Experiment set5S575 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Flavobacterium anhuiense SO6b

200 most important genes:

  gene name fitness t score description  
MPMX20_04530 -4.5 -16.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04489 -4.3 -12.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_01370 -4.1 -2.8 Peptidoglycan-associated lipoprotein compare
MPMX20_00105 -4.0 -16.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02591 -3.9 -5.4 DNA-binding protein H-NS compare
MPMX20_03019 -3.9 -10.2 hypothetical protein compare
MPMX20_03154 -3.7 -7.5 Inner membrane protein YejM compare
MPMX20_00110 -3.7 -13.7 hypothetical protein compare
MPMX20_03020 -3.6 -10.3 hypothetical protein compare
MPMX20_01357 -3.6 -5.4 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_00109 -3.6 -16.8 hypothetical protein compare
MPMX20_01950 -3.3 -2.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00108 -3.3 -21.5 hypothetical protein compare
MPMX20_03986 -3.3 -4.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02768 -3.3 -2.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03396 -3.3 -5.0 Nucleoside diphosphate kinase compare
MPMX20_01020 -3.2 -1.7 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_01369 -3.1 -2.2 Tol-Pal system protein TolB compare
MPMX20_03018 -3.1 -3.7 hypothetical protein compare
MPMX20_03209 -3.1 -2.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_01334 -3.0 -8.9 Phosphoglucomutase compare
MPMX20_01869 -2.9 -6.8 Succinylglutamate desuccinylase compare
MPMX20_01367 -2.9 -2.8 Tol-Pal system protein TolR compare
MPMX20_01368 -2.9 -2.8 hypothetical protein compare
MPMX20_04443 -2.9 -2.8 Sec-independent protein translocase protein TatB compare
MPMX20_04768 -2.9 -2.0 hypothetical protein compare
MPMX20_01352 -2.8 -6.6 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03017 -2.8 -12.4 hypothetical protein compare
MPMX20_01366 -2.7 -1.9 Tol-Pal system protein TolQ compare
MPMX20_04440 -2.7 -1.8 Transcription antitermination protein RfaH compare
MPMX20_04140 -2.7 -3.7 Malate dehydrogenase compare
MPMX20_03021 -2.7 -6.3 hypothetical protein compare
MPMX20_04375 -2.7 -7.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04442 -2.6 -3.1 Sec-independent protein translocase protein TatC compare
MPMX20_04137 -2.6 -3.9 Inner membrane protein YhcB compare
MPMX20_02767 -2.6 -3.5 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02672 -2.5 -12.4 hypothetical protein compare
MPMX20_01351 -2.5 -3.4 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00419 -2.5 -8.0 Aspartate ammonia-lyase compare
MPMX20_04650 -2.5 -1.7 tRNA modification GTPase MnmE compare
MPMX20_03264 -2.5 -4.9 Chorismate synthase compare
MPMX20_02929 -2.5 -3.1 hypothetical protein compare
MPMX20_03756 -2.5 -4.4 FAD assembly factor SdhE compare
MPMX20_01350 -2.5 -4.0 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01019 -2.4 -5.8 Protoheme IX farnesyltransferase compare
MPMX20_03016 -2.4 -18.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01813 -2.4 -13.4 hypothetical protein compare
MPMX20_00998 -2.4 -3.3 Sec translocon accessory complex subunit YajC compare
MPMX20_00197 -2.4 -1.5 tRNA-Tyr compare
MPMX20_01349 -2.4 -4.3 Citrate synthase compare
MPMX20_02918 -2.3 -6.1 hypothetical protein compare
MPMX20_03213 -2.3 -5.6 NADH-quinone oxidoreductase subunit G compare
MPMX20_04377 -2.3 -8.4 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01867 -2.3 -7.9 N-succinylglutamate 5-semialdehyde dehydrogenase compare
MPMX20_04444 -2.3 -1.8 Sec-independent protein translocase protein TatA compare
MPMX20_03015 -2.3 -16.8 Phosphoglucosamine mutase compare
MPMX20_03218 -2.2 -2.2 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03215 -2.2 -2.1 NADH-quinone oxidoreductase subunit E compare
MPMX20_01356 -2.2 -5.0 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02919 -2.2 -4.9 hypothetical protein compare
MPMX20_03211 -2.2 -3.0 NADH-quinone oxidoreductase subunit I compare
MPMX20_03354 -2.2 -6.1 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00111 -2.2 -11.8 hypothetical protein compare
MPMX20_02997 -2.1 -6.3 Exodeoxyribonuclease I compare
MPMX20_02896 -2.1 -12.0 Lysozyme RrrD compare
