Experiment set6H44 for Pseudomonas stutzeri RCH2

Compare to:

RCH2 defined media with Sodium Chloride 400 mM

200 most important genes:

  gene name fitness t score description  
Psest_0952 -5.5 -3.8 Uncharacterized conserved protein compare
Psest_0508 -5.5 -6.6 gamma-glutamyl phosphate reductase compare
Psest_3648 -5.4 -7.4 anthranilate phosphoribosyltransferase compare
Psest_0153 -5.1 -10.4 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
Psest_2590 -5.1 -1.7 3-isopropylmalate dehydratase, small subunit compare
Psest_3298 -4.8 -8.0 histidinol dehydrogenase compare
Psest_0155 -4.8 -4.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Psest_3226 -4.8 -1.6 Predicted membrane protein compare
Psest_1115 -4.8 -5.0 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_3384 -4.7 -7.8 glutamate 5-kinase compare
Psest_2584 -4.5 -7.5 Phosphoribosylanthranilate isomerase compare
Psest_2579 -4.5 -7.4 amidophosphoribosyltransferase compare
Psest_1509 -4.4 -12.0 quinolinate synthetase complex, A subunit compare
Psest_3866 -4.4 -15.3 threonine ammonia-lyase, biosynthetic, long form compare
Psest_0152 -4.4 -6.0 Imidazoleglycerol-phosphate dehydratase compare
Psest_3650 -4.4 -13.9 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_3377 -4.3 -1.5 FKBP-type peptidyl-prolyl cis-trans isomerases 2 compare
Psest_0414 -4.3 -5.1 biotin biosynthesis protein BioC compare
Psest_2578 -4.3 -14.3 O-succinylhomoserine sulfhydrylase compare
Psest_3864 -4.3 -13.3 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
Psest_0062 -4.2 -7.6 tryptophan synthase, alpha subunit compare
Psest_4085 -4.2 -17.4 Biotin carboxylase compare
Psest_0280 -4.2 -14.4 homoserine O-acetyltransferase compare
Psest_0279 -4.2 -6.9 methionine biosynthesis protein MetW compare
Psest_3649 -4.2 -10.4 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_0411 -4.1 -10.2 biotin synthetase compare
Psest_4086 -4.1 -12.9 Transcriptional regulator compare
Psest_3419 -4.1 -11.0 Predicted transcriptional regulators compare
Psest_3113 -4.0 -4.1 electron transport complex, RnfABCDGE type, B subunit compare
Psest_0325 -4.0 -18.3 Putative threonine efflux protein compare
Psest_0719 -4.0 -9.4 Uncharacterized protein conserved in bacteria compare
Psest_3944 -4.0 -2.7 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_3299 -3.9 -12.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Psest_0954 -3.9 -8.4 Fe-S oxidoreductase compare
Psest_3647 -3.9 -8.4 Indole-3-glycerol phosphate synthase compare
Psest_0687 -3.8 -9.8 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_0412 -3.8 -10.8 8-amino-7-oxononanoate synthase compare
Psest_2589 -3.8 -12.7 3-isopropylmalate dehydrogenase compare
Psest_0953 -3.7 -10.1 iron-sulfur cluster-binding protein compare
Psest_0415 -3.7 -6.1 dethiobiotin synthase compare
Psest_4084 -3.7 -16.4 oxaloacetate decarboxylase alpha subunit compare
Psest_0306 -3.6 -18.6 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Psest_3159 -3.6 -10.4 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_1452 -3.5 -5.3 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase compare
Psest_0413 -3.4 -9.6 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_1474 -3.3 -4.6 phosphoribosylaminoimidazole synthetase compare
Psest_1492 -3.3 -12.9 DNA-binding ferritin-like protein (oxidative damage protectant) compare
Psest_0718 -3.3 -5.2 nicotinate-nucleotide pyrophosphorylase compare
