Experiment set6IT002 for Sinorhizobium meliloti 1021

Compare to:

Day1 TSB

200 most important genes:

  gene name fitness t score description  
SMc02245 -3.8 -5.4 dihydroorotate dehydrogenase 2 compare
SMc00412 -3.2 -3.0 orotidine 5'-phosphate decarboxylase compare
SMc02246 -2.8 -0.7 hypothetical protein compare
SMc02166 -2.0 -5.9 dihydroorotase compare
SMc02165 -1.9 -6.2 orotate phosphoribosyltransferase compare
SMc01360 -1.6 -1.0 aspartate carbamoyltransferase catalytic subunit compare
SMc00494 -1.6 -2.9 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00450 -1.6 -2.5 protoheme IX farnesyltransferase compare
SMc00493 -1.5 -7.9 phosphoribosylformylglycinamidine synthase I compare
SMc00488 -1.4 -11.8 phosphoribosylformylglycinamidine synthase II compare
SMc00010 -1.4 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00554 -1.4 -8.8 amidophosphoribosyltransferase compare
SMc00963 -1.3 -2.7 hypothetical protein compare
SMc01361 -1.3 -1.6 dihydroorotase compare
SMc01881 -1.2 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
SMc00993 -1.1 -6.2 phosphoribosylamine--glycine ligase compare
SMc00495 -1.1 -2.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00614 -1.0 -5.1 phosphoribosylglycinamide formyltransferase compare
SM_b20948 -1.0 -1.2 glucosyltransferase compare
SMc00615 -1.0 -6.0 phosphoribosylaminoimidazole synthetase compare
SMc02362 -1.0 -2.3 cytochrome c-type biogenesis protein CcmE compare
SMc04088 -1.0 -7.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01183 -1.0 -1.6 LexA repressor compare
SMc00566 -1.0 -2.6 hypothetical protein compare
SMc02897 -1.0 -2.1 cytochrome C transmembrane protein compare
SMc01471 -1.0 -2.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMc00073 -0.9 -2.3 hypothetical protein compare
SMc00012 -0.9 -1.6 cytochrome C oxidase assembly protein compare
SMc00815 -0.9 -0.8 inosine 5'-monophosphate dehydrogenase compare
SMc01242 -0.8 -2.2 signal peptide protein compare
SMc02858 -0.8 -0.9 chaperone protein DnaJ compare
SMc04001 -0.8 -1.1 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b21174 -0.8 -2.0 phosphate uptake ABC transporter permease compare
SMc02407 -0.8 -4.6 hypothetical protein compare
SMc00726 -0.8 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc03850 -0.8 -0.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00188 -0.8 -5.3 cytochrome B transmembrane protein compare
SMa1924 -0.7 -1.1 hypothetical protein compare
SM_b21175 -0.7 -0.9 phosphate uptake ABC transporter permease compare
SMa1413 -0.7 -1.2 hypothetical protein compare
SMa1630 -0.7 -2.1 hypothetical protein compare
SMc04002 -0.7 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02755 -0.7 -2.8 S-adenosyl-L-homocysteine hydrolase compare
SMc01441 -0.7 -4.4 membrane bound protease compare
SMc02058 -0.7 -2.4 YAJC protein compare
SMc00239 -0.7 -1.2 hypothetical protein compare
SMc02856 -0.7 -4.6 penicillin-binding protein compare
SMc00709 -0.6 -3.2 hypothetical protein compare
SMc00286 -0.6 -2.1 hemolysin-type calcium-binding protein compare
SMc02112 -0.6 -2.9 hypothetical protein compare
SMa1053 -0.6 -1.8 hypothetical protein compare
SMc03763 -0.6 -0.4 cytosine-specific methyltransferase compare
SMc00404 -0.6 -1.1 hypothetical protein compare
SMc01147 -0.6 -2.0 coproporphyrinogen III oxidase compare
SMc04454 -0.6 -3.6 ABC transporter ATP-binding protein compare
SMc00187 -0.6 -1.3 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00085 -0.6 -3.2 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMa2034 -0.6 -1.2 hypothetical protein compare
SMc02868 -0.5 -3.0 multidrug efflux system protein compare
SMa0645 -0.5 -1.3 hypothetical protein compare
SMc04383 -0.5 -1.9 putative hydrolase, required for lysine catabolism (from data) compare
