Experiment set5S567 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Microbacterium jejuense SAI_031

200 most important genes:

  gene name fitness t score description  
MPMX20_04530 -4.9 -14.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03986 -4.9 -3.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04489 -4.1 -13.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02591 -3.9 -5.9 DNA-binding protein H-NS compare
MPMX20_01357 -3.9 -5.3 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_04374 -3.6 -4.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03211 -3.6 -2.5 NADH-quinone oxidoreductase subunit I compare
MPMX20_03019 -3.4 -13.7 hypothetical protein compare
MPMX20_00109 -3.4 -17.2 hypothetical protein compare
MPMX20_00105 -3.4 -16.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_01334 -3.4 -8.6 Phosphoglucomutase compare
MPMX20_01950 -3.3 -2.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04768 -3.3 -2.3 hypothetical protein compare
MPMX20_04443 -3.2 -3.1 Sec-independent protein translocase protein TatB compare
MPMX20_00110 -3.2 -15.4 hypothetical protein compare
MPMX20_01020 -3.1 -1.7 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_03396 -3.1 -5.2 Nucleoside diphosphate kinase compare
MPMX20_03020 -3.1 -9.8 hypothetical protein compare
MPMX20_03154 -3.1 -8.2 Inner membrane protein YejM compare
MPMX20_03153 -3.0 -1.7 hypothetical protein compare
MPMX20_01352 -3.0 -6.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00419 -2.9 -6.5 Aspartate ammonia-lyase compare
MPMX20_01356 -2.9 -7.2 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04375 -2.9 -6.7 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01353 -2.8 -4.6 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04442 -2.8 -2.7 Sec-independent protein translocase protein TatC compare
MPMX20_03021 -2.8 -6.2 hypothetical protein compare
MPMX20_03018 -2.6 -4.7 hypothetical protein compare
MPMX20_03017 -2.6 -12.9 hypothetical protein compare
MPMX20_01368 -2.6 -3.1 hypothetical protein compare
MPMX20_03756 -2.6 -4.3 FAD assembly factor SdhE compare
MPMX20_01869 -2.6 -7.2 Succinylglutamate desuccinylase compare
MPMX20_04140 -2.6 -4.6 Malate dehydrogenase compare
MPMX20_03814 -2.5 -3.3 hypothetical protein compare
MPMX20_00108 -2.4 -16.9 hypothetical protein compare
MPMX20_00197 -2.4 -1.4 tRNA-Tyr compare
MPMX20_03264 -2.4 -4.8 Chorismate synthase compare
MPMX20_00480 -2.4 -3.2 50S ribosomal protein L9 compare
MPMX20_01367 -2.4 -3.9 Tol-Pal system protein TolR compare
MPMX20_01366 -2.3 -2.7 Tol-Pal system protein TolQ compare
MPMX20_01098 -2.3 -3.1 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04518 -2.3 -3.7 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_02997 -2.2 -6.7 Exodeoxyribonuclease I compare
MPMX20_03213 -2.2 -5.7 NADH-quinone oxidoreductase subunit G compare
MPMX20_03216 -2.2 -7.6 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02672 -2.2 -12.8 hypothetical protein compare
MPMX20_03214 -2.2 -5.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_01351 -2.2 -3.6 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03210 -2.2 -3.6 NADH-quinone oxidoreductase subunit J compare
MPMX20_00226 -2.2 -4.8 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03015 -2.2 -16.8 Phosphoglucosamine mutase compare
MPMX20_01369 -2.1 -4.9 Tol-Pal system protein TolB compare
MPMX20_01349 -2.1 -4.5 Citrate synthase compare
MPMX20_03207 -2.1 -4.0 NADH-quinone oxidoreductase subunit M compare
MPMX20_01355 -2.1 -0.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03215 -2.1 -2.0 NADH-quinone oxidoreductase subunit E compare
MPMX20_03217 -2.1 -3.2 NADH-quinone oxidoreductase subunit B compare
MPMX20_01022 -2.1 -8.2 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_01867 -2.1 -6.2 N-succinylglutamate 5-semialdehyde dehydrogenase compare
MPMX20_04377 -2.0 -8.6 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_03338 -2.0 -3.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_00136 -2.0 -1.1 hypothetical protein compare
MPMX20_01350 -2.0 -3.8 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03426 -2.0 -7.7 Phosphoribosylformylglycinamidine synthase compare
MPMX20_04483 -2.0 -1.4 Lipid III flippase compare