Psest_2862 -3.3 -13.1 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_0267 -3.3 -11.9 Uncharacterized enzyme of thiazole biosynthesis compare
Psest_0266 -3.3 -8.5 thiamine biosynthesis protein ThiS compare
Psest_2591 -3.3 -3.3 3-isopropylmalate dehydratase, large subunit compare
Psest_0349 -3.3 -11.7 DNA polymerase III, alpha subunit (gram-positive type) compare
Psest_3565 -3.2 -1.8 hypothetical protein compare
Psest_1527 -3.2 -12.5 Na+/proline symporter compare
Psest_0063 -3.2 -7.6 tryptophan synthase, beta subunit compare
Psest_1772 -3.2 -6.3 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3670 -3.1 -14.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_0442 -3.1 -7.6 ATPases of the AAA+ class compare
Psest_3927 -3.1 -6.4 thiazole biosynthesis/tRNA modification protein ThiI compare
Psest_2329 -3.0 -15.1 Transcriptional regulator compare
Psest_0489 -3.0 -2.0 phosphoserine phosphatase SerB compare
Psest_0313 -2.9 -4.9 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_2850 -2.9 -2.0 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_1013 -2.9 -4.8 phosphoribosylamine--glycine ligase compare
Psest_2863 -2.9 -7.6 Transcriptional regulator compare
Psest_0722 -2.9 -9.3 Predicted ATPase compare
Psest_1473 -2.8 -9.9 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_3710 -2.8 -17.1 glutamate synthase small subunit family protein, proteobacterial compare
Psest_2846 -2.8 -4.9 monovalent cation/proton antiporter, MnhG/PhaG subunit compare
Psest_2899 -2.8 -2.2 hypothetical protein compare
Psest_3338 -2.8 -2.6 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_4219 -2.7 -1.9 DNA polymerase I compare
Psest_1640 -2.7 -13.3 (p)ppGpp synthetase, RelA/SpoT family compare
Psest_1700 -2.7 -4.7 Transcriptional regulator compare
Psest_2864 -2.6 -3.9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_3810 -2.6 -2.5 orotate phosphoribosyltransferase compare
Psest_1947 -2.6 -1.8 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_1037 -2.6 -3.7 acetolactate synthase, small subunit compare
Psest_1235 -2.6 -8.5 Leucyl aminopeptidase compare
Psest_0477 -2.5 -12.7 thiamine biosynthesis protein ThiC compare
Psest_1557 -2.5 -6.8 Phosphoenolpyruvate carboxylase compare
Psest_3711 -2.4 -15.3 Glutamate synthase domain 2 compare
Psest_3531 -2.4 -1.9 Peptidase propeptide and YPEB domain. compare
Psest_3297 -2.4 -9.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Psest_0359 -2.4 -2.8 Transcriptional regulators compare
Psest_2848 -2.3 -3.6 Multisubunit Na+/H+ antiporter, MnhE subunit compare
Psest_3178 -2.3 -5.0 formyltetrahydrofolate deformylase compare
Psest_2849 -2.3 -9.0 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit compare
Psest_3031 -2.3 -1.3 hypothetical protein compare
Psest_1366 -2.3 -1.9 hypothetical protein compare
Psest_3400 -2.2 -1.9 Copper resistance protein D. compare
Psest_3745 -2.2 -3.3 Uncharacterized enzyme of heme biosynthesis compare
Psest_3795 -2.2 -9.2 Glycine/D-amino acid oxidases (deaminating) compare
Psest_2123 -2.2 -2.3 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) compare
Psest_0956 -2.2 -10.6 Transcriptional regulators compare
Psest_2851 -2.1 -12.2 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit compare
Psest_3092 -2.1 -2.5 ribonuclease III, bacterial compare
Psest_0537 -2.1 -1.9 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_2714 -2.1 -3.1 7-cyano-7-deazaguanine reductase compare
Psest_1920 -2.1 -1.5 Uncharacterized protein conserved in bacteria compare
