PGA1_c20480 | | +0.6 | 1.8 | tRNA-Val | compare |
| PGA1_c31260 | | +0.6 | 5.3 | Protein of unknown function (DUF3131). | compare |
| PGA1_262p00710 | | +0.6 | 1.1 | serine/threonine-protein kinase RsbT-like protein | compare |
| PGA1_c26560 | | +0.6 | 2.7 | Predicted dioxygenase of extradiol dioxygenase family | compare |
| PGA1_c04490 | | +0.6 | 5.2 | indolepyruvate oxidoreductase | compare |
| PGA1_262p00910 | | +0.6 | 1.5 | putative cation transort protein | compare |
| PGA1_c17050 | | +0.5 | 1.3 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC | compare |
| PGA1_c04340 | | +0.5 | 2.3 | hypothetical protein | compare |
| PGA1_262p01710 | | +0.5 | 1.6 | putative glutathione transport system permease protein | compare |
| PGA1_c18630 | | +0.5 | 1.4 | hypothetical protein | compare |
| PGA1_c05730 | | +0.5 | 1.9 | putative methylated-DNA--protein-cysteine methyltransferase | compare |
| PGA1_c15940 | | +0.5 | 3.7 | putative branched-chain amino acid transport system, permease protein | compare |
| PGA1_c02450 | | +0.5 | 4.0 | putative outer membrane efflux protein | compare |
| PGA1_262p01730 | | +0.5 | 1.9 | putative glutathione import ATP-binding protein | compare |
| PGA1_c06330 | | +0.5 | 2.4 | putative ribosomal-protein-alanine acetyltransferase | compare |
| PGA1_c14700 | | +0.5 | 2.0 | hypothetical protein | compare |
| PGA1_c18370 | | +0.5 | 2.7 | hypothetical protein | compare |
| PGA1_262p01110 | | +0.5 | 1.4 | hypothetical protein | compare |
| PGA1_c11710 | | +0.5 | 2.3 | transcriptional regulator, LysR family | compare |
| PGA1_c11380 | | +0.5 | 2.8 | endonuclease-like protein | compare |
| PGA1_c04070 | | +0.5 | 2.9 | phenylacetic acid degradation protein PaaB | compare |
| PGA1_262p00870 | | +0.5 | 1.9 | ABC transporter, extracellular solute-binding protein | compare |
| PGA1_c26630 | | +0.5 | 2.3 | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut | compare |
| PGA1_c12160 | | +0.5 | 2.1 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_c04310 | | +0.5 | 1.1 | Protein of unknown function (DUF1045). | compare |
| PGA1_c10210 | | +0.5 | 1.5 | hypothetical protein | compare |
| PGA1_262p02070 | | +0.5 | 0.6 | hypothetical protein | compare |
| PGA1_c16010 | | +0.5 | 2.9 | putative L,D-transpeptidase | compare |
| PGA1_c26950 | | +0.5 | 1.6 | putative exopolysaccharide synthesis protein ExoD | compare |
| PGA1_c19340 | | +0.5 | 2.2 | aldehyde dehydrogenase-like protein | compare |
| PGA1_c29900 | | +0.5 | 0.8 | protein slyX-like protein | compare |
| PGA1_c01960 | | +0.5 | 1.6 | putative hydrolase | compare |
| PGA1_c14130 | | +0.5 | 1.9 | transglycolase-like protein | compare |
| PGA1_c09580 | | +0.5 | 1.2 | antibiotic biosynthesis monooxygenase-like protein | compare |
| PGA1_c14420 | | +0.5 | 1.9 | Methyltransferase domain. | compare |
| PGA1_c27130 | | +0.5 | 2.7 | putative HTH-type transcriptional regulator | compare |
| PGA1_c14070 | | +0.5 | 2.4 | hypothetical protein | compare |
| PGA1_262p01390 | | +0.5 | 1.2 | hypothetical protein | compare |
| PGA1_c22840 | | +0.5 | 2.1 | putative type IV secretory pathway virB3 protein | compare |
| PGA1_c23710 | | +0.5 | 1.6 | putative protein HflK | compare |
| PGA1_78p00060 | | +0.5 | 0.7 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_c08890 | | +0.5 | 2.2 | putative capsule polysaccharide export outer membrane protein | compare |