MPMX20_01355 -2.1 -0.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01022 -2.1 -8.3 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_04518 -2.1 -3.9 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_03214 -2.0 -5.5 NADH-quinone oxidoreductase subunit F compare
MPMX20_00831 -2.0 -5.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_00136 -2.0 -1.1 hypothetical protein compare
MPMX20_04141 -2.0 -4.6 Arginine repressor compare
MPMX20_00570 -2.0 -10.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01607 -2.0 -4.2 Outer membrane protein A compare
MPMX20_01846 -2.0 -3.5 hypothetical protein compare
MPMX20_03022 -2.0 -1.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02147 -2.0 -6.8 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_04242 -2.0 -2.4 hypothetical protein compare
MPMX20_03208 -2.0 -4.4 NADH-quinone oxidoreductase subunit L compare
MPMX20_03385 -2.0 -4.9 hypothetical protein compare
MPMX20_02020 -2.0 -10.0 Mannose-6-phosphate isomerase compare
MPMX20_03095 -2.0 -1.9 hypothetical protein compare
MPMX20_04483 -2.0 -1.4 Lipid III flippase compare
MPMX20_01097 -2.0 -5.0 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04639 -2.0 -1.3 Phosphate-binding protein PstS compare
MPMX20_03216 -1.9 -7.1 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01354 -1.9 -1.3 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03409 -1.9 -1.9 Iron-binding protein IscA compare
MPMX20_03210 -1.9 -3.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_02879 -1.9 -4.1 hypothetical protein compare
MPMX20_03206 -1.9 -5.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_00106 -1.8 -1.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03153 -1.8 -2.0 hypothetical protein compare
MPMX20_01616 -1.8 -1.4 Heat shock protein HspQ compare
MPMX20_02897 -1.8 -4.3 hypothetical protein compare
MPMX20_04306 -1.8 -4.3 Glycerol-3-phosphate regulon repressor compare
MPMX20_02903 -1.8 -3.2 hypothetical protein compare
MPMX20_04465 -1.8 -3.6 Tyrosine recombinase XerC compare
MPMX20_02927 -1.8 -8.1 hypothetical protein compare
MPMX20_02920 -1.8 -5.0 hypothetical protein compare
MPMX20_01567 -1.7 -5.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03440 -1.7 -2.3 Elongation factor 4 compare
MPMX20_04028 -1.7 -1.5 hypothetical protein compare
MPMX20_03390 -1.7 -4.9 Outer membrane protein assembly factor BamB compare
MPMX20_01972 -1.7 -1.3 tRNA-Val compare
MPMX20_02882 -1.7 -7.8 hypothetical protein compare
MPMX20_03355 -1.7 -6.8 Phosphoribosylglycinamide formyltransferase compare
MPMX20_01023 -1.7 -10.0 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_01866 -1.7 -2.8 Arginine N-succinyltransferase compare
MPMX20_04466 -1.7 -3.5 hypothetical protein compare
MPMX20_01552 -1.7 -2.0 hypothetical protein compare
MPMX20_00226 -1.7 -5.1 Bifunctional purine biosynthesis protein PurH compare
MPMX20_02902 -1.7 -7.4 Serine/threonine-protein phosphatase 1 compare
MPMX20_04626 -1.7 -2.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00102 -1.6 -1.1 hypothetical protein compare
MPMX20_02917 -1.6 -3.5 hypothetical protein compare
MPMX20_02866 -1.6 -10.7 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_01365 -1.6 -3.8 Acyl-CoA thioester hydrolase YbgC compare
MPMX20_04303 -1.6 -8.1 4-alpha-glucanotransferase compare
MPMX20_02886 -1.6 -8.6 hypothetical protein compare
MPMX20_03212 -1.6 -3.7 NADH-quinone oxidoreductase subunit H compare
MPMX20_03629 -1.6 -3.0 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_01504 -1.6 -6.8 Arginine ABC transporter permease protein ArtM compare
MPMX20_01865 -1.6 -8.3 Succinylornithine transaminase compare
MPMX20_04105 -1.6 -2.6 Lipopolysaccharide export system protein LptC compare
MPMX20_03247 -1.6 -3.9 Amidophosphoribosyltransferase compare
MPMX20_01507 -1.6 -6.0 Arginine transport ATP-binding protein ArtP compare
MPMX20_02867 -1.6 -8.1 hypothetical protein compare
MPMX20_01586 -1.6 -5.7 Aspartate aminotransferase compare
MPMX20_02227 -1.6 -7.6 hypothetical protein compare
MPMX20_02877 -1.6 -7.0 hypothetical protein compare
MPMX20_00107 -1.6 -4.6 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_02888 -1.6 -4.8 hypothetical protein compare