Psest_0346 -2.1 -3.6 small component of pyruvate/D-alanine transporter (TIGR03647) (from data) compare
Psest_2110 -2.1 -4.2 hypothetical protein compare
Psest_0955 -2.1 -4.5 D,L-lactate:H+ symporter (from data) compare
Psest_3721 -2.1 -7.6 Malic enzyme compare
Psest_3128 -2.1 -6.6 Protein-disulfide isomerase compare
Psest_3129 -2.1 -1.9 tyrosine recombinase XerD compare
Psest_3850 -2.1 -1.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_2316 -2.1 -12.5 phosphoenolpyruvate synthase compare
Psest_1012 -2.0 -6.0 Signal transduction histidine kinase compare
Psest_3399 -2.0 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_4099 -2.0 -11.8 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component compare
Psest_3123 -2.0 -4.1 dihydroorotase, homodimeric type compare
Psest_1295 -2.0 -8.4 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3196 -2.0 -6.9 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes compare
Psest_0498 -2.0 -1.3 ribosome small subunit-dependent GTPase A compare
Psest_0326 -1.9 -7.3 Taurine catabolism dioxygenase TauD, TfdA family. compare
Psest_1476 -1.9 -8.7 Predicted permease compare
Psest_1804 -1.9 -3.1 Superfamily II DNA and RNA helicases compare
Psest_0181 -1.9 -6.5 glycine cleavage system T protein compare
Psest_3998 -1.9 -5.1 glutamate--cysteine ligase compare
Psest_1103 -1.8 -4.6 GTP-binding protein YchF compare
Psest_3973 -1.8 -1.7 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_1242 -1.8 -3.9 tRNA-guanine transglycosylase, queuosine-34-forming compare
Psest_1704 -1.8 -3.0 Dehydrogenases (flavoproteins) compare
Psest_3828 -1.7 -0.8 zinc-binding alcohol dehydrogenase family protein compare
Psest_2847 -1.7 -3.0 Multisubunit Na+/H+ antiporter, MnhF subunit compare
Psest_2122 -1.7 -1.0 Parvulin-like peptidyl-prolyl isomerase compare
Psest_4132 -1.7 -3.2 alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) compare
Psest_0536 -1.6 -2.2 thiamine-phosphate pyrophosphorylase compare
Psest_3112 -1.6 -5.2 electron transport complex, RnfABCDGE type, A subunit compare
Psest_3115 -1.6 -6.4 electron transport complex, RnfABCDGE type, D subunit compare
Psest_3391 -1.6 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_0532 -1.6 -5.1 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB compare
Psest_3114 -1.6 -7.6 electron transport complex, RnfABCDGE type, C subunit compare
Psest_4090 -1.6 -4.8 diaminobutyrate acetyltransferase compare
Psest_3840 -1.5 -3.2 D-lactate/glycolate dehydrogenase, FAD binding subunit GlcE (EC 1.1.99.6; EC 1.1.99.14) (from data) compare
Psest_4286 -1.5 -8.0 Glutamine synthetase compare
Psest_0959 -1.5 -2.8 Uncharacterized protein conserved in bacteria compare
Psest_4285 -1.5 -7.0 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase compare
Psest_3117 -1.5 -4.1 electron transport complex, RnfABCDGE type, E subunit compare
Psest_0030 -1.5 -1.8 Putative NADH-flavin reductase compare
Psest_0449 -1.5 -8.9 Glutamine synthetase adenylyltransferase compare
Psest_3943 -1.5 -2.7 Phosphoribosyl-AMP cyclohydrolase compare
Psest_3651 -1.5 -4.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_0575 -1.4 -0.9 HrpA-like helicases compare
Psest_0257 -1.4 -3.7 Predicted Zn-dependent peptidases compare
Psest_0529 -1.4 -7.0 Putative Mg2+ and Co2+ transporter CorC compare
Psest_0516 -1.4 -7.2 D-alanyl-D-alanine carboxypeptidase compare
Psest_4305 -1.4 -2.6 NAD-dependent aldehyde dehydrogenases compare