SMc00053 -0.5 -0.8 monovalent cation/H+ antiporter subunit C compare
SMc02867 -0.5 -2.6 multidrug-efflux system transmembrane protein compare
SMc02505 -0.5 -0.7 hypothetical protein compare
SMc02173 -0.5 -1.9 hypothetical protein compare
SMc04224 -0.5 -1.1 hypothetical protein compare
SM_b21170 -0.5 -3.5 guanylate kinase compare
SMc00013 -0.5 -1.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc01007 -0.5 -0.8 hypothetical protein compare
SMc03016 -0.5 -4.2 transcriptional regulator compare
SMc03780 -0.5 -1.9 hypothetical protein compare
SMc03773 -0.5 -3.4 hypothetical protein compare
SMc00513 -0.5 -3.5 amino acid-binding periplasmic protein compare
SMc02425 -0.5 -2.3 transcriptional regulator compare
SMc04175 -0.5 -3.6 transmembrane protein compare
SMa1840 -0.5 -2.1 hypothetical protein compare
SMc01440 -0.5 -3.1 hydrolase serine protease transmembrane protein compare
SMc00009 -0.5 -2.8 cytochrome C oxidase subunit II protein compare
SMc01454 -0.5 -3.9 hypothetical protein compare
SMc03052 -0.5 -2.9 flagellar basal body rod modification protein compare
SMa1002 -0.5 -1.3 hypothetical protein compare
SMc04298 -0.5 -1.2 hypothetical protein compare
SMc00496 -0.5 -1.1 hypothetical protein compare
SMc03941 -0.5 -1.5 hypothetical protein compare
SMc01768 -0.5 -1.5 transcriptional regulator compare
SMc03051 -0.4 -2.6 flagellar biosynthesis repressor FlbT compare
SMc03839 -0.4 -0.8 hypothetical protein compare
SMc02095 -0.4 -3.8 hypothetical protein compare
SMc01800 -0.4 -0.5 cytochrome C oxidase assembly transmembrane protein compare
SMc04391 -0.4 -1.3 3-ketoacyl-ACP reductase compare
SMc03111 -0.4 -3.2 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SMc01366 -0.4 -2.0 hypothetical protein compare
SMa1765 -0.4 -1.0 hypothetical protein compare
SM_b20882 -0.4 -1.9 hypothetical protein compare
SMc01207 -0.4 -0.5 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00150 -0.4 -4.2 hypothetical protein compare
SMc02050 -0.4 -1.3 trigger factor compare
SMc03844 -0.4 -1.6 hypothetical protein compare
SM_b20145 -0.4 -1.8 hypothetical protein compare
SMa1639 -0.4 -0.8 hypothetical protein compare
SM_b21397 -0.4 -2.0 hypothetical protein compare
SMa1174 -0.4 -0.9 hypothetical protein compare
SMc00006 -0.4 -1.6 hypothetical protein compare
SMc01850 -0.4 -1.9 hypothetical protein compare
SMc01931 -0.4 -2.2 hypothetical protein compare
SMc02713 -0.4 -1.2 RNA polymerase sigma-E factor (sigma-24) protein compare
SMa2011 -0.4 -1.9 hypothetical protein compare
SMc02884 -0.4 -3.5 lipoprotein compare
SMc01595 -0.4 -1.2 sensor histidine kinase transmembrane protein compare
SM_b20509 -0.4 -1.7 transcriptional regulator compare
SMc03182 -0.4 -2.4 pH adaptation potassium efflux system E transmembrane protein compare
SMc02049 -0.4 -3.7 glycine dehydrogenase compare
SMc00458 -0.4 -3.7 transcriptional regulator compare
SMc00689 -0.4 -2.5 lipoprotein compare
SMc02846 -0.4 -2.4 sugar kinase compare
SMc00451 -0.4 -3.1 processing protease compare
SMa1239 -0.4 -1.0 NapD component of periplasmic nitrate reductase compare
SMc03236 -0.4 -1.8 glutamine amidotransferase compare
SM_b21669 -0.4 -1.7 hypothetical protein compare
SMc05009 -0.4 -1.4 nodulation protein NolR compare
SM_b21347 -0.4 -1.4 pectin degradation protein compare
SMc01223 -0.4 -1.8 transcriptional regulator compare
SM_b20701 -0.4 -0.9 hypothetical protein compare
SMc04233 -0.4 -1.4 hypothetical protein compare
SMc02985 -0.4 -3.3 hypothetical protein compare
SMc00360 -0.4 -2.1 hypothetical protein compare
SMc03175 -0.4 -2.5 nucleoside hydrolase compare
SMa2151 -0.4 -2.3 DNA-binding protein compare
SMa1017 -0.4 -1.4 hypothetical protein compare
SMc04200 -0.4 -2.5 signal peptide protein compare
SMc03046 -0.4 -2.1 transcriptional regulator compare
SMc03048 -0.4 -3.2 flagellar hook-associated protein FlgK compare