MPMX20_01097 -2.0 -5.0 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_04639 -2.0 -1.3 Phosphate-binding protein PstS compare
MPMX20_02576 -2.0 -2.6 Protein TonB compare
MPMX20_01005 -1.9 -2.9 Transcriptional repressor NrdR compare
MPMX20_03022 -1.9 -1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01868 -1.9 -9.5 N-succinylarginine dihydrolase compare
MPMX20_01354 -1.9 -1.3 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03218 -1.9 -1.8 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_01542 -1.9 -3.1 Cold shock-like protein CspD compare
MPMX20_03206 -1.9 -5.0 NADH-quinone oxidoreductase subunit N compare
MPMX20_03016 -1.9 -13.9 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04105 -1.9 -2.8 Lipopolysaccharide export system protein LptC compare
MPMX20_01567 -1.9 -5.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01813 -1.9 -11.9 hypothetical protein compare
MPMX20_03354 -1.9 -5.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_04650 -1.9 -2.8 tRNA modification GTPase MnmE compare
MPMX20_03267 -1.9 -2.5 Phosphohistidine phosphatase SixA compare
MPMX20_04731 -1.8 -5.7 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04137 -1.8 -3.8 Inner membrane protein YhcB compare
MPMX20_01019 -1.8 -5.4 Protoheme IX farnesyltransferase compare
MPMX20_04136 -1.8 -8.3 Cell division protein ZapE compare
MPMX20_00831 -1.8 -4.4 RNA polymerase-binding transcription factor DksA compare
MPMX20_04444 -1.8 -1.5 Sec-independent protein translocase protein TatA compare
MPMX20_00156 -1.8 -6.9 DNA-binding transcriptional repressor YiaJ compare
MPMX20_01370 -1.8 -3.1 Peptidoglycan-associated lipoprotein compare
MPMX20_02227 -1.7 -8.8 hypothetical protein compare
MPMX20_03390 -1.7 -4.9 Outer membrane protein assembly factor BamB compare
MPMX20_04141 -1.7 -4.2 Arginine repressor compare
MPMX20_01765 -1.7 -3.3 Ribonuclease E compare
MPMX20_02593 -1.7 -8.9 Regulator of RpoS compare
MPMX20_02696 -1.7 -6.2 Murein tetrapeptide carboxypeptidase compare
MPMX20_03509 -1.7 -1.5 hypothetical protein compare
MPMX20_01942 -1.7 -4.2 HTH-type transcriptional repressor BluR compare
MPMX20_04730 -1.7 -5.3 hypothetical protein compare
MPMX20_00739 -1.7 -2.0 Carbamoyl-phosphate synthase small chain compare
MPMX20_04301 -1.7 -2.2 Fe/S biogenesis protein NfuA compare
MPMX20_04306 -1.7 -4.1 Glycerol-3-phosphate regulon repressor compare
MPMX20_01587 -1.6 -6.4 Outer membrane porin F compare
MPMX20_00111 -1.6 -9.5 hypothetical protein compare
MPMX20_04626 -1.6 -2.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00102 -1.6 -1.1 hypothetical protein compare
MPMX20_00773 -1.6 -6.2 Catabolite repressor/activator compare
MPMX20_03212 -1.6 -3.6 NADH-quinone oxidoreductase subunit H compare
MPMX20_02887 -1.6 -4.9 hypothetical protein compare
MPMX20_02147 -1.6 -5.7 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_02895 -1.6 -7.4 hypothetical protein compare
MPMX20_03308 -1.5 -3.7 Cysteine synthase A compare
MPMX20_01866 -1.5 -2.9 Arginine N-succinyltransferase compare
MPMX20_00225 -1.5 -4.8 Phosphoribosylamine--glycine ligase compare
MPMX20_04440 -1.5 -1.7 Transcription antitermination protein RfaH compare
MPMX20_02020 -1.5 -6.5 Mannose-6-phosphate isomerase compare
MPMX20_03742 -1.5 -4.7 HTH-type transcriptional regulator GalR compare
MPMX20_00806 -1.5 -3.7 Pyruvate dehydrogenase complex repressor compare
MPMX20_04133 -1.5 -4.9 Stringent starvation protein A compare
MPMX20_03479 -1.5 -1.5 30S ribosomal protein S16 compare
MPMX20_02098 -1.5 -5.8 HTH-type transcriptional repressor RspR compare
MPMX20_00570 -1.4 -9.0 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01989 -1.4 -2.0 hypothetical protein compare
MPMX20_03355 -1.4 -4.1 Phosphoribosylglycinamide formyltransferase compare
MPMX20_01023 -1.4 -8.9 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_04532 -1.4 -1.6 Met repressor compare
MPMX20_03999 -1.4 -5.8 Serine/threonine transporter SstT compare
MPMX20_02919 -1.4 -4.4 hypothetical protein compare
MPMX20_00116 -1.4 -5.7 L-threonine 3-dehydrogenase compare
MPMX20_01865 -1.4 -7.1 Succinylornithine transaminase compare
MPMX20_03753 -1.4 -4.0 Tyrosine recombinase XerD compare
MPMX20_03850 -1.4 -3.1 Biopolymer transport protein ExbD compare
MPMX20_02920 -1.4 -5.6 hypothetical protein compare
MPMX20_04119 -1.4 -0.9 DNA polymerase III subunit chi compare