| PGA1_c34770 | | +0.5 | 2.6 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_c35560 | | +0.5 | 2.9 | chemotaxis protein MotB-like protein | compare |
| PGA1_262p01270 | | +0.5 | 1.1 | Uncharacterized conserved protein | compare |
| PGA1_c31170 | | +0.5 | 1.3 | phosphotyrosine protein phosphatase-like protein | compare |
| PGA1_c02020 | | +0.5 | 1.5 | Predicted metal-binding protein | compare |
| PGA1_c34440 | | +0.5 | 2.3 | putrescine transport system permease protein PotH | compare |
| PGA1_c19780 | | +0.5 | 1.8 | clan AA aspartic protease, TIGR02281 family | compare |
| PGA1_c26480 | | +0.5 | 2.1 | Protein involved in catabolism of external DNA | compare |
| PGA1_c02430 | | +0.5 | 3.0 | type I secretion membrane fusion protein, HlyD family | compare |
| PGA1_c34480 | | +0.5 | 1.0 | UTP--glucose-1-phosphate uridylyltransferase CelA | compare |
| PGA1_c16190 | | +0.4 | 1.1 | hypothetical protein | compare |
| PGA1_c27900 | | +0.4 | 1.4 | ligand-binding UTRA domain-containing protein | compare |
| PGA1_c27220 | | +0.4 | 2.5 | putative gamma-butyrobetaine dioxygenase | compare |
| PGA1_c30000 | | +0.4 | 1.2 | ATP-dependent Clp protease adaptor protein ClpS | compare |
| PGA1_c16610 | | +0.4 | 2.8 | putative transcriptional regulator, AsnC family | compare |
| PGA1_c08900 | | +0.4 | 2.8 | putative capsule polysaccharide export protein KpsS | compare |
| PGA1_c04370 | | +0.4 | 2.3 | putative glycosyltransferase protein | compare |
| PGA1_c04900 | | +0.4 | 1.4 | peptidyl-tRNA hydrolase Pth | compare |
| PGA1_c12940 | | +0.4 | 1.6 | adenylate kinase Adk | compare |
| PGA1_262p01400 | | +0.4 | 2.0 | dimethylglycine dehydrogenase DmgdH | compare |
| PGA1_c22900 | | +0.4 | 1.7 | putative type IV secretion system protein VirB9 | compare |
| PGA1_c18510 | | +0.4 | 2.0 | Protein of unknown function (DUF1064). | compare |
| PGA1_c22370 | | +0.4 | 2.0 | hypothetical protein | compare |
| PGA1_c08300 | | +0.4 | 2.0 | hypothetical protein | compare |
| PGA1_c23700 | | +0.4 | 0.9 | protein HflC | compare |
| PGA1_262p00660 | | +0.4 | 1.0 | Predicted periplasmic protein | compare |
| PGA1_c33870 | | +0.4 | 2.5 | putative HTH-type transcriptional regulator GntR | compare |
| PGA1_c12780 | | +0.4 | 1.0 | hypothetical protein | compare |
| PGA1_c04380 | | +0.4 | 3.0 | putative colanic acid biosynthesis glycosyltransferase WcaL | compare |
| PGA1_c20290 | | +0.4 | 2.2 | putative N-acetylmuramoyl-L-alanine amidase AmiC | compare |
| PGA1_c27000 | | +0.4 | 1.4 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_c34590 | | +0.4 | 2.0 | putative peptidylprolyl isomerase | compare |
| PGA1_c06230 | | +0.4 | 2.2 | putative protein Smf | compare |
| PGA1_c07800 | | +0.4 | 2.7 | putative transcriptional regulator, lacI family | compare |
| PGA1_c30390 | | +0.4 | 2.2 | putative polyphosphate kinase | compare |
| PGA1_c27760 | | +0.4 | 1.7 | ABC transporter ATP-binding protein | compare |
| PGA1_c06590 | | +0.4 | 0.9 | putative transcriptional regulator, AsnC family | compare |
| PGA1_c19690 | | +0.4 | 1.4 | Protein of unknown function (DUF2892). | compare |
| PGA1_c33230 | | +0.4 | 2.3 | thioredoxin-like protein | compare |
| PGA1_c01790 | | +0.4 | 1.5 | hypothetical protein | compare |
| PGA1_c29160 | | +0.4 | 2.4 | HTH-type transcriptional regulator, LysR family | compare |
| PGA1_c05490 | | +0.4 | 1.5 | ureidoglycolate hydrolase AllA | compare |
| PGA1_262p00490 | | +0.4 | 1.1 | hypothetical protein | compare |
| PGA1_c22500 | | +0.4 | 1.2 | hypothetical protein | compare |
| PGA1_c36350 | | +0.4 | 2.4 | Imidazolonepropionase (EC 3.5.2.7) (from data) | compare |
| PGA1_c35410 | | +0.4 | 1.6 | hypothetical protein | compare |
| PGA1_65p00380 | | +0.4 | 0.9 | hypothetical protein | compare |
| PGA1_c15620 | | +0.4 | 1.6 | Dioxygenases related to 2-nitropropane dioxygenase | compare |
| PGA1_c15280 | | +0.4 | 1.2 | Uncharacterized conserved protein | compare |
| PGA1_c32540 | | +0.4 | 2.8 | putative Fe(3+)-transport system protein SfuB | compare |
| PGA1_c21990 | | +0.4 | 1.7 | putative metal-dependent hydrolase | compare |
| PGA1_c10020 | | +0.4 | 1.7 | Putative protein-S-isoprenylcysteine methyltransferase | compare |
| PGA1_c20590 | | +0.4 | 1.3 | hypothetical protein | compare |
| PGA1_c13080 | | +0.4 | 1.2 | transcriptional regulator, GntR family | compare |
| PGA1_c02440 | | +0.4 | 2.9 | putative ATP-binding/permease fusion ABC transporter | compare |
| PGA1_262p00920 | | +0.4 | 1.0 | Membrane proteins related to metalloendopeptidases | compare |
| PGA1_c16430 | | +0.4 | 1.6 | putative DNA repair protein | compare |
| PGA1_c21710 | | +0.4 | 1.8 | Predicted integral membrane protein | compare |
| PGA1_c24540 | | +0.4 | 1.3 | putative aminotransferase, class IV | compare |
| PGA1_c12150 | | +0.4 | 2.4 | dihydroorotate dehydrogenase PyrD | compare |
| PGA1_c14820 | | +0.4 | 1.9 | hypothetical protein | compare |
| PGA1_c27850 | | +0.4 | 2.0 | glycosyltransferase | compare |
| PGA1_c03020 | | +0.4 | 2.2 | dihydroorotase PyrC | compare |
| PGA1_c33660 | | +0.4 | 1.6 | hypothetical protein | compare |
| PGA1_262p00320 | | +0.4 | 1.3 | ABC transporter, inner membrane component | compare |
| PGA1_c06630 | | +0.4 | 1.0 | hypothetical protein | compare |
| PGA1_c29440 | | +0.4 | 2.0 | hypothetical protein | compare |
| PGA1_c12100 | | +0.4 | 1.3 | transcriptional regulator , MerR family | compare |
| PGA1_c33920 | | +0.4 | 1.6 | TRAP transporter, subunit DctP | compare |
| PGA1_c05190 | | +0.4 | 2.1 | ABC transporter, inner membrane component | compare |
| PGA1_c07350 | | +0.4 | 1.4 | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase DgoA | compare |
| PGA1_c15060 | | +0.4 | 1.7 | carbohydrate kinase, PfkB family | compare |
| PGA1_c32010 | | +0.4 | 1.8 | isopentenyl-diphosphate delta-isomerase Idi | compare |
| PGA1_c22910 | | +0.4 | 2.2 | putative type IV secretion system protein VirB10 | compare |
| PGA1_c08960 | | +0.4 | 1.9 | DNA repair endonuclease mmcB (DUF1052) (from data) | compare |
| PGA1_c10910 | | +0.4 | 1.6 | dihydroorotase PyrC | compare |
| PGA1_c04470 | | +0.4 | 2.5 | putative glutathione S-transferase | compare |
| PGA1_c25820 | | +0.4 | 1.6 | putative acetyltransferase, GNAT family | compare |
| PGA1_c08680 | | +0.4 | 1.8 | pirin-like protein | compare |
| PGA1_c09590 | | +0.4 | 2.2 | uncharacterized protein YhiN | compare |
| PGA1_c36400 | | +0.4 | 1.9 | hypothetical protein | compare |
| PGA1_c15870 | | +0.4 | 2.1 | transcriptional regulator, AraC family | compare |
| PGA1_c35220 | | +0.4 | 2.2 | Uncharacterized protein conserved in bacteria | compare |
| PGA1_c21040 | | +0.4 | 1.1 | hypothetical protein | compare |
| PGA1_c00550 | | +0.4 | 1.8 | putative cob(II)yrinic acid a,c-diamide reductase | compare |
| PGA1_c08755 | | +0.4 | 1.7 | sarcosine oxidase subunit delta | compare |