MPMX20_02899 -1.5 -6.2 hypothetical protein compare
MPMX20_01868 -1.5 -7.3 N-succinylarginine dihydrolase compare
MPMX20_00801 -1.5 -2.3 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_04463 -1.5 -4.0 DNA helicase II compare
MPMX20_01765 -1.5 -3.8 Ribonuclease E compare
MPMX20_04730 -1.5 -7.6 hypothetical protein compare
MPMX20_01942 -1.5 -3.9 HTH-type transcriptional repressor BluR compare
MPMX20_03217 -1.5 -3.0 NADH-quinone oxidoreductase subunit B compare
MPMX20_02885 -1.5 -6.9 hypothetical protein compare
MPMX20_02901 -1.5 -7.3 hypothetical protein compare
MPMX20_01333 -1.5 -3.9 Negative modulator of initiation of replication compare
MPMX20_02876 -1.5 -5.2 hypothetical protein compare
MPMX20_04374 -1.5 -3.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_01098 -1.5 -3.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_03338 -1.5 -2.8 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_02875 -1.5 -9.9 hypothetical protein compare
MPMX20_02590 -1.5 -9.2 Thymidine kinase compare
MPMX20_01584 -1.5 -7.7 hypothetical protein compare
MPMX20_01542 -1.5 -2.7 Cold shock-like protein CspD compare
MPMX20_04038 -1.5 -3.8 Glucitol operon repressor compare
MPMX20_00740 -1.5 -3.1 Carbamoyl-phosphate synthase large chain compare
MPMX20_02873 -1.5 -5.8 hypothetical protein compare
MPMX20_00116 -1.5 -5.8 L-threonine 3-dehydrogenase compare
MPMX20_02891 -1.5 -7.8 hypothetical protein compare
MPMX20_02893 -1.4 -3.5 hypothetical protein compare
MPMX20_02021 -1.4 -5.0 Fumarate hydratase class I, aerobic compare
MPMX20_00225 -1.4 -4.7 Phosphoribosylamine--glycine ligase compare
MPMX20_03509 -1.4 -1.1 hypothetical protein compare
MPMX20_02878 -1.4 -6.8 hypothetical protein compare
MPMX20_00455 -1.4 -6.6 Modulator of FtsH protease HflK compare
MPMX20_02892 -1.4 -5.3 hypothetical protein compare
MPMX20_02905 -1.4 -5.6 hypothetical protein compare
MPMX20_02098 -1.4 -5.7 HTH-type transcriptional repressor RspR compare
MPMX20_02870 -1.4 -10.5 hypothetical protein compare
MPMX20_02908 -1.4 -7.3 hypothetical protein compare
MPMX20_02863 -1.4 -9.1 hypothetical protein compare
MPMX20_02884 -1.4 -7.8 hypothetical protein compare
MPMX20_03742 -1.4 -4.1 HTH-type transcriptional regulator GalR compare
MPMX20_03308 -1.4 -3.7 Cysteine synthase A compare
MPMX20_04119 -1.4 -0.9 DNA polymerase III subunit chi compare
MPMX20_03479 -1.4 -1.6 30S ribosomal protein S16 compare
MPMX20_01682 -1.4 -5.4 Lactose operon repressor compare
MPMX20_00514 -1.4 -2.6 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_02593 -1.4 -7.7 Regulator of RpoS compare
MPMX20_03763 -1.4 -3.0 Glycine cleavage system H protein compare
MPMX20_03376 -1.4 -4.4 HTH-type transcriptional regulator MurR compare
MPMX20_01021 -1.3 -2.9 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_03010 -1.3 -1.3 UDP-glucose 4-epimerase compare
MPMX20_02871 -1.3 -5.3 hypothetical protein compare
MPMX20_02880 -1.3 -7.6 hypothetical protein compare
MPMX20_03999 -1.3 -6.5 Serine/threonine transporter SstT compare
MPMX20_04136 -1.3 -7.0 Cell division protein ZapE compare
MPMX20_02907 -1.3 -6.1 hypothetical protein compare
MPMX20_00807 -1.3 -1.6 Pyruvate dehydrogenase E1 component compare
MPMX20_02149 -1.3 -3.1 3-hydroxyadipyl-CoA dehydrogenase compare
MPMX20_02894 -1.3 -4.3 hypothetical protein compare
MPMX20_01837 -1.3 -1.6 hypothetical protein compare
MPMX20_02861 -1.3 -8.0 hypothetical protein compare
MPMX20_04276 -1.3 -2.1 DNA adenine methylase compare
MPMX20_02889 -1.3 -8.9 hypothetical protein compare
MPMX20_01029 -1.3 -0.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_03753 -1.3 -3.6 Tyrosine recombinase XerD compare
MPMX20_01587 -1.3 -6.0 Outer membrane porin F compare
MPMX20_02477 -1.3 -2.1 Peptide transport system ATP-binding protein SapD compare
MPMX20_03248 -1.3 -2.9 Colicin V production protein compare
MPMX20_02478 -1.3 -3.4 Putrescine export system ATP-binding protein SapF compare
MPMX20_01741 -1.3 -1.5 Dihydroorotase compare


Specific Phenotypes

For 4 genes in this experiment

For mixed community Mixed culture; Flavobacterium anhuiense SO6b 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Flavobacterium anhuiense SO6b 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms