Experiment set5S69 for Phocaeicola vulgatus CL09T03C04

Compare to:

diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5

Genes with specific phenotypes:

  gene name fitness t score description  
HMPREF1058_RS11875 -4.6 -12.9 hypothetical protein compare
HMPREF1058_RS16425 -2.3 -15.7 TonB-dependent receptor compare
HMPREF1058_RS01170 -2.1 -9.4 ABC transporter permease compare
HMPREF1058_RS01145 -2.0 -5.5 sigma-54-dependent Fis family transcriptional regulator compare
HMPREF1058_RS12230 -2.0 -10.6 glycoside hydrolase compare
HMPREF1058_RS15805 -1.9 -5.9 PAS domain-containing protein compare
HMPREF1058_RS10795 -1.8 -9.7 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
HMPREF1058_RS00085 -1.6 -7.8 glycoside hydrolase family 88 protein compare
HMPREF1058_RS16430 -1.5 -5.5 FecR domain-containing protein compare
HMPREF1058_RS07825 -1.5 -8.7 DUF4221 family protein compare
HMPREF1058_RS08695 -1.5 -10.2 RagB/SusD family nutrient uptake outer membrane protein compare
HMPREF1058_RS02950 -1.5 -5.7 adenylyl-sulfate kinase compare
HMPREF1058_RS02935 -1.3 -6.5 sulfotransferase compare
HMPREF1058_RS11260 -1.2 -6.5 arylsulfatase compare
HMPREF1058_RS02965 -1.2 -6.0 BamA/TamA family outer membrane protein compare
HMPREF1058_RS02940 -1.2 -5.7 sulfate adenylyltransferase subunit CysN compare
HMPREF1058_RS07115 -1.1 -5.9 TolC family protein compare
HMPREF1058_RS13030 +1.3 8.9 TonB-dependent receptor compare


Specific phenotypes for mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm across organisms