MPMX20_02767 -1.4 -2.8 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02768 -1.4 -2.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03443 -1.3 -4.8 Anti-sigma-E factor RseA compare
MPMX20_03208 -1.3 -3.9 NADH-quinone oxidoreductase subunit L compare
MPMX20_00106 -1.3 -2.0 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01472 -1.3 -4.2 Glutathione transport system permease protein GsiD compare
MPMX20_00740 -1.3 -3.0 Carbamoyl-phosphate synthase large chain compare
MPMX20_03435 -1.3 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_02766 -1.3 -2.0 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01741 -1.3 -1.3 Dihydroorotase compare
MPMX20_00073 -1.3 -5.7 HTH-type transcriptional regulator MlrA compare
MPMX20_04465 -1.3 -3.0 Tyrosine recombinase XerC compare
MPMX20_01607 -1.3 -2.9 Outer membrane protein A compare
MPMX20_02896 -1.2 -7.5 Lysozyme RrrD compare
MPMX20_01291 -1.2 -6.3 D-alanyl-D-alanine carboxypeptidase DacA compare
MPMX20_03247 -1.2 -3.5 Amidophosphoribosyltransferase compare
MPMX20_01504 -1.2 -4.8 Arginine ABC transporter permease protein ArtM compare
MPMX20_00807 -1.2 -1.7 Pyruvate dehydrogenase E1 component compare
MPMX20_02203 -1.2 -2.1 hypothetical protein compare
MPMX20_01926 -1.2 -7.9 hypothetical protein compare
MPMX20_01550 -1.2 -1.4 Thioredoxin reductase compare
MPMX20_00837 -1.2 -4.6 Iron(3+)-hydroxamate import ATP-binding protein FhuC compare
MPMX20_01386 -1.2 -4.3 UDP-glucose 4-epimerase compare
MPMX20_01586 -1.2 -4.9 Aspartate aminotransferase compare
MPMX20_00115 -1.2 -6.1 2-amino-3-ketobutyrate coenzyme A ligase compare
MPMX20_02885 -1.2 -4.4 hypothetical protein compare
MPMX20_01156 -1.2 -2.2 hypothetical protein compare
MPMX20_02021 -1.2 -4.7 Fumarate hydratase class I, aerobic compare
MPMX20_03678 -1.2 -1.1 tRNA-Met compare
MPMX20_04485 -1.2 -3.8 dTDP-fucosamine acetyltransferase compare
MPMX20_01323 -1.2 -5.5 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX20_03010 -1.2 -1.8 UDP-glucose 4-epimerase compare
MPMX20_03408 -1.2 -0.8 Co-chaperone protein HscB compare
MPMX20_02477 -1.2 -2.0 Peptide transport system ATP-binding protein SapD compare
MPMX20_04480 -1.2 -4.0 UDP-N-acetyl-D-mannosaminuronic acid transferase compare
MPMX20_00087 -1.2 -1.5 DNA-directed RNA polymerase subunit omega compare
MPMX20_03770 -1.2 -3.2 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_00455 -1.1 -6.1 Modulator of FtsH protease HflK compare
MPMX20_04484 -1.1 -3.8 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_04467 -1.1 -4.1 Diaminopimelate epimerase compare
MPMX20_01584 -1.1 -6.4 hypothetical protein compare
MPMX20_00456 -1.1 -4.2 Modulator of FtsH protease HflC compare
MPMX20_02888 -1.1 -4.2 hypothetical protein compare
MPMX20_04158 -1.1 -7.3 RNase E specificity factor CsrD compare
MPMX20_02907 -1.1 -5.6 hypothetical protein compare
MPMX20_03094 -1.1 -2.9 HTH-type transcriptional regulator MlrA compare
MPMX20_01275 -1.1 -1.8 hypothetical protein compare
MPMX20_03265 -1.1 -4.2 50S ribosomal protein L3 glutamine methyltransferase compare
MPMX20_03407 -1.1 -1.5 Chaperone protein HscA compare
MPMX20_02929 -1.1 -1.9 hypothetical protein compare
MPMX20_01021 -1.1 -2.5 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_02864 -1.1 -2.0 hypothetical protein compare
MPMX20_01286 -1.1 -0.9 Sec-independent protein translocase protein TatE compare
MPMX20_02897 -1.1 -2.2 hypothetical protein compare
MPMX20_03132 -1.1 -3.8 Tagatose-6-phosphate kinase compare
MPMX20_03851 -1.1 -5.2 Biopolymer transport protein ExbB compare
MPMX20_04303 -1.1 -6.4 4-alpha-glucanotransferase compare
MPMX20_00794 -1.1 -3.6 Cell division protein ZapD compare
MPMX20_04162 -1.1 -2.0 3-dehydroquinate dehydratase compare
MPMX20_03163 -1.1 -1.4 hypothetical protein compare
MPMX20_04687 -1.1 -4.1 hypothetical protein compare
MPMX20_02472 -1.1 -2.9 Phage shock protein A compare
MPMX20_02478 -1.1 -3.3 Putrescine export system ATP-binding protein SapF compare
MPMX20_01544 -1.1 -5.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX20_03864 -1.1 -3.5 Sensor protein QseC compare
MPMX20_03385 -1.1 -3.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Microbacterium jejuense SAI_031 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms