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    • Experiment set5S58 for Phocaeicola vulgatus CL09T03C04

    Compare to:

    diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4

    Genes with specific phenotypes:

      gene name fitness t score description  
    HMPREF1058_RS11875 -3.6 -14.0 hypothetical protein compare
    HMPREF1058_RS00085 -2.2 -10.9 glycoside hydrolase family 88 protein compare
    HMPREF1058_RS16425 -2.0 -11.9 TonB-dependent receptor compare
    HMPREF1058_RS01145 -1.9 -6.0 sigma-54-dependent Fis family transcriptional regulator compare
    HMPREF1058_RS01770 -1.9 -5.7 porin compare
    HMPREF1058_RS16435 -1.8 -6.2 RNA polymerase sigma-70 factor compare
    HMPREF1058_RS01170 -1.7 -8.1 ABC transporter permease compare
    HMPREF1058_RS12230 -1.6 -6.6 glycoside hydrolase compare
    HMPREF1058_RS08695 -1.5 -10.1 RagB/SusD family nutrient uptake outer membrane protein compare
    HMPREF1058_RS07825 -1.5 -8.6 DUF4221 family protein compare
    HMPREF1058_RS07405 -1.4 -5.4 sialate O-acetylesterase compare
    HMPREF1058_RS01140 -1.3 -5.8 ATP-binding protein compare
    HMPREF1058_RS10760 -1.2 -6.5 sulfatase compare
    HMPREF1058_RS08700 -1.2 -6.6 SusC/RagA family TonB-linked outer membrane protein compare
    HMPREF1058_RS13030 +1.5 8.6 TonB-dependent receptor compare


    Specific phenotypes for mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm across organisms