Psest_0292 -1.4 -2.6 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Psest_0021 -1.4 -3.2 ribosomal RNA small subunit methyltransferase RsmB compare
Psest_3767 -1.3 -3.1 tyrosine recombinase XerC compare
Psest_2037 -1.3 -5.4 uroporphyrin-III C-methyltransferase compare
Psest_2218 -1.3 -1.8 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit compare
Psest_0951 -1.3 -7.1 FAD/FMN-containing dehydrogenases compare
Psest_2744 -1.3 -1.8 Uncharacterized conserved protein compare
Psest_1496 -1.3 -1.3 Holliday junction DNA helicase, RuvA subunit compare
Psest_4288 -1.3 -8.3 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) compare
Psest_3890 -1.3 -0.9 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_1132 -1.3 -2.8 mutator mutT protein compare
Psest_1511 -1.3 -3.0 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3447 -1.3 -0.6 Uncharacterized MobA-related protein compare
Psest_3862 -1.3 -8.4 phosphoenolpyruvate-protein phosphotransferase compare
Psest_1882 -1.3 -4.7 Signal transduction histidine kinase compare
Psest_2585 -1.2 -0.9 pseudouridylate synthase I compare
Psest_3932 -1.2 -3.8 nitrogen regulation protein NR(I) compare
Psest_2716 -1.2 -2.7 ABC-type multidrug transport system, ATPase component compare
Psest_0485 -1.2 -2.3 clan AA aspartic protease, TIGR02281 family compare
Psest_2935 -1.2 -4.0 hypothetical protein compare
Psest_1868 -1.2 -4.0 yecA family protein compare
Psest_0958 -1.2 -5.5 Oligoketide cyclase/lipid transport protein compare
Psest_2114 -1.2 -4.2 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_0857 -1.2 -1.1 Membrane transporters of cations and cationic drugs compare
Psest_0347 -1.2 -8.3 large component of pyruvate/D-alanine transporter (actP-like) (from data) compare
Psest_4396 -1.2 -4.3 Site-specific recombinases, DNA invertase Pin homologs compare
Psest_3761 -1.2 -1.6 Transcription elongation factor compare
Psest_4325 -1.2 -1.3 hypothetical protein compare
Psest_0115 -1.1 -1.0 Predicted integral membrane protein compare
Psest_3979 -1.1 -1.0 Fructose-2,6-bisphosphatase compare
Psest_4001 -1.1 -2.8 acetylornithine deacetylase (ArgE) compare
Psest_1488 -1.1 -8.4 outer membrane porin, OprD family. compare
Psest_4042 -1.1 -1.6 hypothetical protein compare
Psest_2939 -1.1 -2.8 Predicted membrane protein compare
Psest_2748 -1.1 -1.3 Transcriptional regulator compare
Psest_3843 -1.1 -6.1 4-hydroxybenzoate synthetase (chorismate lyase) compare
Psest_1475 -1.1 -2.4 Uncharacterized protein conserved in bacteria compare
Psest_4092 -1.1 -5.9 Ectoine synthase. compare
Psest_1677 -1.1 -1.7 Protein-tyrosine-phosphatase compare
Psest_1542 -1.1 -3.3 Uncharacterized proteins, homologs of lactam utilization protein B compare
Psest_0507 -1.1 -3.3 Uncharacterized membrane-associated protein compare
Psest_0848 -1.1 -2.8 hypothetical protein compare
Psest_1424 -1.1 -1.2 Lipoate-protein ligase A compare
Psest_1226 -1.0 -2.3 hypothetical protein compare
Psest_4339 -1.0 -3.8 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog compare
Psest_2786 -1.0 -1.0 Domain of unknown function (DUF3597). compare
Psest_1691 -1.0 -2.9 aminodeoxychorismate lyase compare
Psest_2460 -1.0 -1.4 hypothetical protein compare
Psest_0147 -1.0 -4.2 Acetyltransferase, GNAT family. compare
Psest_3839 -1.0 -2.6 D-lactate/glycolate dehydrogenase, iron-sulfur subunit GlcF (EC 1.1.99.6; EC 1.1.99.14) (from data) compare


Specific Phenotypes

For 19 genes in this experiment

For stress Sodium Chloride in Pseudomonas stutzeri RCH2

For stress Sodium Chloride across organisms