SMc00949 -0.4 -1.4 hypothetical protein compare
SMc01099 -0.4 -1.6 tRNA pseudouridine synthase A compare
SMa0834 -0.4 -2.5 FdxB ferredoxin III compare
SMc02313 -0.4 -0.7 hypothetical protein compare
SMc03746 -0.4 -1.1 hypothetical protein compare
SMc04126 -0.4 -3.1 ABC transporter permease compare
SMc02084 -0.4 -0.7 biopolymer transport transmembrane protein compare
SMc03072 -0.4 -1.2 hypothetical protein compare
SMc02510 -0.4 -0.5 ferric uptake regulation protein compare
SMc00072 -0.4 -1.0 peroxiredoxin protein compare
SMc02904 -0.4 -1.2 hypothetical protein compare
SMc04174 -0.4 -0.8 signal peptide protein compare
SM_b20177 -0.4 -2.5 hypothetical protein compare
SMc01782 -0.4 -2.0 hypothetical protein compare
SM_b21040 -0.4 -2.3 oligopeptidemurein peptide ABC transporter ATP-binding protein compare
SMc02373 -0.4 -0.9 hypothetical protein compare
SMc04866 -0.4 -2.0 hypothetical protein compare
SMc00650 -0.3 -1.1 hypothetical protein compare
SMc03993 -0.3 -2.5 hypothetical protein compare
SM_b21482 -0.3 -1.4 hypothetical protein compare
SMa1660 -0.3 -2.6 hypothetical protein compare
SMc03053 -0.3 -1.2 flagellar biosynthesis protein FliQ compare
SMa0325 -0.3 -1.8 hypothetical protein compare
SMc00576 -0.3 -1.9 hypothetical protein compare
SMc00948 -0.3 -2.9 glutamine synthetase compare
SMa2299 -0.3 -1.0 hypothetical protein compare
SMa1853 -0.3 -2.1 hypothetical protein compare
SMc00514 -0.3 -1.3 monooxygenase compare
SMa0824 -0.3 -2.2 hypothetical protein compare
SM_b20451 -0.3 -1.4 hypothetical protein compare
SMc01342 -0.3 -2.1 hypothetical protein compare
SMc03027 -0.3 -1.5 flagellar basal body rod protein FlgB compare
SMc04220 -0.3 -0.8 transcriptional regulator compare
SMc03024 -0.3 -2.6 flagellar basal body rod protein FlgF compare
SMa0199 -0.3 -1.8 ABC transporter ATP-binding protein compare
SMa1176 -0.3 -1.2 hypothetical protein compare
SMc03802 -0.3 -2.5 hypothetical protein compare
SMc02631 -0.3 -1.0 hypothetical protein compare
SM_b20236 -0.3 -1.6 hypothetical protein compare
SM_b20597 -0.3 -1.6 hypothetical protein compare
SMc02564 -0.3 -1.3 LysM domain/BON superfamily protein compare
SMc03012 -0.3 -1.3 chemoreceptor glutamine deamidase CheD compare
SM_b20370 -0.3 -1.5 ATP-binding transport protein compare
SMa0809 -0.3 -2.4 hypothetical protein compare
SMc01259 -0.3 -1.5 hypothetical protein compare
SM_b21399 -0.3 -1.8 hypothetical protein compare
SMc00166 -0.3 -1.0 oxidoreductase NAD protein compare
SMc00727 -0.3 -1.9 3-hydroxybutyryl-CoA dehydrogenase compare
SMc01651 -0.3 -1.0 transcriptional regulator compare
SM_b20258 -0.3 -1.8 transcriptional regulator compare
SMc03180 -0.3 -2.4 monovalent cation/H+ antiporter subunit C compare
SMa5036 -0.3 -2.0 hypothetical protein compare
SMa1149 -0.3 -1.5 hypothetical protein compare
SMc03021 -0.3 -2.5 flagellar motor switch transmembrane protein compare
SMc00854 -0.3 -0.9 hypothetical protein compare
SMc04230 -0.3 -1.3 transmembrane signal peptide protein compare
SMc03055 -0.3 -2.8 flagellar biosynthesis protein FliR compare
SMc03785 -0.3 -1.9 dinucleoside polyphosphate hydrolase compare
SM_b20904 -0.3 -0.8 sugar uptake ABC transporter ATP-binding protein compare
SMc03984 -0.3 -1.4 hypothetical protein compare
SM_b20374 -0.3 -0.9 substrate-binding protein compare
SMc03025 -0.3 -1.9 flagellum-specific ATP synthase compare
SM_b20347 -0.3 -1.8 transcriptional regulator compare
SMc03826 -0.3 -0.3 argininosuccinate synthase compare
SM_b21213 -0.3 -1.2 serinethreonine protein phosphatase compare
SMc05011 -0.3 -1.4 bacteriophage DNA-binding transcription regulator compare
SMc00719 -0.3 -1.5 hypoxanthine-guanine phosphoribosyltransferase compare
SMa1325 -0.3 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in tsb experiments